RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 NAPGQ99747 312 aaPredicted RBP23.08■■□□□ 1.29
SNX3-201ENST00000230085 ACBD3Q9H3P7 528 aa23.08■■□□□ 1.29
SNX3-201ENST00000230085 SAP30BPQ9UHR5 308 aaKnown RBP23.08■■□□□ 1.29
SNX3-201ENST00000230085 PCDHB6Q9Y5E3 794 aa23.08■■□□□ 1.29
SNX3-201ENST00000230085 PPP2R3BQ9Y5P8 575 aa23.08■■□□□ 1.29
SNX3-201ENST00000230085 PPP1R3GB7ZBB8 358 aa23.07■■□□□ 1.28
SNX3-201ENST00000230085 TEX33O43247 280 aa23.07■■□□□ 1.28
SNX3-201ENST00000230085 APPP05067 770 aa23.07■■□□□ 1.28
SNX3-201ENST00000230085 RXRAP19793 462 aa23.07■■□□□ 1.28
SNX3-201ENST00000230085 CDCA5Q96FF9 252 aa23.07■■□□□ 1.28
SNX3-201ENST00000230085 ATP8A2Q9NTI2 1148 aa23.07■■□□□ 1.28
SNX3-201ENST00000230085 BAZ2AQ9UIF9 1905 aaKnown RBP23.07■■□□□ 1.28
SNX3-201ENST00000230085 GYPCP04921 128 aa23.06■■□□□ 1.28
SNX3-201ENST00000230085 MCM3P25205 808 aa23.06■■□□□ 1.28
SNX3-201ENST00000230085 AARSP49588 968 aaKnown RBP eCLIP23.06■■□□□ 1.28
SNX3-201ENST00000230085 SRLQ86TD4 932 aa23.06■■□□□ 1.28
SNX3-201ENST00000230085 CSRNP2Q9H175 543 aa23.06■■□□□ 1.28
SNX3-201ENST00000230085 PAGE5Q96GU1 130 aa23.06■■□□□ 1.28
SNX3-201ENST00000230085 PNKPQ96T60 521 aa23.06■■□□□ 1.28
SNX3-201ENST00000230085 NAPBQ9H115 298 aa23.06■■□□□ 1.28
SNX3-201ENST00000230085 RASSF4Q9H2L5 321 aa23.06■■□□□ 1.28
SNX3-201ENST00000230085 MCM9Q9NXL9 1143 aa23.06■■□□□ 1.28
SNX3-201ENST00000230085 MYH1P12882 1939 aa23.05■■□□□ 1.28
SNX3-201ENST00000230085 CTAGE15A4D2H0 777 aa23.05■■□□□ 1.28
SNX3-201ENST00000230085 TRIM75PA6NK02 468 aa23.05■■□□□ 1.28
SNX3-201ENST00000230085 CTAGE8P0CG41 777 aa23.05■■□□□ 1.28
SNX3-201ENST00000230085 GUCY1A2P33402 732 aa23.05■■□□□ 1.28
SNX3-201ENST00000230085 ARHGAP25P42331 645 aa23.05■■□□□ 1.28
SNX3-201ENST00000230085 FSTL1Q12841 308 aa23.05■■□□□ 1.28
SNX3-201ENST00000230085 CYP26C1Q6V0L0 522 aa23.05■■□□□ 1.28
SNX3-201ENST00000230085 CTAGE6Q86UF2 777 aa23.05■■□□□ 1.28
SNX3-201ENST00000230085 CTAGE4Q8IX94 777 aa23.05■■□□□ 1.28
SNX3-201ENST00000230085 RNF41Q9H4P4 317 aaPredicted RBP23.05■■□□□ 1.28
SNX3-201ENST00000230085 ZNF408Q9H9D4 720 aa23.05■■□□□ 1.28
SNX3-201ENST00000230085 EFCC1Q9HA90 598 aa23.05■■□□□ 1.28
SNX3-201ENST00000230085 WTAPQ15007 396 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 PTPN21Q16825 1174 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 ZNF569Q5MCW4 686 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 MFSD6Q6ZSS7 791 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 RPGRIP1Q96KN7 1286 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 CSRNP1Q96S65 589 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 IRX2Q9BZI1 471 aaPredicted RBP23.04■■□□□ 1.28
SNX3-201ENST00000230085 PDE11AQ9HCR9 933 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 PASKQ96RG2 1323 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 MYO1CO00159 1063 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 SLURP2P0DP57 97 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 CD44P16070 742 aaKnown RBP23.04■■□□□ 1.28
SNX3-201ENST00000230085 XBP1P17861 261 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 EVX2Q03828 476 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 SPECC1Q5M775 1068 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 CTR9Q6PD62 1173 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 LEKR1Q6ZMV7 388 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 FANCBQ8NB91 859 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 ABCB6Q9NP58 842 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 LZTFL1Q9NQ48 299 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 RWDD2AQ9UIY3 292 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 ANAPC4Q9UJX5 808 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 FZD1Q9UP38 647 aa23.04■■□□□ 1.28
SNX3-201ENST00000230085 ATRNL1Q5VV63 1379 aa23.03■■□□□ 1.28
SNX3-201ENST00000230085 CTCFLQ8NI51 663 aaPredicted RBP23.03■■□□□ 1.28
SNX3-201ENST00000230085 ABHD10Q9NUJ1 306 aa23.03■■□□□ 1.28
SNX3-201ENST00000230085 TACC3Q9Y6A5 838 aa23.03■■□□□ 1.28
SNX3-201ENST00000230085 NAV1Q8NEY1 1877 aa23.03■■□□□ 1.28
SNX3-201ENST00000230085 TARSL2A2RTX5 802 aaKnown RBP23.02■■□□□ 1.28
SNX3-201ENST00000230085 USP17L12C9JPN9 530 aa23.02■■□□□ 1.28
SNX3-201ENST00000230085 USP17L21D6R901 530 aa23.02■■□□□ 1.28
SNX3-201ENST00000230085 CASP14P31944 242 aa23.02■■□□□ 1.28
SNX3-201ENST00000230085 LMAN1P49257 510 aa23.02■■□□□ 1.28
SNX3-201ENST00000230085 CASP8Q14790 479 aa23.02■■□□□ 1.28
SNX3-201ENST00000230085 SUPT20HL1Q3ZLR7 823 aa23.02■■□□□ 1.28
SNX3-201ENST00000230085 CST9Q5W186 159 aa23.02■■□□□ 1.28
SNX3-201ENST00000230085 MIGA2Q7L4E1 593 aa23.02■■□□□ 1.28
SNX3-201ENST00000230085 SLC35F6Q8N357 371 aa23.02■■□□□ 1.28
SNX3-201ENST00000230085 MYL10Q9BUA6 226 aa23.02■■□□□ 1.28
SNX3-201ENST00000230085 PHF20Q9BVI0 1012 aa23.02■■□□□ 1.28
SNX3-201ENST00000230085 NACAP1Q9BZK3 213 aa23.02■■□□□ 1.28
SNX3-201ENST00000230085 DHX36Q9H2U1 1008 aaKnown RBP23.02■■□□□ 1.28
SNX3-201ENST00000230085 KCNJ14Q9UNX9 436 aa23.02■■□□□ 1.28
SNX3-201ENST00000230085 CYP2D7A0A087X1C5 515 aa23.01■■□□□ 1.27
SNX3-201ENST00000230085 SMIM22K7EJ46 135 aa23.01■■□□□ 1.27
SNX3-201ENST00000230085 CELF2O95319 508 aaKnown RBP23.01■■□□□ 1.27
SNX3-201ENST00000230085 CYP2D6P10635 497 aa23.01■■□□□ 1.27
SNX3-201ENST00000230085 TDO2P48775 406 aa23.01■■□□□ 1.27
SNX3-201ENST00000230085 PRKG1Q13976 671 aa23.01■■□□□ 1.27
SNX3-201ENST00000230085 SSC5DA1L4H1 1573 aa23.01■■□□□ 1.27
SNX3-201ENST00000230085 A0A087X0B3 334 aa23.01■■□□□ 1.27
SNX3-201ENST00000230085 ERICH2A1L162 156 aa23.01■■□□□ 1.27
SNX3-201ENST00000230085 UBE2Q2LH0YL09 131 aa23.01■■□□□ 1.27
SNX3-201ENST00000230085 FXR1P51114 621 aaKnown RBP eCLIP23.01■■□□□ 1.27
SNX3-201ENST00000230085 NR5A1Q13285 461 aa23.01■■□□□ 1.27
SNX3-201ENST00000230085 USP49Q70CQ1 688 aa23.01■■□□□ 1.27
SNX3-201ENST00000230085 GRAMD1CQ8IYS0 662 aa23.01■■□□□ 1.27
SNX3-201ENST00000230085 ZNF654Q8IZM8 581 aa23.01■■□□□ 1.27
SNX3-201ENST00000230085 PI4KBQ9UBF8 816 aa23.01■■□□□ 1.27
SNX3-201ENST00000230085 DDX60LQ5H9U9 1706 aaKnown RBP23.01■■□□□ 1.27
SNX3-201ENST00000230085 PRPF3O43395 683 aaKnown RBP23■■□□□ 1.27
SNX3-201ENST00000230085 TRAPPC10P48553 1259 aa23■■□□□ 1.27
SNX3-201ENST00000230085 ERVK-24P63145 666 aa23■■□□□ 1.27
SNX3-201ENST00000230085 FUT2Q10981 343 aa23■■□□□ 1.27
SNX3-201ENST00000230085 SEC23AQ15436 765 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms