RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 FLT1P17948 1338 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 AGPSO00116 658 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 TECP42680 631 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 KRT83P78385 493 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 CABP7Q86V35 215 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 AFAP1L1Q8TED9 768 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 P2RX5Q93086 422 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 CCNT1O60563 726 aaKnown RBP17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 MOCS3O95396 460 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 CYLC1P35663 651 aaPredicted RBP17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 DIXDC1Q155Q3 683 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 GRIK5Q16478 980 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 TTC19Q6DKK2 380 aaPredicted RBP17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 FBXO33Q7Z6M2 555 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 AMIGO3Q86WK7 504 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 TRIM9Q9C026 710 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 VAT1LQ9HCJ6 419 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 MED4Q9NPJ6 270 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 NARFQ9UHQ1 456 aa17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 SAP30BPQ9UHR5 308 aaKnown RBP17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 DMGDHQ9UI17 866 aaKnown RBP17.15■□□□□ 0.34
PCDHB8-201ENST00000239444 NCK2O43639 380 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 KCNB1Q14721 858 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 VPS72Q15906 364 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 C2CD5Q86YS7 1000 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 CCDC155Q8N6L0 562 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 POLD4Q9HCU8 107 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 ZNHIT6Q9NWK9 470 aaKnown RBP17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 SRCAPQ6ZRS2 3230 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 COL24A1Q17RW2 1714 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 STXBP3O00186 592 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 IPO7O95373 1038 aaKnown RBP17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 DNA2P51530 1060 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 TUBB4BP68371 445 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 NFRKBQ6P4R8 1299 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 KIAA0895Q8NCT3 520 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 LRRC1Q9BTT6 524 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 MYH1P12882 1939 aa17.14■□□□□ 0.33
PCDHB8-201ENST00000239444 HIBADHP31937 336 aaKnown RBP17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 KCTD19Q17RG1 926 aaPredicted RBP17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 RC3H1Q5TC82 1133 aaKnown RBP17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 DYMQ7RTS9 669 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 MSL3Q8N5Y2 521 aaKnown RBP17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 SECISBP2LQ93073 1101 aaKnown RBP17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 NYXQ9GZU5 481 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 ACBD3Q9H3P7 528 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 MKNK2Q9HBH9 465 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 ARHGAP20Q9P2F6 1191 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 ARPP21Q9UBL0 812 aaPredicted RBP17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 ZPR1O75312 459 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 RPS6KA4O75676 772 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 PCP11498 1178 aaKnown RBP17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 CCNE1P24864 410 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 RPS8P62241 208 aaKnown RBP17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 ZBED6P86452 979 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 DNAJC21Q5F1R6 531 aaKnown RBP17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 CCNI2Q6ZMN8 369 aaPredicted RBP17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 GLIS3Q8NEA6 775 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 SH3RF3Q8TEJ3 882 aaPredicted RBP17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 CCDC42Q96M95 316 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 C8orf37Q96NL8 207 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 GPR101Q96P66 508 aaPredicted RBP17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 UIMC1Q96RL1 719 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 SEMA6BQ9H3T3 888 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 ATP8A2Q9NTI2 1148 aa17.13■□□□□ 0.33
PCDHB8-201ENST00000239444 EIF3CLB5ME19 914 aaKnown RBP17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 IVLP07476 585 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 IRX3P78415 501 aaPredicted RBP17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 KIF5AQ12840 1032 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 SND1Q7KZF4 910 aaKnown RBP eCLIP17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 TMC4Q7Z404 712 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 DZIP1Q86YF9 867 aaKnown RBP17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 GOLGA6L1Q8N7Z2 621 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 NLRP3Q96P20 1036 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 SETDB2Q96T68 719 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 EIF3CQ99613 913 aaKnown RBP17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 CRACR2AQ9BSW2 395 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 CCSER1Q9C0I3 900 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 SALL4Q9UJQ4 1053 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 AARSP49588 968 aaKnown RBP eCLIP17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 CREG2Q8IUH2 290 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 MMRN2Q9H8L6 949 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 BTAF1O14981 1849 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 TSPY3P0CV98 308 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 TSPY8P0CW00 308 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 GRM4Q14833 912 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 NGLY1Q96IV0 654 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 IFIH1Q9BYX4 1025 aaKnown RBP17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 TMEM260Q9NX78 707 aa17.12■□□□□ 0.33
PCDHB8-201ENST00000239444 KIAA1551Q9HCM1 1747 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 TOM1O60784 492 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 VAV2P52735 878 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 NAPAP54920 295 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 CKAP4Q07065 602 aaKnown RBP17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 MAP9Q49MG5 647 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 USP17L2Q6R6M4 530 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 NBPF5PQ86XG9 351 aaPredicted RBP17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 DHTKD1Q96HY7 919 aaPredicted RBP17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 TMEM47Q9BQJ4 181 aa17.11■□□□□ 0.33
PCDHB8-201ENST00000239444 MMTAG2Q9BU76 263 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms