RNA–Protein interactions for RNA: ENST00000236698.9

STAG1-201, Transcript of stromal antigen 1, humanhuman

TSL 1 (best) BASIC

Gene STAG1, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-201ENST00000236698 ZNF287Q9HBT7 754 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 TRPC6Q9Y210 931 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 SYF2O95926 243 aaKnown RBP7.56□□□□□ -1.2
STAG1-201ENST00000236698 BMP15O95972 392 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 CTNNA2P26232 953 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 CEP78Q5JTW2 689 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 ALKBH8Q96BT7 664 aaKnown RBP7.56□□□□□ -1.2
STAG1-201ENST00000236698 OSBPL10Q9BXB5 764 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 SORBS3O60504 671 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 ZSCAN20P17040 1043 aaPredicted RBP7.56□□□□□ -1.2
STAG1-201ENST00000236698 MAP3K11Q16584 847 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 STK32CQ86UX6 486 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 EPAS1Q99814 870 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 BRD9Q9H8M2 597 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 AVENQ9NQS1 362 aaPredicted RBP7.56□□□□□ -1.2
STAG1-201ENST00000236698 CNNM1Q9NRU3 951 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 F8W031 263 aaPredicted RBP7.56□□□□□ -1.2
STAG1-201ENST00000236698 ATP2A2P16615 1042 aaKnown RBP7.56□□□□□ -1.2
STAG1-201ENST00000236698 SMARCA1P28370 1054 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 ATP5DP30049 168 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 BRDTQ58F21 947 aaPredicted RBP7.56□□□□□ -1.2
STAG1-201ENST00000236698 DHTKD1Q96HY7 919 aaPredicted RBP7.56□□□□□ -1.2
STAG1-201ENST00000236698 USP26Q9BXU7 913 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 PHAXQ9H814 394 aaKnown RBP7.56□□□□□ -1.2
STAG1-201ENST00000236698 TAGLN3Q9UI15 199 aa7.56□□□□□ -1.2
STAG1-201ENST00000236698 METP08581 1390 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 ATP2A1O14983 1001 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 RNMTO43148 476 aaKnown RBP7.55□□□□□ -1.2
STAG1-201ENST00000236698 SNUPNO95149 360 aaKnown RBP7.55□□□□□ -1.2
STAG1-201ENST00000236698 LMAN1P49257 510 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 CDR2Q01850 454 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 GKAP1Q5VSY0 366 aaPredicted RBP7.55□□□□□ -1.2
STAG1-201ENST00000236698 FBXW10Q5XX13 1052 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 SWSAP1Q6NVH7 229 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 UTP15Q8TED0 518 aaKnown RBP7.55□□□□□ -1.2
STAG1-201ENST00000236698 VCPKMTQ9H867 229 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 ZWILCHQ9H900 591 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 A6NNZ2 444 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 SLC5A1P13866 664 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 YY1P25490 414 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 HADHAP40939 763 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 GEN1Q17RS7 908 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 TUBB8Q3ZCM7 444 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 LRSAM1Q6UWE0 723 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 ZBTB46Q86UZ6 589 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 DDX42Q86XP3 938 aaKnown RBP eCLIP7.55□□□□□ -1.2
STAG1-201ENST00000236698 RNPC3Q96LT9 517 aaKnown RBP7.55□□□□□ -1.2
STAG1-201ENST00000236698 TACO1Q9BSH4 297 aaKnown RBP7.55□□□□□ -1.2
STAG1-201ENST00000236698 DEPDC5O75140 1603 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 IBTKQ9P2D0 1353 aaPredicted RBP7.55□□□□□ -1.2
STAG1-201ENST00000236698 hCG_1642624A0A1W2PR95 340 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 TROVE2P10155 538 aaKnown RBP eCLIP7.55□□□□□ -1.2
STAG1-201ENST00000236698 CHMLP26374 656 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 ATP11AP98196 1134 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 APOBRQ0VD83 1088 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 ANGPT1Q15389 498 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 CWC27Q6UX04 472 aaKnown RBP7.55□□□□□ -1.2
STAG1-201ENST00000236698 MPRIPQ6WCQ1 1025 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 CEP57Q86XR8 500 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 TACC3Q9Y6A5 838 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 A0A1W2PRG0 241 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 TMEM110-MUSTN1A8MSY1 372 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 SGTAO43765 313 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 LGR5O75473 907 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 GAS8O95995 478 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 ADCY1Q08828 1119 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 MAP3K12Q12852 859 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 CNGA3Q16281 694 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 TMX3Q96JJ7 454 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 SLC26A6Q9BXS9 759 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 UPF3BQ9BZI7 483 aaKnown RBP7.55□□□□□ -1.2
STAG1-201ENST00000236698 NRDE2Q9H7Z3 1164 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 EPB41L4AQ9HCS5 686 aaPredicted RBP7.55□□□□□ -1.2
STAG1-201ENST00000236698 ATPIF1Q9UII2 106 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 MAP3K2Q9Y2U5 619 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 DIP2CQ9Y2E4 1556 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 STX6O43752 255 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 RANBP6O60518 1105 aaKnown RBP7.55□□□□□ -1.2
STAG1-201ENST00000236698 TSPAN9O75954 239 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 IGHMBP2P38935 993 aaKnown RBP7.55□□□□□ -1.2
STAG1-201ENST00000236698 NFKB2Q00653 900 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 ZNF574Q6ZN55 896 aaPredicted RBP7.55□□□□□ -1.2
STAG1-201ENST00000236698 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.55□□□□□ -1.2
STAG1-201ENST00000236698 CTAGE1Q96RT6 745 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 EDARQ9UNE0 448 aa7.55□□□□□ -1.2
STAG1-201ENST00000236698 ATF7P17544 494 aaPredicted RBP7.54□□□□□ -1.2
STAG1-201ENST00000236698 LTKP29376 864 aa7.54□□□□□ -1.2
STAG1-201ENST00000236698 NOS2P35228 1153 aa7.54□□□□□ -1.2
STAG1-201ENST00000236698 UBXN2AP68543 259 aa7.54□□□□□ -1.2
STAG1-201ENST00000236698 TCIRG1Q13488 830 aa7.54□□□□□ -1.2
STAG1-201ENST00000236698 ANAPC16Q96DE5 110 aa7.54□□□□□ -1.2
STAG1-201ENST00000236698 DNAJC25Q9H1X3 360 aa7.54□□□□□ -1.2
STAG1-201ENST00000236698 CASS4Q9NQ75 786 aa7.54□□□□□ -1.2
STAG1-201ENST00000236698 ABCA6Q8N139 1617 aa7.54□□□□□ -1.2
STAG1-201ENST00000236698 SWT1Q5T5J6 900 aaKnown RBP7.54□□□□□ -1.2
STAG1-201ENST00000236698 STXBP4Q6ZWJ1 553 aa7.54□□□□□ -1.2
STAG1-201ENST00000236698 MCM8Q9UJA3 840 aa7.54□□□□□ -1.2
STAG1-201ENST00000236698 PRMT3O60678 531 aa7.54□□□□□ -1.2
STAG1-201ENST00000236698 SERPINI2O75830 405 aa7.54□□□□□ -1.2
STAG1-201ENST00000236698 EPN2O95208 641 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms