RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 USP6NLQ92738 828 aa13.09□□□□□ -0.31
SF3B6-201ENST00000233468 AGBL1Q96MI9 1066 aa13.09□□□□□ -0.31
SF3B6-201ENST00000233468 GDF15Q99988 308 aa13.09□□□□□ -0.31
SF3B6-201ENST00000233468 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
SF3B6-201ENST00000233468 VAT1LQ9HCJ6 419 aa13.09□□□□□ -0.31
SF3B6-201ENST00000233468 RNF146Q9NTX7 359 aa13.09□□□□□ -0.31
SF3B6-201ENST00000233468 OGDHLQ9ULD0 1010 aa13.09□□□□□ -0.31
SF3B6-201ENST00000233468 DIS3Q9Y2L1 958 aaKnown RBP13.09□□□□□ -0.31
SF3B6-201ENST00000233468 PFASO15067 1338 aa13.09□□□□□ -0.31
SF3B6-201ENST00000233468 ZBTB5O15062 677 aa13.08□□□□□ -0.32
SF3B6-201ENST00000233468 CCND3P30281 292 aaPredicted RBP13.08□□□□□ -0.32
SF3B6-201ENST00000233468 CACNB2Q08289 660 aaPredicted RBP13.08□□□□□ -0.32
SF3B6-201ENST00000233468 CDC37Q16543 378 aaPredicted RBP13.08□□□□□ -0.32
SF3B6-201ENST00000233468 MCF2L2Q86YR7 1114 aa13.08□□□□□ -0.32
SF3B6-201ENST00000233468 FANCBQ8NB91 859 aa13.08□□□□□ -0.32
SF3B6-201ENST00000233468 AMNQ9BXJ7 453 aa13.08□□□□□ -0.32
SF3B6-201ENST00000233468 C11orf49Q9H6J7 331 aa13.08□□□□□ -0.32
SF3B6-201ENST00000233468 JMJD4Q9H9V9 463 aa13.08□□□□□ -0.32
SF3B6-201ENST00000233468 SENP2Q9HC62 589 aa13.08□□□□□ -0.32
SF3B6-201ENST00000233468 HOMER2Q9NSB8 354 aa13.08□□□□□ -0.32
SF3B6-201ENST00000233468 SEC63Q9UGP8 760 aaKnown RBP13.08□□□□□ -0.32
SF3B6-201ENST00000233468 NAP1L2Q9ULW6 460 aaPredicted RBP13.08□□□□□ -0.32
SF3B6-201ENST00000233468 MRPL11Q9Y3B7 192 aaKnown RBP13.08□□□□□ -0.32
SF3B6-201ENST00000233468 RIPK3Q9Y572 518 aa13.08□□□□□ -0.32
SF3B6-201ENST00000233468 ZNF536O15090 1300 aa13.08□□□□□ -0.32
SF3B6-201ENST00000233468 KLF18A0A0U1RQI7 1052 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 SNAP25P60880 206 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 ANKRD1Q15327 319 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 C8orf34Q49A92 452 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 OLFML2BQ68BL8 750 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 APOA5Q6Q788 366 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 MICU3Q86XE3 530 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 FBXO11Q86XK2 927 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 STAG2Q8N3U4 1231 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 MSL3Q8N5Y2 521 aaKnown RBP13.07□□□□□ -0.32
SF3B6-201ENST00000233468 ANKLE1Q8NAG6 615 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 BRF1Q92994 677 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 RRP36Q96EU6 259 aaKnown RBP13.07□□□□□ -0.32
SF3B6-201ENST00000233468 MPHOSPH6Q99547 160 aaKnown RBP13.07□□□□□ -0.32
SF3B6-201ENST00000233468 SPZ1Q9BXG8 430 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 RIOX1Q9H6W3 641 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 GPHNQ9NQX3 736 aaPredicted RBP13.07□□□□□ -0.32
SF3B6-201ENST00000233468 PDRG1Q9NUG6 133 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 ABCB11O95342 1321 aa13.07□□□□□ -0.32
SF3B6-201ENST00000233468 PNMA6FA0A0J9YX94 578 aa13.06□□□□□ -0.32
SF3B6-201ENST00000233468 GOLGA8AA7E2F4 631 aa13.06□□□□□ -0.32
SF3B6-201ENST00000233468 GOLGA8BA8MQT2 603 aa13.06□□□□□ -0.32
SF3B6-201ENST00000233468 MAGEA10P43363 369 aaPredicted RBP13.06□□□□□ -0.32
SF3B6-201ENST00000233468 METAP2P50579 478 aaKnown RBP eCLIP13.06□□□□□ -0.32
SF3B6-201ENST00000233468 RTN1Q16799 776 aa13.06□□□□□ -0.32
SF3B6-201ENST00000233468 RGS22Q8NE09 1264 aa13.06□□□□□ -0.32
SF3B6-201ENST00000233468 IL27Q8NEV9 243 aa13.06□□□□□ -0.32
SF3B6-201ENST00000233468 TCEANC2Q96MN5 208 aa13.06□□□□□ -0.32
SF3B6-201ENST00000233468 MYL10Q9BUA6 226 aa13.06□□□□□ -0.32
SF3B6-201ENST00000233468 AGXT2Q9BYV1 514 aa13.06□□□□□ -0.32
SF3B6-201ENST00000233468 FLRT1Q9NZU1 646 aa13.06□□□□□ -0.32
SF3B6-201ENST00000233468 RLFQ13129 1914 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 A0A1W2PPC1 479 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 B4DLN1 442 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 COBLO75128 1261 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 MRPL12P52815 198 aaKnown RBP13.05□□□□□ -0.32
SF3B6-201ENST00000233468 QRICH1Q2TAL8 776 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 ZNF792Q3KQV3 632 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 USH1GQ495M9 461 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 NSMFQ6X4W1 530 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 Q7L0L9 218 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 HOMER1Q86YM7 354 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 SAMD3Q8N6K7 520 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 MTMR8Q96EF0 704 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 IL17RAQ96F46 866 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 ALDH8A1Q9H2A2 487 aaPredicted RBP13.05□□□□□ -0.32
SF3B6-201ENST00000233468 CPVLQ9H3G5 476 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 MAP3K20Q9NYL2 800 aaKnown RBP13.05□□□□□ -0.32
SF3B6-201ENST00000233468 ADD3Q9UEY8 706 aaKnown RBP13.05□□□□□ -0.32
SF3B6-201ENST00000233468 NRBP1Q9UHY1 535 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 PCDHA1Q9Y5I3 950 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 UNC80Q8N2C7 3258 aa13.05□□□□□ -0.32
SF3B6-201ENST00000233468 ZNFX1Q9P2E3 1918 aaKnown RBP13.05□□□□□ -0.32
SF3B6-201ENST00000233468 LOC102724159A0A0B4J2E5 919 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 PTPDC1A2A3K4 754 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 ASB14A6NK59 587 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 PGK2P07205 417 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 COL6A1P12109 1028 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 CPA1P15085 419 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 BMP8BP34820 402 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 APOBRQ0VD83 1088 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 PWP2Q15269 919 aaKnown RBP13.04□□□□□ -0.32
SF3B6-201ENST00000233468 LRRC26Q2I0M4 334 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 CPLX2Q6PUV4 134 aaKnown RBP13.04□□□□□ -0.32
SF3B6-201ENST00000233468 RNF207Q6ZRF8 634 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 TMTC3Q6ZXV5 915 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 CCDC144CPQ8IYA2 1237 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 SLC17A8Q8NDX2 589 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 MAML3Q96JK9 1138 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 PIGSQ96S52 555 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 C22orf23Q9BZE7 217 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 UPF3BQ9BZI7 483 aaKnown RBP13.04□□□□□ -0.32
SF3B6-201ENST00000233468 A1CFQ9NQ94 594 aaKnown RBP13.04□□□□□ -0.32
SF3B6-201ENST00000233468 CNPY2Q9Y2B0 182 aa13.04□□□□□ -0.32
SF3B6-201ENST00000233468 EYSQ5T1H1 3165 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms