RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 MBD4O95243 580 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 SUPT20HL2P0C7V6 817 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 RLBP1P12271 317 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 RFC2P35250 354 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 ADD2P35612 726 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 ZXDAP98168 799 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 COL9A2Q14055 689 aaPredicted RBP9.98□□□□□ -0.81
IFT43-201ENST00000238628 PTPROQ16827 1216 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 SLFNL1Q499Z3 407 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 SNRNP48Q6IEG0 339 aaKnown RBP9.98□□□□□ -0.81
IFT43-201ENST00000238628 MAMDC4Q6UXC1 1216 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 C16orf86Q6ZW13 317 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 TMCO2Q7Z6W1 182 aaPredicted RBP9.98□□□□□ -0.81
IFT43-201ENST00000238628 RETREG2Q8NC44 543 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 REPS2Q8NFH8 660 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 NKD2Q969F2 451 aaPredicted RBP9.98□□□□□ -0.81
IFT43-201ENST00000238628 MRPL38Q96DV4 380 aaKnown RBP9.98□□□□□ -0.81
IFT43-201ENST00000238628 BOLA2Q9H3K6 86 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.98□□□□□ -0.81
IFT43-201ENST00000238628 CLDND1Q9NY35 253 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 GRIN2DO15399 1336 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 KMT2EQ8IZD2 1858 aa9.98□□□□□ -0.81
IFT43-201ENST00000238628 DCHS1Q96JQ0 3298 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 SCN5AQ14524 2016 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 KMT2BQ9UMN6 2715 aaPredicted RBP9.97□□□□□ -0.81
IFT43-201ENST00000238628 STXBP3O00186 592 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 ZEB2O60315 1214 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 BAIAP3O94812 1187 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 NBL1P41271 181 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 PSMC6P62333 389 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 SMAD2Q15796 467 aaKnown RBP9.97□□□□□ -0.81
IFT43-201ENST00000238628 CLUL1Q15846 466 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 TIGD5Q53EQ6 642 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 TCEAL5Q5H9L2 206 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 CTR9Q6PD62 1173 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 CPXCR1Q8N123 301 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 PRPF38AQ8NAV1 312 aaKnown RBP9.97□□□□□ -0.81
IFT43-201ENST00000238628 BANK1Q8NDB2 785 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 FBXO22Q8NEZ5 403 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 RMDN1Q96DB5 314 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 KIF1BPQ96EK5 621 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 SLF1Q9BQI6 1058 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 TEX13BQ9BXU2 312 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.97□□□□□ -0.81
IFT43-201ENST00000238628 ALDH8A1Q9H2A2 487 aaPredicted RBP9.97□□□□□ -0.81
IFT43-201ENST00000238628 ABHD16BQ9H3Z7 469 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 PAG1Q9NWQ8 432 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 RIPK3Q9Y572 518 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 CTDP1Q9Y5B0 961 aaPredicted RBP9.97□□□□□ -0.81
IFT43-201ENST00000238628 SLC4A4Q9Y6R1 1079 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 NCOR2Q9Y618 2525 aa9.97□□□□□ -0.81
IFT43-201ENST00000238628 GVINP1Q7Z2Y8 2422 aa9.96□□□□□ -0.81
IFT43-201ENST00000238628 MYH7P12883 1935 aa9.96□□□□□ -0.81
IFT43-201ENST00000238628 DNAJC25-GNG10A0A024R161 153 aa9.96□□□□□ -0.82
IFT43-201ENST00000238628 LINC01553A4QN01 128 aa9.96□□□□□ -0.82
IFT43-201ENST00000238628 F5H6K3 240 aa9.96□□□□□ -0.82
IFT43-201ENST00000238628 ZBED4O75132 1171 aa9.96□□□□□ -0.82
IFT43-201ENST00000238628 NUBP1P53384 320 aa9.96□□□□□ -0.82
IFT43-201ENST00000238628 KLRC3Q07444 240 aa9.96□□□□□ -0.82
IFT43-201ENST00000238628 SIGLEC14Q08ET2 396 aa9.96□□□□□ -0.82
IFT43-201ENST00000238628 ZNF467Q7Z7K2 595 aaPredicted RBP9.96□□□□□ -0.82
IFT43-201ENST00000238628 ANKRD35Q8N283 1001 aa9.96□□□□□ -0.82
IFT43-201ENST00000238628 NUP88Q99567 741 aaPredicted RBP9.96□□□□□ -0.82
IFT43-201ENST00000238628 RAD9AQ99638 391 aa9.96□□□□□ -0.82
IFT43-201ENST00000238628 AP5M1Q9H0R1 490 aa9.96□□□□□ -0.82
IFT43-201ENST00000238628 TRMT13Q9NUP7 481 aaKnown RBP9.96□□□□□ -0.82
IFT43-201ENST00000238628 ATRXP46100 2492 aa9.96□□□□□ -0.82
IFT43-201ENST00000238628 MYH4Q9Y623 1939 aa9.95□□□□□ -0.82
IFT43-201ENST00000238628 MBTPS2O43462 519 aa9.95□□□□□ -0.82
IFT43-201ENST00000238628 GALR2O43603 387 aaPredicted RBP9.95□□□□□ -0.82
IFT43-201ENST00000238628 IQCF3P0C7M6 154 aa9.95□□□□□ -0.82
IFT43-201ENST00000238628 WDR5P61964 334 aaKnown RBP9.95□□□□□ -0.82
IFT43-201ENST00000238628 NKX3-2P78367 333 aa9.95□□□□□ -0.82
IFT43-201ENST00000238628 TNFAIP2Q03169 654 aa9.95□□□□□ -0.82
IFT43-201ENST00000238628 UBE3CQ15386 1083 aa9.95□□□□□ -0.82
IFT43-201ENST00000238628 FSCN1Q16658 493 aaKnown RBP9.95□□□□□ -0.82
IFT43-201ENST00000238628 RPAP2Q8IXW5 612 aaPredicted RBP9.95□□□□□ -0.82
IFT43-201ENST00000238628 STK11IPQ8N1F8 1099 aa9.95□□□□□ -0.82
IFT43-201ENST00000238628 C17orf80Q9BSJ5 609 aa9.95□□□□□ -0.82
IFT43-201ENST00000238628 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.95□□□□□ -0.82
IFT43-201ENST00000238628 MKNK2Q9HBH9 465 aa9.95□□□□□ -0.82
IFT43-201ENST00000238628 RAVER2Q9HCJ3 691 aaKnown RBP9.95□□□□□ -0.82
IFT43-201ENST00000238628 NYAP2Q9P242 653 aa9.95□□□□□ -0.82
IFT43-201ENST00000238628 TNKSO95271 1327 aa9.95□□□□□ -0.82
IFT43-201ENST00000238628 ACACBO00763 2458 aa9.95□□□□□ -0.82
IFT43-201ENST00000238628 ATP2A1O14983 1001 aa9.94□□□□□ -0.82
IFT43-201ENST00000238628 DYNC1LI2O43237 492 aaPredicted RBP9.94□□□□□ -0.82
IFT43-201ENST00000238628 NCK2O43639 380 aa9.94□□□□□ -0.82
IFT43-201ENST00000238628 RAB11FIP3O75154 756 aa9.94□□□□□ -0.82
IFT43-201ENST00000238628 GJB5O95377 273 aa9.94□□□□□ -0.82
IFT43-201ENST00000238628 CHGBP05060 677 aa9.94□□□□□ -0.82
IFT43-201ENST00000238628 ATP5JP18859 108 aa9.94□□□□□ -0.82
IFT43-201ENST00000238628 DEFB103AP81534 67 aa9.94□□□□□ -0.82
IFT43-201ENST00000238628 MKRN4PQ13434 485 aaPredicted RBP9.94□□□□□ -0.82
IFT43-201ENST00000238628 PUM1Q14671 1186 aaKnown RBP eCLIP9.94□□□□□ -0.82
IFT43-201ENST00000238628 ST3GAL2Q16842 350 aa9.94□□□□□ -0.82
IFT43-201ENST00000238628 MCTP2Q6DN12 878 aa9.94□□□□□ -0.82
IFT43-201ENST00000238628 ZSCAN25Q6NSZ9 544 aa9.94□□□□□ -0.82
IFT43-201ENST00000238628 FAM117BQ6P1L5 589 aa9.94□□□□□ -0.82
IFT43-201ENST00000238628 ARMCX2Q7L311 632 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms