RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 COA1Q9GZY4 146 aa16.83■□□□□ 0.28
SAFB2-201ENST00000252542 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.83■□□□□ 0.285e-7■■■■■ 57.4
SAFB2-201ENST00000252542 MKRN1Q9UHC7 482 aaKnown RBP16.83■□□□□ 0.28
SAFB2-201ENST00000252542 NPHP3-ACAD11A0A0J9YXS1 232 aa16.83■□□□□ 0.28
SAFB2-201ENST00000252542 RNF225M0QZC1 329 aaPredicted RBP16.83■□□□□ 0.28
SAFB2-201ENST00000252542 GH2P01242 217 aa16.83■□□□□ 0.28
SAFB2-201ENST00000252542 MATR3P43243 847 aaKnown RBP eCLIP16.83■□□□□ 0.28
SAFB2-201ENST00000252542 PDE4CQ08493 712 aa16.83■□□□□ 0.28
SAFB2-201ENST00000252542 NCAPH2Q6IBW4 605 aa16.83■□□□□ 0.28
SAFB2-201ENST00000252542 DDX39AO00148 427 aaKnown RBP16.82■□□□□ 0.28
SAFB2-201ENST00000252542 ALDH1B1P30837 517 aa16.82■□□□□ 0.28
SAFB2-201ENST00000252542 MRPS25P82663 173 aaKnown RBP16.82■□□□□ 0.28
SAFB2-201ENST00000252542 ICA1Q05084 483 aa16.82■□□□□ 0.28
SAFB2-201ENST00000252542 GLIS3Q8NEA6 775 aa16.82■□□□□ 0.28
SAFB2-201ENST00000252542 GDAP1L1Q96MZ0 367 aa16.82■□□□□ 0.28
SAFB2-201ENST00000252542 NLRC4Q9NPP4 1024 aa16.82■□□□□ 0.28
SAFB2-201ENST00000252542 HOMER2Q9NSB8 354 aa16.82■□□□□ 0.28
SAFB2-201ENST00000252542 CALCOCO1Q9P1Z2 691 aa16.82■□□□□ 0.28
SAFB2-201ENST00000252542 LUC7L2Q9Y383 392 aaKnown RBP16.82■□□□□ 0.28
SAFB2-201ENST00000252542 TNNT3P45378 269 aaPredicted RBP16.82■□□□□ 0.28
SAFB2-201ENST00000252542 ZNF658Q5TYW1 1059 aaPredicted RBP16.82■□□□□ 0.28
SAFB2-201ENST00000252542 PDXDC2PQ6P474 469 aa16.82■□□□□ 0.28
SAFB2-201ENST00000252542 CTAGE1Q96RT6 745 aa16.82■□□□□ 0.28
SAFB2-201ENST00000252542 CSRNP1Q96S65 589 aa16.82■□□□□ 0.28
SAFB2-201ENST00000252542 DDX25Q9UHL0 483 aaKnown RBP16.82■□□□□ 0.28
SAFB2-201ENST00000252542 ZBTB21Q9ULJ3 1066 aa16.82■□□□□ 0.28
SAFB2-201ENST00000252542 CICQ96RK0 1608 aaPredicted RBP16.82■□□□□ 0.28
SAFB2-201ENST00000252542 ECE2O60344 883 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 TRAPPC10P48553 1259 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 NR1I3Q14994 352 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 TCERG1LQ5VWI1 586 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 KIFC2Q96AC6 838 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 PCDHA12Q9UN75 941 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 KIAA1024Q9UPX6 916 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 CCP110O43303 1012 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 EPS15P42566 896 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 TDRD12Q587J7 1177 aaKnown RBP16.81■□□□□ 0.28
SAFB2-201ENST00000252542 SP8Q8IXZ3 490 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 CCDC155Q8N6L0 562 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 SFI1A8K8P3 1242 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 E9PMD0 336 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 TRAF5O00463 557 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 FGRP09769 529 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 NPR1P16066 1061 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 ADRA2BP18089 450 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 PDE6BP35913 854 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 GYS2P54840 703 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 CCDC40Q4G0X9 1142 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 TCP11X2Q5H9J9 407 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 CPXCR1Q8N123 301 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 SPATA31A6Q5VVP1 1343 aa16.81■□□□□ 0.28
SAFB2-201ENST00000252542 MYH7P12883 1935 aa16.8■□□□□ 0.28
SAFB2-201ENST00000252542 PNMA6AP0CW24 399 aaPredicted RBP16.8■□□□□ 0.28
SAFB2-201ENST00000252542 IRX5P78411 483 aaPredicted RBP16.8■□□□□ 0.28
SAFB2-201ENST00000252542 JMJD4Q9H9V9 463 aa16.8■□□□□ 0.28
SAFB2-201ENST00000252542 ZNHIT6Q9NWK9 470 aaKnown RBP16.8■□□□□ 0.28
SAFB2-201ENST00000252542 ADD3Q9UEY8 706 aaKnown RBP16.8■□□□□ 0.28
SAFB2-201ENST00000252542 NKRFO15226 690 aaKnown RBP eCLIP16.8■□□□□ 0.28
SAFB2-201ENST00000252542 ZNF18P17022 549 aa16.8■□□□□ 0.28
SAFB2-201ENST00000252542 NAALADL2Q58DX5 795 aa16.8■□□□□ 0.28
SAFB2-201ENST00000252542 HERC4Q5GLZ8 1057 aaPredicted RBP16.8■□□□□ 0.28
SAFB2-201ENST00000252542 LARGE2Q8N3Y3 721 aa16.8■□□□□ 0.28
SAFB2-201ENST00000252542 CAGE1Q8TC20 777 aa16.8■□□□□ 0.28
SAFB2-201ENST00000252542 TUBGCP2Q9BSJ2 902 aa16.8■□□□□ 0.28
SAFB2-201ENST00000252542 ZNF277Q9NRM2 450 aaPredicted RBP16.8■□□□□ 0.28
SAFB2-201ENST00000252542 GYPCP04921 128 aa16.8■□□□□ 0.28
SAFB2-201ENST00000252542 IL1R1P14778 569 aa16.8■□□□□ 0.28
SAFB2-201ENST00000252542 MRPL12P52815 198 aaKnown RBP16.8■□□□□ 0.28
SAFB2-201ENST00000252542 HNRNPH2P55795 449 aaKnown RBP16.8■□□□□ 0.28
SAFB2-201ENST00000252542 SMCR8Q8TEV9 937 aaPredicted RBP16.8■□□□□ 0.28
SAFB2-201ENST00000252542 SH2D3AQ9BRG2 576 aa16.8■□□□□ 0.28
SAFB2-201ENST00000252542 PAPPAQ13219 1627 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 PSDA5PKW4 1024 aaPredicted RBP16.79■□□□□ 0.28
SAFB2-201ENST00000252542 SORBS3O60504 671 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 PABPC4Q13310 644 aaKnown RBP eCLIP16.79■□□□□ 0.285e-7■■□□□ 11.4
SAFB2-201ENST00000252542 E2F4Q16254 413 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 KCTD19Q17RG1 926 aaPredicted RBP16.79■□□□□ 0.28
SAFB2-201ENST00000252542 QRICH1Q2TAL8 776 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 ANKRD40Q6AI12 368 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 CACNA2D4Q7Z3S7 1137 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 LRRC15Q8TF66 581 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 CUL5Q93034 780 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 AGPAT5Q9NUQ2 364 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 TMEM51Q9NW97 253 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 TMOD2Q9NZR1 351 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 TTC26A0AVF1 554 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 MYO1BO43795 1136 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 PPARDQ03181 441 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 PPP2R3AQ06190 1150 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 REXO1L1PQ8IX06 675 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 SLC35F6Q8N357 371 aa16.79■□□□□ 0.28
SAFB2-201ENST00000252542 CNOT6LQ96LI5 555 aaKnown RBP16.79■□□□□ 0.28
SAFB2-201ENST00000252542 STX10O60499 249 aa16.78■□□□□ 0.28
SAFB2-201ENST00000252542 AMPD3Q01432 767 aa16.78■□□□□ 0.28
SAFB2-201ENST00000252542 MASTLQ96GX5 879 aa16.78■□□□□ 0.28
SAFB2-201ENST00000252542 RAB34Q9BZG1 259 aa16.78■□□□□ 0.28
SAFB2-201ENST00000252542 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.78■□□□□ 0.28
SAFB2-201ENST00000252542 A0A1B0GTH6 734 aa16.78■□□□□ 0.28
SAFB2-201ENST00000252542 POTEB3A0JP26 581 aa16.78■□□□□ 0.28
SAFB2-201ENST00000252542 SPDYE3A6NKU9 549 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms