RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 GUCD1Q96NT3 240 aa18.91■□□□□ 0.62
CLPP-201ENST00000245816 ESYT1Q9BSJ8 1104 aa18.91■□□□□ 0.62
CLPP-201ENST00000245816 SENP2Q9HC62 589 aa18.91■□□□□ 0.62
CLPP-201ENST00000245816 ELP1O95163 1332 aa18.91■□□□□ 0.62
CLPP-201ENST00000245816 EYSQ5T1H1 3165 aa18.9■□□□□ 0.62
CLPP-201ENST00000245816 RBM47A0AV96 593 aaKnown RBP18.9■□□□□ 0.62
CLPP-201ENST00000245816 DYNC1LI2O43237 492 aaPredicted RBP18.9■□□□□ 0.62
CLPP-201ENST00000245816 CASC1Q6TDU7 716 aa18.9■□□□□ 0.62
CLPP-201ENST00000245816 CXCL17Q6UXB2 119 aa18.9■□□□□ 0.62
CLPP-201ENST00000245816 ZSCAN10Q96SZ4 725 aaPredicted RBP18.9■□□□□ 0.62
CLPP-201ENST00000245816 TMEM39AQ9NV64 488 aa18.9■□□□□ 0.62
CLPP-201ENST00000245816 COL20A1Q9P218 1284 aa18.9■□□□□ 0.62
CLPP-201ENST00000245816 PRKAG2Q9UGJ0 569 aa18.9■□□□□ 0.62
CLPP-201ENST00000245816 ARVCFO00192 962 aa18.89■□□□□ 0.61
CLPP-201ENST00000245816 CD4P01730 458 aa18.89■□□□□ 0.61
CLPP-201ENST00000245816 EDNRBP24530 442 aa18.89■□□□□ 0.61
CLPP-201ENST00000245816 RPS6P62753 249 aaKnown RBP18.89■□□□□ 0.61
CLPP-201ENST00000245816 TRDNQ13061 729 aa18.89■□□□□ 0.61
CLPP-201ENST00000245816 TLK2Q86UE8 772 aa18.89■□□□□ 0.61
CLPP-201ENST00000245816 SKAP1Q86WV1 359 aa18.89■□□□□ 0.61
CLPP-201ENST00000245816 FAM126BQ8IXS8 530 aa18.89■□□□□ 0.61
CLPP-201ENST00000245816 ADGRF4Q8IZF3 695 aa18.89■□□□□ 0.61
CLPP-201ENST00000245816 STAG2Q8N3U4 1231 aa18.89■□□□□ 0.61
CLPP-201ENST00000245816 NUP133Q8WUM0 1156 aa18.89■□□□□ 0.61
CLPP-201ENST00000245816 VWCEQ96DN2 955 aa18.89■□□□□ 0.61
CLPP-201ENST00000245816 WDR19Q8NEZ3 1342 aa18.89■□□□□ 0.61
CLPP-201ENST00000245816 OPLAHO14841 1288 aa18.88■□□□□ 0.61
CLPP-201ENST00000245816 CYP21A2P08686 494 aa18.88■□□□□ 0.61
CLPP-201ENST00000245816 CALML3P27482 149 aa18.88■□□□□ 0.61
CLPP-201ENST00000245816 PSMC6P62333 389 aa18.88■□□□□ 0.61
CLPP-201ENST00000245816 IQSEC1Q6DN90 963 aa18.88■□□□□ 0.61
CLPP-201ENST00000245816 STOX1Q6ZVD7 989 aa18.88■□□□□ 0.61
CLPP-201ENST00000245816 JMJD4Q9H9V9 463 aa18.88■□□□□ 0.61
CLPP-201ENST00000245816 TNKSO95271 1327 aa18.88■□□□□ 0.61
CLPP-201ENST00000245816 UMODL1Q5DID0 1318 aa18.88■□□□□ 0.61
CLPP-201ENST00000245816 PTPDC1A2A3K4 754 aa18.87■□□□□ 0.61
CLPP-201ENST00000245816 PPP1R11O60927 126 aaPredicted RBP18.87■□□□□ 0.61
CLPP-201ENST00000245816 USH1GQ495M9 461 aa18.87■□□□□ 0.61
CLPP-201ENST00000245816 FAM109BQ6ICB4 259 aaPredicted RBP18.87■□□□□ 0.61
CLPP-201ENST00000245816 RNF207Q6ZRF8 634 aa18.87■□□□□ 0.61
CLPP-201ENST00000245816 PCSK9Q8NBP7 692 aaKnown RBP18.87■□□□□ 0.61
CLPP-201ENST00000245816 PPP1R13LQ8WUF5 828 aa18.87■□□□□ 0.61
CLPP-201ENST00000245816 COPS5Q92905 334 aa18.87■□□□□ 0.61
CLPP-201ENST00000245816 GLT1D1Q96MS3 346 aa18.87■□□□□ 0.61
CLPP-201ENST00000245816 FAM161BQ96MY7 647 aa18.87■□□□□ 0.61
CLPP-201ENST00000245816 TTYH1Q9H313 450 aaPredicted RBP18.87■□□□□ 0.61
CLPP-201ENST00000245816 VTA1Q9NP79 307 aa18.87■□□□□ 0.61
CLPP-201ENST00000245816 UNC80Q8N2C7 3258 aa18.86■□□□□ 0.61
CLPP-201ENST00000245816 A0A0U1RQG5 324 aaPredicted RBP18.86■□□□□ 0.61
CLPP-201ENST00000245816 CDC45O75419 566 aa18.86■□□□□ 0.61
CLPP-201ENST00000245816 ARIH2O95376 493 aa18.86■□□□□ 0.61
CLPP-201ENST00000245816 TIMP1P01033 207 aa18.86■□□□□ 0.61
CLPP-201ENST00000245816 RAG1P15918 1043 aa18.86■□□□□ 0.61
CLPP-201ENST00000245816 CDC37Q16543 378 aaPredicted RBP18.86■□□□□ 0.61
CLPP-201ENST00000245816 FSCN1Q16658 493 aaKnown RBP18.86■□□□□ 0.61
CLPP-201ENST00000245816 DUSP28Q4G0W2 176 aa18.86■□□□□ 0.61
CLPP-201ENST00000245816 GPATCH4Q5T3I0 446 aaKnown RBP18.86■□□□□ 0.61
CLPP-201ENST00000245816 NCOA7Q8NI08 942 aa18.86■□□□□ 0.61
CLPP-201ENST00000245816 UBAC1Q9BSL1 405 aa18.86■□□□□ 0.61
CLPP-201ENST00000245816 MTA3Q9BTC8 594 aa18.86■□□□□ 0.61
CLPP-201ENST00000245816 LSG1Q9H089 658 aaKnown RBP18.86■□□□□ 0.61
CLPP-201ENST00000245816 PNMA2Q9UL42 364 aa18.86■□□□□ 0.61
CLPP-201ENST00000245816 RBM8AQ9Y5S9 174 aaKnown RBP18.86■□□□□ 0.61
CLPP-201ENST00000245816 DCDC2CA8MYV0 355 aa18.85■□□□□ 0.61
CLPP-201ENST00000245816 QRICH1Q2TAL8 776 aa18.85■□□□□ 0.61
CLPP-201ENST00000245816 NOL8Q76FK4 1167 aaKnown RBP18.85■□□□□ 0.61
CLPP-201ENST00000245816 TAAR1Q96RJ0 339 aa18.85■□□□□ 0.61
CLPP-201ENST00000245816 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLPP-201ENST00000245816 KAT14Q9H8E8 782 aa18.85■□□□□ 0.61
CLPP-201ENST00000245816 MAD2L2Q9UI95 211 aa18.85■□□□□ 0.61
CLPP-201ENST00000245816 Q9Y3F1 56 aa18.85■□□□□ 0.61
CLPP-201ENST00000245816 CHD9Q3L8U1 2897 aa18.85■□□□□ 0.61
CLPP-201ENST00000245816 E7EWF7 191 aa18.84■□□□□ 0.61
CLPP-201ENST00000245816 ANTXR2P58335 489 aa18.84■□□□□ 0.61
CLPP-201ENST00000245816 FPGSQ05932 587 aa18.84■□□□□ 0.61
CLPP-201ENST00000245816 NECTIN1Q15223 517 aa18.84■□□□□ 0.61
CLPP-201ENST00000245816 MFSD5Q6N075 450 aa18.84■□□□□ 0.61
CLPP-201ENST00000245816 RGS22Q8NE09 1264 aa18.84■□□□□ 0.61
CLPP-201ENST00000245816 SYTL5Q8TDW5 730 aaPredicted RBP18.84■□□□□ 0.61
CLPP-201ENST00000245816 MTMR8Q96EF0 704 aa18.84■□□□□ 0.61
CLPP-201ENST00000245816 WDR11Q9BZH6 1224 aa18.84■□□□□ 0.61
CLPP-201ENST00000245816 TRPV6Q9H1D0 765 aa18.84■□□□□ 0.61
CLPP-201ENST00000245816 SPC25Q9HBM1 224 aa18.84■□□□□ 0.61
CLPP-201ENST00000245816 VAT1LQ9HCJ6 419 aa18.84■□□□□ 0.61
CLPP-201ENST00000245816 STXBP5LQ9Y2K9 1186 aa18.84■□□□□ 0.61
CLPP-201ENST00000245816 CSF2RAP15509 400 aa18.83■□□□□ 0.6
CLPP-201ENST00000245816 CYP2C18P33260 490 aa18.83■□□□□ 0.6
CLPP-201ENST00000245816 ITGA7Q13683 1181 aa18.83■□□□□ 0.6
CLPP-201ENST00000245816 TMEM240Q5SV17 173 aa18.83■□□□□ 0.6
CLPP-201ENST00000245816 RASIP1Q5U651 963 aa18.83■□□□□ 0.6
CLPP-201ENST00000245816 CHST3Q7LGC8 479 aa18.83■□□□□ 0.6
CLPP-201ENST00000245816 RALYLQ86SE5 291 aaKnown RBP18.83■□□□□ 0.6
CLPP-201ENST00000245816 VTI1AQ96AJ9 217 aa18.83■□□□□ 0.6
CLPP-201ENST00000245816 PPP1R12CQ9BZL4 782 aa18.83■□□□□ 0.6
CLPP-201ENST00000245816 SEMA6BQ9H3T3 888 aa18.83■□□□□ 0.6
CLPP-201ENST00000245816 GPHNQ9NQX3 736 aaPredicted RBP18.83■□□□□ 0.6
CLPP-201ENST00000245816 ADD3Q9UEY8 706 aaKnown RBP18.83■□□□□ 0.6
CLPP-201ENST00000245816 PALM3A6NDB9 673 aaPredicted RBP18.82■□□□□ 0.6
CLPP-201ENST00000245816 B4GALT4O60513 344 aa18.82■□□□□ 0.6
CLPP-201ENST00000245816 ACRP10323 421 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms