RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 LDLRAD1Q5T700 205 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 EMC10Q5UCC4 262 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 NPHP3Q7Z494 1330 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 PALB2Q86YC2 1186 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 HDAC7Q8WUI4 952 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 LEO1Q8WVC0 666 aaPredicted RBP9.25□□□□□ -0.93
SPARC-201ENST00000231061 NDFIP2Q9NV92 336 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 MED23Q9ULK4 1368 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 PYCARDQ9ULZ3 195 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 RPL17P18621 184 aaKnown RBP9.25□□□□□ -0.93
SPARC-201ENST00000231061 USP11P51784 963 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 CRY1Q16526 586 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 ZNF280CQ8ND82 737 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.25□□□□□ -0.93
SPARC-201ENST00000231061 SCG3Q8WXD2 468 aaKnown RBP9.25□□□□□ -0.93
SPARC-201ENST00000231061 TRIM5Q9C035 493 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 CROTQ9UKG9 612 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 CCNCP24863 283 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 MAPRE1Q15691 268 aaKnown RBP9.25□□□□□ -0.93
SPARC-201ENST00000231061 BPHLQ86WA6 291 aaPredicted RBP9.25□□□□□ -0.93
SPARC-201ENST00000231061 SH3GLB2Q9NR46 395 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 DDX19AQ9NUU7 478 aaKnown RBP9.25□□□□□ -0.93
SPARC-201ENST00000231061 HOOK1Q9UJC3 728 aaKnown RBP9.25□□□□□ -0.93
SPARC-201ENST00000231061 CARD8Q9Y2G2 431 aa9.25□□□□□ -0.93
SPARC-201ENST00000231061 LMO7Q8WWI1 1683 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 NPHP4O75161 1426 aaPredicted RBP9.24□□□□□ -0.93
SPARC-201ENST00000231061 HEG1Q9ULI3 1381 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 GOLGA6L10A6NI86 522 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 RTCAO00442 366 aaKnown RBP9.24□□□□□ -0.93
SPARC-201ENST00000231061 TNFRSF10BO14763 440 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 SNRPA1P09661 255 aaKnown RBP9.24□□□□□ -0.93
SPARC-201ENST00000231061 PARP1P09874 1014 aaKnown RBP9.24□□□□□ -0.93
SPARC-201ENST00000231061 PHKG2P15735 406 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 ATP5JP18859 108 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 PTGS1P23219 599 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 HNRNPH1P31943 449 aaKnown RBP9.24□□□□□ -0.93
SPARC-201ENST00000231061 ST5P78524 1137 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 MLLT1Q03111 559 aaPredicted RBP9.24□□□□□ -0.93
SPARC-201ENST00000231061 ACAP1Q15027 740 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 CHRNA2Q15822 529 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 SEPT7Q16181 437 aaKnown RBP9.24□□□□□ -0.93
SPARC-201ENST00000231061 C16orf54Q6UWD8 224 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 RTL10Q7L3V2 364 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 VPS50Q96JG6 964 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 MTMR12Q9C0I1 747 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 RIMKLBQ9ULI2 386 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 FOXN3O00409 490 aaPredicted RBP9.24□□□□□ -0.93
SPARC-201ENST00000231061 BPNT1O95861 308 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 NLRP12P59046 1061 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 PTPN12Q05209 780 aaKnown RBP9.24□□□□□ -0.93
SPARC-201ENST00000231061 NAA30Q147X3 362 aaPredicted RBP9.24□□□□□ -0.93
SPARC-201ENST00000231061 LMBR1LQ6UX01 489 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 C11orf74Q86VG3 221 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 SPATS2Q86XZ4 545 aaKnown RBP9.24□□□□□ -0.93
SPARC-201ENST00000231061 IFNL2Q8IZJ0 200 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 DDX17Q92841 729 aaKnown RBP9.24□□□□□ -0.93
SPARC-201ENST00000231061 SMARCE1Q969G3 411 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 PRKAG2Q9UGJ0 569 aa9.24□□□□□ -0.93
SPARC-201ENST00000231061 ZNF330Q9Y3S2 320 aaPredicted RBP9.24□□□□□ -0.93
SPARC-201ENST00000231061 GOLGA6L10A0A0M3HER8 536 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 ACSL4O60488 711 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 STAM2O75886 525 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 TNNI2P48788 182 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 CABP4P57796 275 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 CLPPQ16740 277 aaPredicted RBP9.23□□□□□ -0.93
SPARC-201ENST00000231061 MCMDC2Q4G0Z9 681 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 HSP90AA5PQ58FG0 334 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 PDXDC2PQ6P474 469 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 NCCRP1Q6ZVX7 275 aaPredicted RBP9.23□□□□□ -0.93
SPARC-201ENST00000231061 CBX8Q9HC52 389 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 COPRSQ9NQ92 184 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 MCM8Q9UJA3 840 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 ELP1O95163 1332 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 ATP8B1O43520 1251 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 LILRB3O75022 631 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 TMEM127O75204 238 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 NR1I2O75469 434 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 SLFNL1Q499Z3 407 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 PTF1AQ7RTS3 328 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 CABLES1Q8TDN4 633 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 GLMNQ92990 594 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 ALPK1Q96QP1 1244 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 KCNF1Q9H3M0 494 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 USP54Q70EL1 1684 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 OVOS2A0A0G2JMS6 1433 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 hCG_1642624A0A1W2PR95 340 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 CYP21A2P08686 494 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 SHQ1Q6PI26 577 aaKnown RBP9.23□□□□□ -0.93
SPARC-201ENST00000231061 FCHSD1Q86WN1 690 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 JAKMIP2Q96AA8 810 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 CLSTN2Q9H4D0 955 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 WDR37Q9Y2I8 494 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 MRPS23Q9Y3D9 190 aaKnown RBP9.23□□□□□ -0.93
SPARC-201ENST00000231061 CRYBG1Q9Y4K1 1723 aa9.23□□□□□ -0.93
SPARC-201ENST00000231061 NEK5Q6P3R8 708 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 POTEEQ6S8J3 1075 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 TRIML2Q8N7C3 387 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 CUL5Q93034 780 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 RBM41Q96IZ5 413 aaKnown RBP9.22□□□□□ -0.93
SPARC-201ENST00000231061 PCSK1NQ9UHG2 260 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms