RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 PDHBP11177 359 aa15.17■□□□□ 0.02
APOBEC3A-201ENST00000249116 CSF2RAP15509 400 aa15.17■□□□□ 0.02
APOBEC3A-201ENST00000249116 NT5C2P49902 561 aa15.17■□□□□ 0.02
APOBEC3A-201ENST00000249116 ALDH5A1P51649 535 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3A-201ENST00000249116 ITGA7Q13683 1181 aa15.17■□□□□ 0.02
APOBEC3A-201ENST00000249116 B4GALNT3Q6L9W6 998 aa15.17■□□□□ 0.02
APOBEC3A-201ENST00000249116 PSRC1Q6PGN9 363 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3A-201ENST00000249116 SLC43A3Q8NBI5 491 aa15.17■□□□□ 0.02
APOBEC3A-201ENST00000249116 MAFAQ8NHW3 353 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3A-201ENST00000249116 ESR2Q92731 530 aa15.17■□□□□ 0.02
APOBEC3A-201ENST00000249116 NFIBO00712 420 aa15.16■□□□□ 0.02
APOBEC3A-201ENST00000249116 ZNF213O14771 459 aa15.16■□□□□ 0.02
APOBEC3A-201ENST00000249116 FOSL2P15408 326 aa15.16■□□□□ 0.02
APOBEC3A-201ENST00000249116 SDSP20132 328 aa15.16■□□□□ 0.02
APOBEC3A-201ENST00000249116 DNAJB2P25686 324 aa15.16■□□□□ 0.02
APOBEC3A-201ENST00000249116 ZNF543Q08ER8 600 aa15.16■□□□□ 0.02
APOBEC3A-201ENST00000249116 DUSP28Q4G0W2 176 aa15.16■□□□□ 0.02
APOBEC3A-201ENST00000249116 CCDC178Q5BJE1 867 aa15.16■□□□□ 0.02
APOBEC3A-201ENST00000249116 TMEM240Q5SV17 173 aa15.16■□□□□ 0.02
APOBEC3A-201ENST00000249116 CHD1LQ86WJ1 897 aa15.16■□□□□ 0.02
APOBEC3A-201ENST00000249116 PURBQ96QR8 312 aaKnown RBP15.16■□□□□ 0.02
APOBEC3A-201ENST00000249116 DDX49Q9Y6V7 483 aaKnown RBP15.16■□□□□ 0.02
APOBEC3A-201ENST00000249116 MCM3APO60318 1980 aa15.16■□□□□ 0.02
APOBEC3A-201ENST00000249116 B4DLN1 442 aa15.15■□□□□ 0.02
APOBEC3A-201ENST00000249116 CALML3P27482 149 aa15.15■□□□□ 0.02
APOBEC3A-201ENST00000249116 MRPL12P52815 198 aaKnown RBP15.15■□□□□ 0.02
APOBEC3A-201ENST00000249116 GPATCH4Q5T3I0 446 aaKnown RBP15.15■□□□□ 0.02
APOBEC3A-201ENST00000249116 RNF207Q6ZRF8 634 aa15.15■□□□□ 0.02
APOBEC3A-201ENST00000249116 TBC1D10CQ8IV04 446 aa15.15■□□□□ 0.02
APOBEC3A-201ENST00000249116 MTIF3Q9H2K0 278 aaKnown RBP15.15■□□□□ 0.02
APOBEC3A-201ENST00000249116 HIPK3Q9H422 1215 aa15.15■□□□□ 0.02
APOBEC3A-201ENST00000249116 POLR3EQ9NVU0 708 aa15.15■□□□□ 0.02
APOBEC3A-201ENST00000249116 WDR19Q8NEZ3 1342 aa15.14■□□□□ 0.01
APOBEC3A-201ENST00000249116 LRRC37A2A6NM11 1700 aa15.14■□□□□ 0.01
APOBEC3A-201ENST00000249116 HIP1O00291 1037 aa15.14■□□□□ 0.01
APOBEC3A-201ENST00000249116 SNHG28P0DPA3 235 aa15.14■□□□□ 0.01
APOBEC3A-201ENST00000249116 CYP2C18P33260 490 aa15.14■□□□□ 0.01
APOBEC3A-201ENST00000249116 ZNF365Q70YC5 407 aa15.14■□□□□ 0.01
APOBEC3A-201ENST00000249116 C16orf59Q7L2K0 433 aa15.14■□□□□ 0.01
APOBEC3A-201ENST00000249116 IQCA1Q86XH1 822 aa15.14■□□□□ 0.01
APOBEC3A-201ENST00000249116 DGKHQ86XP1 1220 aa15.14■□□□□ 0.01
APOBEC3A-201ENST00000249116 TIFAQ96CG3 184 aa15.14■□□□□ 0.01
APOBEC3A-201ENST00000249116 WDR11Q9BZH6 1224 aa15.14■□□□□ 0.01
APOBEC3A-201ENST00000249116 OSBPL3Q9H4L5 887 aa15.14■□□□□ 0.01
APOBEC3A-201ENST00000249116 IL23AQ9NPF7 189 aa15.14■□□□□ 0.01
APOBEC3A-201ENST00000249116 DIAPH3Q9NSV4 1193 aa15.14■□□□□ 0.01
APOBEC3A-201ENST00000249116 NEFLP07196 543 aa15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 ACRP10323 421 aa15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 CPT1AP50416 773 aa15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 NUCB1Q02818 461 aa15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 PDE4DQ08499 809 aa15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 BRDTQ58F21 947 aaPredicted RBP15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 RASIP1Q5U651 963 aa15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 SLC30A10Q6XR72 485 aa15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 PLEKHM2Q8IWE5 1019 aa15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 DNERQ8NFT8 737 aa15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 CLEC4DQ8WXI8 215 aa15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 ZKSCAN3Q9BRR0 538 aa15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 ZNF576Q9H609 170 aa15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 GPHNQ9NQX3 736 aaPredicted RBP15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 NEDD4P46934 1319 aa15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 RAD50Q92878 1312 aa15.13■□□□□ 0.01
APOBEC3A-201ENST00000249116 RBM47A0AV96 593 aaKnown RBP15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 NKRFO15226 690 aaKnown RBP eCLIP15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 B4GALT4O60513 344 aa15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 FGBP02675 491 aa15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 PTGS1P23219 599 aa15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 PSMC6P62333 389 aa15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 RPS6P62753 249 aaKnown RBP15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 GRIN2CQ14957 1233 aa15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 TMEM63BQ5T3F8 832 aa15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 CWC27Q6UX04 472 aaKnown RBP15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 OR6J1Q8NGC5 347 aa15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 HERVK_113Q902F9 699 aa15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 COL25A1Q9BXS0 654 aaPredicted RBP15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 KAT14Q9H8E8 782 aa15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 COL6A3P12111 3177 aa15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 GRIN2DO15399 1336 aa15.12■□□□□ 0.01
APOBEC3A-201ENST00000249116 KDM4AO75164 1064 aa15.11■□□□□ 0.01
APOBEC3A-201ENST00000249116 MYL3P08590 195 aa15.11■□□□□ 0.01
APOBEC3A-201ENST00000249116 SUPT20HL2P0C7V6 817 aa15.11■□□□□ 0.01
APOBEC3A-201ENST00000249116 GOLGA8HP0CJ92 632 aa15.11■□□□□ 0.01
APOBEC3A-201ENST00000249116 PPP2R5BQ15173 497 aa15.11■□□□□ 0.01
APOBEC3A-201ENST00000249116 RAB30Q15771 203 aa15.11■□□□□ 0.01
APOBEC3A-201ENST00000249116 USH1GQ495M9 461 aa15.11■□□□□ 0.01
APOBEC3A-201ENST00000249116 RPUSD2Q8IZ73 545 aaKnown RBP15.11■□□□□ 0.01
APOBEC3A-201ENST00000249116 PNMA1Q8ND90 353 aa15.11■□□□□ 0.01
APOBEC3A-201ENST00000249116 NOC4LQ9BVI4 516 aaKnown RBP15.11■□□□□ 0.01
APOBEC3A-201ENST00000249116 PBX4Q9BYU1 374 aa15.11■□□□□ 0.01
APOBEC3A-201ENST00000249116 MAF1Q9H063 256 aa15.11■□□□□ 0.01
APOBEC3A-201ENST00000249116 TRPV6Q9H1D0 765 aa15.11■□□□□ 0.01
APOBEC3A-201ENST00000249116 CCL23P55773 120 aa15.1■□□□□ 0.01
APOBEC3A-201ENST00000249116 PURAQ00577 322 aaKnown RBP15.1■□□□□ 0.01
APOBEC3A-201ENST00000249116 IMMTQ16891 758 aaKnown RBP15.1■□□□□ 0.01
APOBEC3A-201ENST00000249116 RGS22Q8NE09 1264 aa15.1■□□□□ 0.01
APOBEC3A-201ENST00000249116 SCFD2Q8WU76 684 aa15.1■□□□□ 0.01
APOBEC3A-201ENST00000249116 GAS2L1Q99501 681 aaPredicted RBP15.1■□□□□ 0.01
APOBEC3A-201ENST00000249116 MTG1Q9BT17 334 aaPredicted RBP15.1■□□□□ 0.01
APOBEC3A-201ENST00000249116 DSCC1Q9BVC3 393 aa15.1■□□□□ 0.01
APOBEC3A-201ENST00000249116 UBA5Q9GZZ9 404 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms