RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 USP17L11C9JVI0 530 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 USP17L18D6R9N7 530 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 USP17L22D6RA61 530 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 USP17L17D6RBQ6 530 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 USP17L19D6RCP7 530 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 USP17L20D6RJB6 530 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 STXBP3O00186 592 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 USP17L24Q0WX57 530 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 BECN2A8MW95 431 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 DYNC1I1O14576 645 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 CDC25BP30305 580 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 NAPAP54920 295 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 COG2Q14746 738 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 SLC39A14Q15043 492 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 CCDC144BQ3MJ40 725 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 CYP4F22Q6NT55 531 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 GPAT2Q6NUI2 795 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 PROCA1Q8NCQ7 364 aaPredicted RBP19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 MYRIPQ8NFW9 859 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 OXER1Q8TDS5 423 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 AGBL1Q96MI9 1066 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 ZIC5Q96T25 663 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 RAVER2Q9HCJ3 691 aaKnown RBP19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 BARHL2Q9NY43 387 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 AGTPBP1Q9UPW5 1226 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 PCDHA1Q9Y5I3 950 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 MARCKSP29966 332 aaPredicted RBP19.28■□□□□ 0.68
CDKN1A-201ENST00000244741 GTF2A2P52657 109 aa19.28■□□□□ 0.68
CDKN1A-201ENST00000244741 NLRP5P59047 1200 aa19.28■□□□□ 0.68
CDKN1A-201ENST00000244741 PRIMPOLQ96LW4 560 aa19.28■□□□□ 0.68
CDKN1A-201ENST00000244741 P2RX7Q99572 595 aaKnown RBP19.28■□□□□ 0.68
CDKN1A-201ENST00000244741 KIAA1468Q9P260 1216 aa19.28■□□□□ 0.68
CDKN1A-201ENST00000244741 ZNF202O95125 648 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 ZBTB48P10074 688 aaPredicted RBP19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 CYP2C8P10632 490 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 CMA1P23946 247 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 IRX3P78415 501 aaPredicted RBP19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 FASTKD5Q7L8L6 764 aaKnown RBP19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 CEP57L1Q8IYX8 460 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 PTPN18Q99952 460 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 ASCC2Q9H1I8 757 aaPredicted RBP19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 RANBP17Q9H2T7 1088 aaKnown RBP19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 SPDYE16A6NNV3 312 aaPredicted RBP19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 BTBD19C9JJ37 291 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 VWA5AO00534 786 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 PLA2G6O60733 806 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 CETPP11597 493 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 DSG3P32926 999 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 NR5A1Q13285 461 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 POTEEQ6S8J3 1075 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 FBXO11Q86XK2 927 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 AOPEPQ8N6M6 819 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 HOMER2Q9NSB8 354 aa19.27■□□□□ 0.68
CDKN1A-201ENST00000244741 BTBD18B2RXH4 712 aa19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 PFKFB1P16118 471 aa19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 XBP1P17861 261 aa19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 RASGRP4Q8TDF6 673 aa19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 CACTINQ8WUQ7 758 aaKnown RBP19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 MRFAP1L1Q96HT8 127 aa19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 PHF20Q9BVI0 1012 aa19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 FAM13BQ9NYF5 915 aa19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 CTDP1Q9Y5B0 961 aaPredicted RBP19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 RLFQ13129 1914 aa19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 ZNF536O15090 1300 aa19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 MMP1P03956 469 aa19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 PLS1Q14651 629 aa19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 NOM1Q5C9Z4 860 aaKnown RBP19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 DIS3L2Q8IYB7 885 aaKnown RBP19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 AMNQ9BXJ7 453 aa19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 SLC38A10Q9HBR0 1119 aa19.26■□□□□ 0.67
CDKN1A-201ENST00000244741 LOC285556D6RIA3 1793 aa19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 SMCO2A6NFE2 343 aa19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 FAM155AB1AL88 458 aaPredicted RBP19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 PDHXO00330 501 aa19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 SLC10A3P09131 477 aa19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 U2AF2P26368 475 aaKnown RBP eCLIP19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 GNL2Q13823 731 aaKnown RBP19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 PTPAQ15257 358 aa19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 NPY5RQ15761 445 aa19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 PAGR1Q9BTK6 254 aa19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 NAT10Q9H0A0 1025 aaKnown RBP19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 CCPG1Q9ULG6 757 aa19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 ZBED4O75132 1171 aa19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 HOXA7P31268 230 aaPredicted RBP19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 APLP1P51693 650 aa19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 DPCR1Q3MIW9 517 aa19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 HOXC10Q9NYD6 342 aa19.25■□□□□ 0.67
CDKN1A-201ENST00000244741 PARP14Q460N5 1801 aa19.24■□□□□ 0.67
CDKN1A-201ENST00000244741 TMEM132BQ14DG7 1078 aa19.24■□□□□ 0.67
CDKN1A-201ENST00000244741 FAM205CA6NFA0 338 aa19.23■□□□□ 0.67
CDKN1A-201ENST00000244741 ALAS1P13196 640 aa19.23■□□□□ 0.67
CDKN1A-201ENST00000244741 HERVK_113P62684 666 aa19.23■□□□□ 0.67
CDKN1A-201ENST00000244741 UBE2SQ16763 222 aa19.23■□□□□ 0.67
CDKN1A-201ENST00000244741 RIPK3Q9Y572 518 aa19.23■□□□□ 0.67
CDKN1A-201ENST00000244741 COL11A1P12107 1806 aaPredicted RBP19.23■□□□□ 0.67
CDKN1A-201ENST00000244741 BIN1O00499 593 aa19.23■□□□□ 0.67
CDKN1A-201ENST00000244741 PPP6R2O75170 966 aa19.23■□□□□ 0.67
CDKN1A-201ENST00000244741 ARID5BQ14865 1188 aa19.23■□□□□ 0.67
CDKN1A-201ENST00000244741 EARS2Q5JPH6 523 aaKnown RBP19.23■□□□□ 0.67
CDKN1A-201ENST00000244741 SHC4Q6S5L8 630 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms