RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 NIM1KQ8IY84 436 aa10.23□□□□□ -0.77
COL21A1-201ENST00000244728 ANKS4BQ8N8V4 417 aa10.23□□□□□ -0.77
COL21A1-201ENST00000244728 OXER1Q8TDS5 423 aa10.23□□□□□ -0.77
COL21A1-201ENST00000244728 PICK1Q9NRD5 415 aa10.23□□□□□ -0.77
COL21A1-201ENST00000244728 THRAP3Q9Y2W1 955 aaKnown RBP10.23□□□□□ -0.77
COL21A1-201ENST00000244728 NEBLO76041 1014 aa10.23□□□□□ -0.77
COL21A1-201ENST00000244728 GCNT3O95395 438 aa10.23□□□□□ -0.77
COL21A1-201ENST00000244728 RPL13P26373 211 aaKnown RBP10.23□□□□□ -0.77
COL21A1-201ENST00000244728 PLCB3Q01970 1234 aa10.23□□□□□ -0.77
COL21A1-201ENST00000244728 CACNB1Q02641 598 aaPredicted RBP10.23□□□□□ -0.77
COL21A1-201ENST00000244728 NAA25Q14CX7 972 aa10.23□□□□□ -0.77
COL21A1-201ENST00000244728 SLC9C1Q4G0N8 1177 aa10.23□□□□□ -0.77
COL21A1-201ENST00000244728 NEK8Q86SG6 692 aa10.23□□□□□ -0.77
COL21A1-201ENST00000244728 RNF26Q9BY78 433 aaPredicted RBP10.23□□□□□ -0.77
COL21A1-201ENST00000244728 TRIM31Q9BZY9 425 aa10.23□□□□□ -0.77
COL21A1-201ENST00000244728 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL21A1-201ENST00000244728 CEP104O60308 925 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 GUCY2DQ02846 1103 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 TRIM65Q6PJ69 517 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 GDAQ9Y2T3 454 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 ADAMTS13Q76LX8 1427 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 NEDD4P46934 1319 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 GOLGA6L10A0A0M3HER8 536 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 SASH3O75995 380 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 HAUS3Q68CZ6 603 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 KRT27Q7Z3Y8 459 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 CCDC84Q86UT8 332 aaPredicted RBP10.22□□□□□ -0.77
COL21A1-201ENST00000244728 ARHGEF1Q92888 912 aaKnown RBP10.22□□□□□ -0.77
COL21A1-201ENST00000244728 PIGSQ96S52 555 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 SERPINB13Q9UIV8 391 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 RWDD2AQ9UIY3 292 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 LEMD3Q9Y2U8 911 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 H3BQF6 201 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 PPP1R2P41236 205 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 TCP11X2Q5H9J9 407 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 USP49Q70CQ1 688 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 TTC16Q8NEE8 873 aa10.22□□□□□ -0.77
COL21A1-201ENST00000244728 RIN2Q8WYP3 895 aaPredicted RBP10.22□□□□□ -0.77
COL21A1-201ENST00000244728 BSDC1Q9NW68 430 aaPredicted RBP10.22□□□□□ -0.77
COL21A1-201ENST00000244728 OR52Z1P0C646 297 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 CCDC172P0C7W6 258 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 DESP17661 470 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 FXR1P51114 621 aaKnown RBP eCLIP10.21□□□□□ -0.77
COL21A1-201ENST00000244728 ANTXR2P58335 489 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 SNAP25P60880 206 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 RABL6Q3YEC7 729 aaPredicted RBP10.21□□□□□ -0.77
COL21A1-201ENST00000244728 ZNF658Q5TYW1 1059 aaPredicted RBP10.21□□□□□ -0.77
COL21A1-201ENST00000244728 CCDC155Q8N6L0 562 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 NOA1Q8NC60 698 aaKnown RBP10.21□□□□□ -0.77
COL21A1-201ENST00000244728 LZTS2Q9BRK4 669 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 SH2D4AQ9H788 454 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 FRMD4BQ9Y2L6 1034 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 FAM169AQ9Y6X4 670 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 A0A1B0GTH6 734 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 PPEF1O14829 653 aaPredicted RBP10.21□□□□□ -0.77
COL21A1-201ENST00000244728 EXOC3O60645 756 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 GUCY1A2P33402 732 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 MMS22LQ6ZRQ5 1243 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 MIGA2Q7L4E1 593 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 VTI1AQ96AJ9 217 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 LRRC45Q96CN5 670 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 CNOT6LQ96LI5 555 aaKnown RBP10.21□□□□□ -0.77
COL21A1-201ENST00000244728 CSRNP1Q96S65 589 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 PNKPQ96T60 521 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 FAM184BQ9ULE4 1060 aa10.21□□□□□ -0.77
COL21A1-201ENST00000244728 RPS6KA4O75676 772 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 EPHB4P54760 987 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 IFT88Q13099 833 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 PDCLQ13371 301 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 LRRC41Q15345 812 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 CCDC93Q567U6 631 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 HOOK3Q86VS8 718 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 TAOK3Q9H2K8 898 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 LY9Q9HBG7 655 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 POLD4Q9HCU8 107 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.21□□□□□ -0.78
COL21A1-201ENST00000244728 TESPA1A2RU30 521 aaPredicted RBP10.21□□□□□ -0.78
COL21A1-201ENST00000244728 EPB41P11171 864 aaKnown RBP10.21□□□□□ -0.78
COL21A1-201ENST00000244728 EEF1GP26641 437 aaKnown RBP10.21□□□□□ -0.78
COL21A1-201ENST00000244728 RFX5P48382 616 aaPredicted RBP10.21□□□□□ -0.78
COL21A1-201ENST00000244728 USP14P54578 494 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 NR1I3Q14994 352 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 ARHGAP44Q17R89 818 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 RUFY4Q6ZNE9 571 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 ILDR1Q86SU0 546 aaPredicted RBP10.21□□□□□ -0.78
COL21A1-201ENST00000244728 GPBP1Q86WP2 473 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.21□□□□□ -0.78
COL21A1-201ENST00000244728 NHEJ1Q9H9Q4 299 aaPredicted RBP10.21□□□□□ -0.78
COL21A1-201ENST00000244728 PSD3Q9NYI0 1048 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 HPS5Q9UPZ3 1129 aa10.21□□□□□ -0.78
COL21A1-201ENST00000244728 TRIM49BA6NDI0 452 aa10.2□□□□□ -0.78
COL21A1-201ENST00000244728 SEMA3EO15041 775 aa10.2□□□□□ -0.78
COL21A1-201ENST00000244728 GAS7O60861 476 aa10.2□□□□□ -0.78
COL21A1-201ENST00000244728 BBOX1O75936 387 aa10.2□□□□□ -0.78
COL21A1-201ENST00000244728 ZRANB2O95218 330 aaKnown RBP eCLIP10.2□□□□□ -0.78
COL21A1-201ENST00000244728 GRIN1Q05586 938 aa10.2□□□□□ -0.78
COL21A1-201ENST00000244728 CUL4BQ13620 913 aa10.2□□□□□ -0.78
COL21A1-201ENST00000244728 PDIA6Q15084 440 aa10.2□□□□□ -0.78
COL21A1-201ENST00000244728 KRT71Q3SY84 523 aa10.2□□□□□ -0.78
COL21A1-201ENST00000244728 CCDC25Q86WR0 208 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms