RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SFPQP23246 707 aaKnown RBP eCLIP20.82■□□□□ 0.92
HOXC11-201ENST00000243082 PTPN21Q16825 1174 aa20.82■□□□□ 0.92
HOXC11-201ENST00000243082 FAM83AQ86UY5 434 aa20.82■□□□□ 0.92
HOXC11-201ENST00000243082 PGAP2Q9UHJ9 254 aa20.82■□□□□ 0.92
HOXC11-201ENST00000243082 GDAQ9Y2T3 454 aa20.82■□□□□ 0.92
HOXC11-201ENST00000243082 MEIS2O14770 477 aa20.82■□□□□ 0.92
HOXC11-201ENST00000243082 TBC1D12O60347 775 aa20.82■□□□□ 0.92
HOXC11-201ENST00000243082 PDIA5Q14554 519 aa20.82■□□□□ 0.92
HOXC11-201ENST00000243082 NR1I3Q14994 352 aa20.82■□□□□ 0.92
HOXC11-201ENST00000243082 KMT5BQ4FZB7 885 aa20.82■□□□□ 0.92
HOXC11-201ENST00000243082 ACER1Q8TDN7 264 aa20.82■□□□□ 0.92
HOXC11-201ENST00000243082 AMNQ9BXJ7 453 aa20.82■□□□□ 0.92
HOXC11-201ENST00000243082 LRWD1Q9UFC0 647 aa20.82■□□□□ 0.92
HOXC11-201ENST00000243082 RWDD2AQ9UIY3 292 aa20.82■□□□□ 0.92
HOXC11-201ENST00000243082 MYH7BA7E2Y1 1941 aa20.81■□□□□ 0.92
HOXC11-201ENST00000243082 TMEM266Q2M3C6 531 aa20.81■□□□□ 0.92
HOXC11-201ENST00000243082 KIAA1755Q5JYT7 1200 aa20.81■□□□□ 0.92
HOXC11-201ENST00000243082 CIAPIN1Q6FI81 312 aa20.81■□□□□ 0.92
HOXC11-201ENST00000243082 SPICE1Q8N0Z3 855 aa20.81■□□□□ 0.92
HOXC11-201ENST00000243082 HAS1Q92839 578 aa20.81■□□□□ 0.92
HOXC11-201ENST00000243082 TAOK3Q9H2K8 898 aa20.81■□□□□ 0.92
HOXC11-201ENST00000243082 DDX25Q9UHL0 483 aaKnown RBP20.81■□□□□ 0.92
HOXC11-201ENST00000243082 ZBTB21Q9ULJ3 1066 aa20.81■□□□□ 0.92
HOXC11-201ENST00000243082 TMX2Q9Y320 296 aa20.81■□□□□ 0.92
HOXC11-201ENST00000243082 A0A1B0GTH6 734 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 WNT10BO00744 389 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 COBLO75128 1261 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 RHOBTB3O94955 611 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 GCFC2P16383 781 aaKnown RBP20.8■□□□□ 0.92
HOXC11-201ENST00000243082 PRCPP42785 496 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 IKQ13123 557 aaPredicted RBP20.8■□□□□ 0.92
HOXC11-201ENST00000243082 GRB10Q13322 594 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 NBPF9Q3BBW0 867 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 FBXO11Q86XK2 927 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 CALML4Q96GE6 196 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 ARHGEF10LQ9HCE6 1279 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 POLD1P28340 1107 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 PAK1Q13153 545 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 TBX2Q13207 712 aaPredicted RBP20.8■□□□□ 0.92
HOXC11-201ENST00000243082 SEMA3FQ13275 785 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 PNMA5Q96PV4 448 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 C7orf25Q9BPX7 421 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 TRIM9Q9C026 710 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 MTFR1LQ9H019 292 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 FER1L6Q2WGJ9 1857 aa20.8■□□□□ 0.92
HOXC11-201ENST00000243082 SHTN1A0MZ66 631 aa20.79■□□□□ 0.92
HOXC11-201ENST00000243082 POTEMA6NI47 508 aa20.79■□□□□ 0.92
HOXC11-201ENST00000243082 MIGA2Q7L4E1 593 aa20.79■□□□□ 0.92
HOXC11-201ENST00000243082 ADSSL1Q8N142 457 aa20.79■□□□□ 0.92
HOXC11-201ENST00000243082 NELFBQ8WX92 580 aa20.79■□□□□ 0.92
HOXC11-201ENST00000243082 P2RX7Q99572 595 aaKnown RBP20.79■□□□□ 0.92
HOXC11-201ENST00000243082 ANO3Q9BYT9 981 aa20.79■□□□□ 0.92
HOXC11-201ENST00000243082 KCND1Q9NSA2 647 aa20.79■□□□□ 0.92
HOXC11-201ENST00000243082 USP27XA6NNY8 438 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 NFKBIEO00221 500 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 MMP14P50281 582 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 USP11P51784 963 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 JDP2Q8WYK2 163 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 NAP1L4Q99733 375 aaKnown RBP20.78■□□□□ 0.92
HOXC11-201ENST00000243082 RAB34Q9BZG1 259 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 MYOZ2Q9NPC6 264 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 BLOC1S4Q9NUP1 217 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 PRR12Q9ULL5 1215 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 MAPK8IP1Q9UQF2 711 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 BRCA1P38398 1863 aaKnown RBP20.78■□□□□ 0.92
HOXC11-201ENST00000243082 MAP3K10Q02779 954 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 AP3B2Q13367 1082 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 USH1GQ495M9 461 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 CCDC125Q86Z20 511 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 GIMAP8Q8ND71 665 aaPredicted RBP20.78■□□□□ 0.92
HOXC11-201ENST00000243082 CRYGNQ8WXF5 182 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 NUDT12Q9BQG2 462 aa20.78■□□□□ 0.92
HOXC11-201ENST00000243082 SPECC1LQ69YQ0 1117 aa20.77■□□□□ 0.92
HOXC11-201ENST00000243082 GJA10Q969M2 543 aa20.77■□□□□ 0.92
HOXC11-201ENST00000243082 TMX1Q9H3N1 280 aa20.77■□□□□ 0.92
HOXC11-201ENST00000243082 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.77■□□□□ 0.92
HOXC11-201ENST00000243082 ADD3Q9UEY8 706 aaKnown RBP20.77■□□□□ 0.92
HOXC11-201ENST00000243082 CYP3A7-CYP3A51PA0A087WV96 503 aa20.77■□□□□ 0.91
HOXC11-201ENST00000243082 OPLAHO14841 1288 aa20.77■□□□□ 0.91
HOXC11-201ENST00000243082 TPM2P07951 284 aa20.77■□□□□ 0.91
HOXC11-201ENST00000243082 CYP3A7P24462 503 aa20.77■□□□□ 0.91
HOXC11-201ENST00000243082 CAP2P40123 477 aa20.77■□□□□ 0.91
HOXC11-201ENST00000243082 TPD52L1Q16890 204 aaPredicted RBP20.77■□□□□ 0.91
HOXC11-201ENST00000243082 C16orf45Q96MC5 204 aaPredicted RBP20.77■□□□□ 0.91
HOXC11-201ENST00000243082 MBOAT7Q96N66 472 aa20.77■□□□□ 0.91
HOXC11-201ENST00000243082 GOPCQ9HD26 462 aa20.77■□□□□ 0.91
HOXC11-201ENST00000243082 STK17AQ9UEE5 414 aa20.77■□□□□ 0.91
HOXC11-201ENST00000243082 TEX33O43247 280 aa20.76■□□□□ 0.91
HOXC11-201ENST00000243082 TAL1P17542 331 aaPredicted RBP20.76■□□□□ 0.91
HOXC11-201ENST00000243082 STAT2P52630 851 aa20.76■□□□□ 0.91
HOXC11-201ENST00000243082 AMPD3Q01432 767 aa20.76■□□□□ 0.91
HOXC11-201ENST00000243082 GOLGA8FQ08AF8 430 aa20.76■□□□□ 0.91
HOXC11-201ENST00000243082 GOLGA8DPQ0D2H9 430 aa20.76■□□□□ 0.91
HOXC11-201ENST00000243082 CCAR2Q8N163 923 aaKnown RBP20.76■□□□□ 0.91
HOXC11-201ENST00000243082 PRIMPOLQ96LW4 560 aa20.76■□□□□ 0.91
HOXC11-201ENST00000243082 CTAGE1Q96RT6 745 aa20.76■□□□□ 0.91
HOXC11-201ENST00000243082 LRRC10BA6NIK2 292 aa20.75■□□□□ 0.91
HOXC11-201ENST00000243082 KCNJ6P48051 423 aa20.75■□□□□ 0.91
HOXC11-201ENST00000243082 TNIP1Q15025 636 aa20.75■□□□□ 0.91
HOXC11-201ENST00000243082 FAM83BQ5T0W9 1011 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms