RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 TMEM110-MUSTN1A8MSY1 372 aa4.81□□□□□ -1.64
CDH9-201ENST00000231021 KIF5CO60282 957 aa4.81□□□□□ -1.64
CDH9-201ENST00000231021 PMLP29590 882 aa4.81□□□□□ -1.64
CDH9-201ENST00000231021 CENPCQ03188 943 aa4.81□□□□□ -1.64
CDH9-201ENST00000231021 MRPL28Q13084 256 aaKnown RBP4.81□□□□□ -1.64
CDH9-201ENST00000231021 MMEL1Q495T6 779 aa4.81□□□□□ -1.64
CDH9-201ENST00000231021 WWC2Q6AWC2 1192 aa4.81□□□□□ -1.64
CDH9-201ENST00000231021 SLC44A2Q8IWA5 706 aaPredicted RBP4.81□□□□□ -1.64
CDH9-201ENST00000231021 DCLK2Q8N568 766 aa4.81□□□□□ -1.64
CDH9-201ENST00000231021 NUP133Q8WUM0 1156 aa4.81□□□□□ -1.64
CDH9-201ENST00000231021 RSAD2Q8WXG1 361 aa4.81□□□□□ -1.64
CDH9-201ENST00000231021 UBXN10Q96LJ8 280 aa4.81□□□□□ -1.64
CDH9-201ENST00000231021 CCDC113Q9H0I3 377 aa4.81□□□□□ -1.64
CDH9-201ENST00000231021 EPB41L4AQ9HCS5 686 aaPredicted RBP4.81□□□□□ -1.64
CDH9-201ENST00000231021 ACTR10Q9NZ32 417 aa4.81□□□□□ -1.64
CDH9-201ENST00000231021 ZHX1Q9UKY1 873 aaPredicted RBP4.81□□□□□ -1.64
CDH9-201ENST00000231021 PLAAQ9Y263 795 aa4.81□□□□□ -1.64
CDH9-201ENST00000231021 LAMC1P11047 1609 aa4.81□□□□□ -1.64
CDH9-201ENST00000231021 BTBD11A6QL63 1104 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 FOXN3O00409 490 aaPredicted RBP4.8□□□□□ -1.64
CDH9-201ENST00000231021 PLOD3O60568 738 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 KLHL41O60662 606 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 GUCA1CO95843 209 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 TPM3P06753 285 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 GARTP22102 1010 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 PSMA3P25788 255 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 ADSLP30566 484 aaPredicted RBP4.8□□□□□ -1.64
CDH9-201ENST00000231021 SOX5P35711 763 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 BRICD5Q6PL45 260 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 ANKRD35Q8N283 1001 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 TTC13Q8NBP0 860 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 GPR152Q8TDT2 470 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 C1orf74Q96LT6 269 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 DNAI2Q9GZS0 605 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 GRHPRQ9UBQ7 328 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 PTPRTO14522 1441 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 KIF16BQ96L93 1317 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 RIMBP2O15034 1052 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 DOK2O60496 412 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 PRKD3O94806 890 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 LARGE1O95461 756 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 HOXB1P14653 301 aaPredicted RBP4.8□□□□□ -1.64
CDH9-201ENST00000231021 PRIM2P49643 509 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 PPP2R3AQ06190 1150 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 RBM20Q5T481 1227 aaKnown RBP4.8□□□□□ -1.64
CDH9-201ENST00000231021 SYDE2Q5VT97 1194 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 CCDC73Q6ZRK6 1079 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 GJD3Q8N144 294 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 ADAM32Q8TC27 787 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 KCTD13Q8WZ19 329 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 RRP36Q96EU6 259 aaKnown RBP4.8□□□□□ -1.64
CDH9-201ENST00000231021 ACO2Q99798 780 aaKnown RBP4.8□□□□□ -1.64
CDH9-201ENST00000231021 MS4A5Q9H3V2 200 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 ELAC1Q9H777 363 aaKnown RBP4.8□□□□□ -1.64
CDH9-201ENST00000231021 KIAA1586Q9HCI6 787 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 COQ3Q9NZJ6 369 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 KLK14Q9P0G3 267 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 HERC5Q9UII4 1024 aaKnown RBP4.8□□□□□ -1.64
CDH9-201ENST00000231021 SRPK3Q9UPE1 567 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 CNPY2Q9Y2B0 182 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 LTBP3Q9NS15 1303 aa4.8□□□□□ -1.64
CDH9-201ENST00000231021 GPRASP1Q5JY77 1395 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 ZNF891A8MT65 544 aaPredicted RBP4.79□□□□□ -1.64
CDH9-201ENST00000231021 H2AFYO75367 372 aaKnown RBP4.79□□□□□ -1.64
CDH9-201ENST00000231021 PRPHP41219 470 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 ATP1A2P50993 1020 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 GABREP78334 506 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 RAB3GAP1Q15042 981 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 HAUS3Q68CZ6 603 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 CTR9Q6PD62 1173 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 FASTKD5Q7L8L6 764 aaKnown RBP4.79□□□□□ -1.64
CDH9-201ENST00000231021 NLRP14Q86W24 1093 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 ZBTB38Q8NAP3 1195 aaPredicted RBP4.79□□□□□ -1.64
CDH9-201ENST00000231021 PNMA1Q8ND90 353 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 GOT1L1Q8NHS2 421 aaPredicted RBP4.79□□□□□ -1.64
CDH9-201ENST00000231021 SDF4Q9BRK5 362 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 MYLK2Q9H1R3 596 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 RTEL1Q9NZ71 1219 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 STIM2Q9P246 746 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 BCORL1Q5H9F3 1711 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 REREQ9P2R6 1566 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 C17orf113A0A1B0GUU1 675 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 K7ENM7 598 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 DDX3XO00571 662 aaKnown RBP eCLIP4.79□□□□□ -1.64
CDH9-201ENST00000231021 SLC27A2O14975 620 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 AP1G1O43747 822 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 MT-ND3P03897 115 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 ZBTB48P10074 688 aaPredicted RBP4.79□□□□□ -1.64
CDH9-201ENST00000231021 CA8P35219 290 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 ZYXQ15942 572 aaKnown RBP4.79□□□□□ -1.64
CDH9-201ENST00000231021 SLC10A6Q3KNW5 377 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 GK5Q6ZS86 529 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 LIX1LQ8IVB5 337 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 COLGALT2Q8IYK4 626 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 NKAIN3Q8N8D7 197 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 ZBTB34Q8NCN2 500 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 ALKBH8Q96BT7 664 aaKnown RBP4.79□□□□□ -1.64
CDH9-201ENST00000231021 PRDM11Q9NQV5 511 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 CALCOCO1Q9P1Z2 691 aa4.79□□□□□ -1.64
CDH9-201ENST00000231021 SERTAD1Q9UHV2 236 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms