RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 CCT8L2Q96SF2 557 aa10.24□□□□□ -0.77
SRSF6-201ENST00000244020 SH3GL2Q99962 352 aa10.24□□□□□ -0.77
SRSF6-201ENST00000244020 IRAK4Q9NWZ3 460 aa10.24□□□□□ -0.77
SRSF6-201ENST00000244020 AFDNP55196 1824 aaKnown RBP10.24□□□□□ -0.77
SRSF6-201ENST00000244020 GRIN2DO15399 1336 aa10.24□□□□□ -0.77
SRSF6-201ENST00000244020 SMIM23A6NLE4 172 aa10.24□□□□□ -0.77
SRSF6-201ENST00000244020 IRS4O14654 1257 aaPredicted RBP10.24□□□□□ -0.77
SRSF6-201ENST00000244020 PRPF3O43395 683 aaKnown RBP10.24□□□□□ -0.77
SRSF6-201ENST00000244020 PPP1R37O75864 691 aa10.24□□□□□ -0.77
SRSF6-201ENST00000244020 EIF4A3P38919 411 aaKnown RBP10.24□□□□□ -0.77
SRSF6-201ENST00000244020 KIF11P52732 1056 aa10.24□□□□□ -0.77
SRSF6-201ENST00000244020 RASSF7Q02833 373 aa10.24□□□□□ -0.77
SRSF6-201ENST00000244020 PUM3Q15397 648 aaKnown RBP10.24□□□□□ -0.77
SRSF6-201ENST00000244020 PDXDC2PQ6P474 469 aa10.24□□□□□ -0.77
SRSF6-201ENST00000244020 GSTTP1A0A1W2PQM5 241 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 SNAP23O00161 211 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 SRGNP10124 158 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 GSCP56915 257 aaPredicted RBP10.23□□□□□ -0.77
SRSF6-201ENST00000244020 SEPT6Q14141 434 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 TOM1L2Q6ZVM7 507 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 NLRP14Q86W24 1093 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 LPIN2Q92539 896 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 MS4A14Q96JA4 679 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 ZSCAN10Q96SZ4 725 aaPredicted RBP10.23□□□□□ -0.77
SRSF6-201ENST00000244020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.23□□□□□ -0.774e-25■■□□□ 12.6
SRSF6-201ENST00000244020 CARSP49589 748 aaKnown RBP10.23□□□□□ -0.77
SRSF6-201ENST00000244020 PDE1CQ14123 709 aaPredicted RBP10.23□□□□□ -0.77
SRSF6-201ENST00000244020 SEPT14Q6ZU15 432 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 KLHL7Q8IXQ5 586 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 KRT12Q99456 494 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 RBM12Q9NTZ6 932 aaKnown RBP10.23□□□□□ -0.77
SRSF6-201ENST00000244020 TCP11L1Q9NUJ3 509 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 PDS5AQ29RF7 1337 aaKnown RBP10.23□□□□□ -0.77
SRSF6-201ENST00000244020 TLDC2A0PJX2 215 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 CALM1P0DP23 149 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 CALM2P0DP24 149 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 CALM3P0DP25 149 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 LONP1P36776 959 aaKnown RBP10.23□□□□□ -0.77
SRSF6-201ENST00000244020 IRF2BP1Q8IU81 584 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 ZHX3Q9H4I2 956 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 DONSONQ9NYP3 566 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 MST1RQ04912 1400 aa10.23□□□□□ -0.77
SRSF6-201ENST00000244020 GCOM1H8Y6P7 765 aaPredicted RBP10.22□□□□□ -0.77
SRSF6-201ENST00000244020 NFAT5O94916 1531 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 MYZAPP0CAP1 466 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 SKOR1P84550 965 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 SOS2Q07890 1332 aaPredicted RBP10.22□□□□□ -0.77
SRSF6-201ENST00000244020 SNCBQ16143 134 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 DISC1Q9NRI5 854 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.22□□□□□ -0.77
SRSF6-201ENST00000244020 PP2D1A8MPX8 630 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 ECM2O94769 699 aaPredicted RBP10.22□□□□□ -0.77
SRSF6-201ENST00000244020 RFC1P35251 1148 aaPredicted RBP10.22□□□□□ -0.77
SRSF6-201ENST00000244020 HDLBPQ00341 1268 aaKnown RBP10.22□□□□□ -0.77
SRSF6-201ENST00000244020 ARID5AQ03989 594 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 TRIM68Q6AZZ1 485 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 RNF168Q8IYW5 571 aaPredicted RBP10.22□□□□□ -0.77
SRSF6-201ENST00000244020 MTRQ99707 1265 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 ISCA1Q9BUE6 129 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 SH2D4AQ9H788 454 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 KIF1CO43896 1103 aaKnown RBP10.22□□□□□ -0.77
SRSF6-201ENST00000244020 RASGRF1Q13972 1273 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 PKN1Q16512 942 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 MEA1Q16626 185 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 HAUS3Q68CZ6 603 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 GIGYF2Q6Y7W6 1299 aaKnown RBP10.22□□□□□ -0.77
SRSF6-201ENST00000244020 P2RX5Q93086 422 aa10.22□□□□□ -0.77
SRSF6-201ENST00000244020 FSBPO95073 299 aa10.21□□□□□ -0.77
SRSF6-201ENST00000244020 EPB41P11171 864 aaKnown RBP10.21□□□□□ -0.77
SRSF6-201ENST00000244020 MDH1P40925 334 aaKnown RBP10.21□□□□□ -0.77
SRSF6-201ENST00000244020 CTSWP56202 376 aa10.21□□□□□ -0.77
SRSF6-201ENST00000244020 EP400NLQ6ZTU2 488 aa10.21□□□□□ -0.77
SRSF6-201ENST00000244020 CCDC13Q8IYE1 715 aa10.21□□□□□ -0.77
SRSF6-201ENST00000244020 ENAHQ8N8S7 591 aaPredicted RBP10.21□□□□□ -0.77
SRSF6-201ENST00000244020 ZNF507Q8TCN5 953 aa10.21□□□□□ -0.77
SRSF6-201ENST00000244020 DHTKD1Q96HY7 919 aaPredicted RBP10.21□□□□□ -0.77
SRSF6-201ENST00000244020 MAGEB6P1A0A0J9YX57 407 aa10.21□□□□□ -0.77
SRSF6-201ENST00000244020 TCRBV5S4A2TA0A5A2 114 aa10.21□□□□□ -0.77
SRSF6-201ENST00000244020 PTGISQ16647 500 aa10.21□□□□□ -0.77
SRSF6-201ENST00000244020 TMCO4Q5TGY1 634 aa10.21□□□□□ -0.77
SRSF6-201ENST00000244020 DZIP1Q86YF9 867 aaKnown RBP10.21□□□□□ -0.77
SRSF6-201ENST00000244020 RASGRP4Q8TDF6 673 aa10.21□□□□□ -0.77
SRSF6-201ENST00000244020 RUBCNQ92622 972 aa10.21□□□□□ -0.77
SRSF6-201ENST00000244020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.21□□□□□ -0.774e-9■■■■■ 33.1
SRSF6-201ENST00000244020 ZSCAN5CA6NGD5 496 aaPredicted RBP10.21□□□□□ -0.78
SRSF6-201ENST00000244020 SCG2P13521 617 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 CALML3P27482 149 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 ELF1P32519 619 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 PRPF4BQ13523 1007 aaKnown RBP10.21□□□□□ -0.78
SRSF6-201ENST00000244020 GLE1Q53GS7 698 aaKnown RBP10.21□□□□□ -0.78
SRSF6-201ENST00000244020 KDM7AQ6ZMT4 941 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 MYCBPAPQ8TBZ2 947 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 UBLCP1Q8WVY7 318 aaPredicted RBP10.21□□□□□ -0.78
SRSF6-201ENST00000244020 TBC1D31Q96DN5 1066 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 ATP6V1G3Q96LB4 118 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 PLAAQ9Y263 795 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 TACC3Q9Y6A5 838 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 GLI1P08151 1106 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 FAM153BP0C7A2 387 aa10.21□□□□□ -0.78
SRSF6-201ENST00000244020 TRAPPC10P48553 1259 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms