RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 AP5M1Q9H0R1 490 aa16.59■□□□□ 0.25
GPN3-201ENST00000228827 VTA1Q9NP79 307 aa16.59■□□□□ 0.25
GPN3-201ENST00000228827 MAD2L2Q9UI95 211 aa16.59■□□□□ 0.25
GPN3-201ENST00000228827 GNEQ9Y223 722 aaKnown RBP16.59■□□□□ 0.25
GPN3-201ENST00000228827 ABCB11O95342 1321 aa16.59■□□□□ 0.25
GPN3-201ENST00000228827 RANBP2P49792 3224 aaKnown RBP16.58■□□□□ 0.24
GPN3-201ENST00000228827 TRIM43BA6NCK2 446 aa16.58■□□□□ 0.24
GPN3-201ENST00000228827 KLRF2D3W0D1 207 aa16.58■□□□□ 0.24
GPN3-201ENST00000228827 CTAGE5O15320 804 aa16.58■□□□□ 0.24
GPN3-201ENST00000228827 ANTXR2P58335 489 aa16.58■□□□□ 0.24
GPN3-201ENST00000228827 PDE4DQ08499 809 aa16.58■□□□□ 0.24
GPN3-201ENST00000228827 SART3Q15020 963 aaKnown RBP16.58■□□□□ 0.24
GPN3-201ENST00000228827 TMEM67Q5HYA8 995 aa16.58■□□□□ 0.24
GPN3-201ENST00000228827 IQSEC1Q6DN90 963 aa16.58■□□□□ 0.24
GPN3-201ENST00000228827 MB21D2Q8IYB1 491 aaPredicted RBP16.58■□□□□ 0.24
GPN3-201ENST00000228827 BADQ92934 168 aa16.58■□□□□ 0.24
GPN3-201ENST00000228827 TRIM43Q96BQ3 446 aaPredicted RBP16.58■□□□□ 0.24
GPN3-201ENST00000228827 GLT1D1Q96MS3 346 aa16.58■□□□□ 0.24
GPN3-201ENST00000228827 ANO2Q9NQ90 1003 aa16.58■□□□□ 0.24
GPN3-201ENST00000228827 DNAH12Q6ZR08 3092 aa16.57■□□□□ 0.24
GPN3-201ENST00000228827 CLTBP09497 229 aa16.57■□□□□ 0.24
GPN3-201ENST00000228827 BMP2KLQ5H9B9 411 aa16.57■□□□□ 0.24
GPN3-201ENST00000228827 PALM3A6NDB9 673 aaPredicted RBP16.56■□□□□ 0.24
GPN3-201ENST00000228827 SLC27A2O14975 620 aa16.56■□□□□ 0.24
GPN3-201ENST00000228827 GRM4Q14833 912 aa16.56■□□□□ 0.24
GPN3-201ENST00000228827 FSCN1Q16658 493 aaKnown RBP16.56■□□□□ 0.24
GPN3-201ENST00000228827 HOMER1Q86YM7 354 aa16.56■□□□□ 0.24
GPN3-201ENST00000228827 RGS22Q8NE09 1264 aa16.56■□□□□ 0.24
GPN3-201ENST00000228827 CCDC136Q96JN2 1154 aa16.56■□□□□ 0.24
GPN3-201ENST00000228827 MPHOSPH6Q99547 160 aaKnown RBP16.56■□□□□ 0.24
GPN3-201ENST00000228827 WDR11Q9BZH6 1224 aa16.56■□□□□ 0.24
GPN3-201ENST00000228827 GPHNQ9NQX3 736 aaPredicted RBP16.56■□□□□ 0.24
GPN3-201ENST00000228827 MRPL11Q9Y3B7 192 aaKnown RBP16.56■□□□□ 0.24
GPN3-201ENST00000228827 ITGB8P26012 769 aa16.55■□□□□ 0.24
GPN3-201ENST00000228827 SLC35G1Q2M3R5 365 aa16.55■□□□□ 0.24
GPN3-201ENST00000228827 CATIPQ7Z7H3 387 aa16.55■□□□□ 0.24
GPN3-201ENST00000228827 MCF2L2Q86YR7 1114 aa16.55■□□□□ 0.24
GPN3-201ENST00000228827 DNERQ8NFT8 737 aa16.55■□□□□ 0.24
GPN3-201ENST00000228827 SYTL5Q8TDW5 730 aaPredicted RBP16.55■□□□□ 0.24
GPN3-201ENST00000228827 IGDCC4Q8TDY8 1250 aa16.55■□□□□ 0.24
GPN3-201ENST00000228827 TAAR1Q96RJ0 339 aa16.55■□□□□ 0.24
GPN3-201ENST00000228827 TMEM39AQ9NV64 488 aa16.55■□□□□ 0.24
GPN3-201ENST00000228827 ELP1O95163 1332 aa16.55■□□□□ 0.24
GPN3-201ENST00000228827 SMCHD1A6NHR9 2005 aa16.55■□□□□ 0.24
GPN3-201ENST00000228827 LRRC37A2A6NM11 1700 aa16.55■□□□□ 0.24
GPN3-201ENST00000228827 LOC102724159A0A0B4J2E5 919 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 A0A0U1RQG5 324 aaPredicted RBP16.54■□□□□ 0.24
GPN3-201ENST00000228827 DCDC2CA8MYV0 355 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 PPP1R11O60927 126 aaPredicted RBP16.54■□□□□ 0.24
GPN3-201ENST00000228827 NKX3-2P78367 333 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 FAAP100Q0VG06 881 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 COL9A3Q14050 684 aaPredicted RBP16.54■□□□□ 0.24
GPN3-201ENST00000228827 PWP2Q15269 919 aaKnown RBP16.54■□□□□ 0.24
GPN3-201ENST00000228827 DUSP28Q4G0W2 176 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 CREB3L3Q68CJ9 461 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 CASC1Q6TDU7 716 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 CXCL17Q6UXB2 119 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 ANKRD33Q7Z3H0 272 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 PIGSQ96S52 555 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 MYL10Q9BUA6 226 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 AMNQ9BXJ7 453 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 COL20A1Q9P218 1284 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 TRIOBPQ9H2D6 2365 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 ARVCFO00192 962 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 ZBTB5O15062 677 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 PRC1O43663 620 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 ZEB2O60315 1214 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 CFBP00751 764 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 EDNRBP24530 442 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 TROAPQ12815 778 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 PIBF1Q8WXW3 757 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 MTMR8Q96EF0 704 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 TOX2Q96NM4 488 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 LY9Q9HBG7 655 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 Q9Y3F1 56 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 PCDHA1Q9Y5I3 950 aa16.54■□□□□ 0.24
GPN3-201ENST00000228827 LCTP09848 1927 aa16.53■□□□□ 0.24
GPN3-201ENST00000228827 RBM47A0AV96 593 aaKnown RBP16.53■□□□□ 0.24
GPN3-201ENST00000228827 B4DLN1 442 aa16.53■□□□□ 0.24
GPN3-201ENST00000228827 RAG1P15918 1043 aa16.53■□□□□ 0.24
GPN3-201ENST00000228827 CDK7P50613 346 aa16.53■□□□□ 0.24
GPN3-201ENST00000228827 MRPL12P52815 198 aaKnown RBP16.53■□□□□ 0.24
GPN3-201ENST00000228827 NECTIN1Q15223 517 aa16.53■□□□□ 0.24
GPN3-201ENST00000228827 LRIT3Q3SXY7 679 aa16.53■□□□□ 0.24
GPN3-201ENST00000228827 NFXL1Q6ZNB6 911 aa16.53■□□□□ 0.24
GPN3-201ENST00000228827 OR6J1Q8NGC5 347 aa16.53■□□□□ 0.24
GPN3-201ENST00000228827 MCM3APO60318 1980 aa16.52■□□□□ 0.24
GPN3-201ENST00000228827 MROH7Q68CQ1 1323 aa16.52■□□□□ 0.24
GPN3-201ENST00000228827 OPLAHO14841 1288 aa16.52■□□□□ 0.23
GPN3-201ENST00000228827 KIAA0355O15063 1070 aa16.52■□□□□ 0.23
GPN3-201ENST00000228827 EIF2AK2P19525 551 aaKnown RBP16.52■□□□□ 0.23
GPN3-201ENST00000228827 MCM5P33992 734 aa16.52■□□□□ 0.23
GPN3-201ENST00000228827 PSMC6P62333 389 aa16.52■□□□□ 0.23
GPN3-201ENST00000228827 PPP2R5BQ15173 497 aa16.52■□□□□ 0.23
GPN3-201ENST00000228827 ARHGEF16Q5VV41 709 aa16.52■□□□□ 0.23
GPN3-201ENST00000228827 ZNF654Q8IZM8 581 aa16.52■□□□□ 0.23
GPN3-201ENST00000228827 NSUN6Q8TEA1 469 aaKnown RBP16.52■□□□□ 0.23
GPN3-201ENST00000228827 COPS5Q92905 334 aa16.52■□□□□ 0.23
GPN3-201ENST00000228827 RMDN3Q96TC7 470 aa16.52■□□□□ 0.23
GPN3-201ENST00000228827 LRRC2Q9BYS8 371 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms