RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 MFSD14CQ5VZR4 134 aa16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 NECAB1Q8N987 351 aa16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 RGS22Q8NE09 1264 aa16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 GPKOWQ92917 476 aaPredicted RBP eCLIP16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 PHKBQ93100 1093 aa16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 TINF2Q9BSI4 451 aa16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 UPF2Q9HAU5 1272 aaKnown RBP16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 COL20A1Q9P218 1284 aa16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 SEC63Q9UGP8 760 aaKnown RBP16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 LCTP09848 1927 aa16.65■□□□□ 0.26
SUPT4H1-201ENST00000225504 CCDC196A0A1B0GTZ2 297 aa16.65■□□□□ 0.26
SUPT4H1-201ENST00000225504 POTEFA5A3E0 1075 aa16.65■□□□□ 0.26
SUPT4H1-201ENST00000225504 CFBP00751 764 aa16.65■□□□□ 0.26
SUPT4H1-201ENST00000225504 SCRN1Q12765 414 aa16.65■□□□□ 0.26
SUPT4H1-201ENST00000225504 ME3Q16798 604 aa16.65■□□□□ 0.26
SUPT4H1-201ENST00000225504 SYTL5Q8TDW5 730 aaPredicted RBP16.65■□□□□ 0.26
SUPT4H1-201ENST00000225504 TAAR1Q96RJ0 339 aa16.65■□□□□ 0.26
SUPT4H1-201ENST00000225504 RNF208Q9H0X6 261 aa16.65■□□□□ 0.26
SUPT4H1-201ENST00000225504 PFKFB2O60825 505 aa16.64■□□□□ 0.25
SUPT4H1-201ENST00000225504 HOXA13P31271 388 aaPredicted RBP16.64■□□□□ 0.25
SUPT4H1-201ENST00000225504 SOX10P56693 466 aa16.64■□□□□ 0.25
SUPT4H1-201ENST00000225504 ANKRD1Q15327 319 aa16.64■□□□□ 0.25
SUPT4H1-201ENST00000225504 PKN1Q16512 942 aa16.64■□□□□ 0.25
SUPT4H1-201ENST00000225504 TYW1BQ6NUM6 668 aa16.64■□□□□ 0.25
SUPT4H1-201ENST00000225504 MAMDC4Q6UXC1 1216 aa16.64■□□□□ 0.25
SUPT4H1-201ENST00000225504 ZNF467Q7Z7K2 595 aaPredicted RBP16.64■□□□□ 0.25
SUPT4H1-201ENST00000225504 MCF2L2Q86YR7 1114 aa16.64■□□□□ 0.25
SUPT4H1-201ENST00000225504 RPTORQ8N122 1335 aa16.64■□□□□ 0.25
SUPT4H1-201ENST00000225504 IFNAR1P17181 557 aa16.63■□□□□ 0.25
SUPT4H1-201ENST00000225504 HSD17B4P51659 736 aa16.63■□□□□ 0.25
SUPT4H1-201ENST00000225504 WWC2Q6AWC2 1192 aa16.63■□□□□ 0.25
SUPT4H1-201ENST00000225504 HEATR3Q7Z4Q2 680 aa16.63■□□□□ 0.25
SUPT4H1-201ENST00000225504 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.63■□□□□ 0.25
SUPT4H1-201ENST00000225504 SLKQ9H2G2 1235 aaPredicted RBP16.63■□□□□ 0.25
SUPT4H1-201ENST00000225504 HMX1Q9NP08 348 aaPredicted RBP16.63■□□□□ 0.25
SUPT4H1-201ENST00000225504 MCM3APO60318 1980 aa16.63■□□□□ 0.25
SUPT4H1-201ENST00000225504 PRPF3O43395 683 aaKnown RBP16.62■□□□□ 0.25
SUPT4H1-201ENST00000225504 CYBAP13498 195 aa16.62■□□□□ 0.25
SUPT4H1-201ENST00000225504 EN2P19622 333 aaPredicted RBP16.62■□□□□ 0.25
SUPT4H1-201ENST00000225504 CNGA1P29973 690 aa16.62■□□□□ 0.25
SUPT4H1-201ENST00000225504 TRAF1Q13077 416 aa16.62■□□□□ 0.25
SUPT4H1-201ENST00000225504 ARMCX2Q7L311 632 aa16.62■□□□□ 0.25
SUPT4H1-201ENST00000225504 DEFB118Q96PH6 123 aa16.62■□□□□ 0.25
SUPT4H1-201ENST00000225504 TMEM106CQ9BVX2 250 aa16.62■□□□□ 0.25
SUPT4H1-201ENST00000225504 SLC26A6Q9BXS9 759 aa16.62■□□□□ 0.25
SUPT4H1-201ENST00000225504 PAK6Q9NQU5 681 aaPredicted RBP16.62■□□□□ 0.25
SUPT4H1-201ENST00000225504 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.62■□□□□ 0.25
SUPT4H1-201ENST00000225504 STXBP3O00186 592 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 CTDNEP1O95476 244 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 ZNF865P0CJ78 1059 aaPredicted RBP16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 ALDH5A1P51649 535 aaPredicted RBP16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 GHRHRQ02643 423 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 ST3GAL1Q11201 340 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 PFKFB3Q16875 520 aaPredicted RBP16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 USP17L6PQ6QN14 398 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 SHISA4Q96DD7 197 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 MEIS2O14770 477 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 ADAMTS3O15072 1205 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 CD2BP2O95400 341 aaKnown RBP16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 GJB1P08034 283 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 SCG2P13521 617 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 RABEP1Q15276 862 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 ANO1Q5XXA6 986 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 EEPD1Q7L9B9 569 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 FCHSD1Q86WN1 690 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 MSL3Q8N5Y2 521 aaKnown RBP16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 KATNBL1Q9H079 304 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 LIMCH1Q9UPQ0 1083 aa16.61■□□□□ 0.25
SUPT4H1-201ENST00000225504 KIAA0100Q14667 2235 aaKnown RBP16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 SYNGAP1Q96PV0 1343 aa16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 ASB14A6NK59 587 aa16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 GCOM1H8Y6P7 765 aaPredicted RBP16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 CPLX1O14810 134 aa16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 POLR2MP0CAP2 368 aa16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 SSRP1Q08945 709 aaKnown RBP16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 ACVR2BQ13705 512 aa16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 LHX8Q68G74 356 aa16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 MORC4Q8TE76 937 aa16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 AIFM3Q96NN9 605 aa16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 RMDN3Q96TC7 470 aa16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 RNF26Q9BY78 433 aaPredicted RBP16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 MAF1Q9H063 256 aa16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 PSTPIP2Q9H939 334 aa16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 PDGFCQ9NRA1 345 aa16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 BARHL2Q9NY43 387 aa16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 ADD3Q9UEY8 706 aaKnown RBP16.6■□□□□ 0.25
SUPT4H1-201ENST00000225504 SGPL1O95470 568 aa16.59■□□□□ 0.25
SUPT4H1-201ENST00000225504 NAPAP54920 295 aa16.59■□□□□ 0.25
SUPT4H1-201ENST00000225504 UBE2SQ16763 222 aa16.59■□□□□ 0.25
SUPT4H1-201ENST00000225504 TMEM63BQ5T3F8 832 aa16.59■□□□□ 0.25
SUPT4H1-201ENST00000225504 DNERQ8NFT8 737 aa16.59■□□□□ 0.25
SUPT4H1-201ENST00000225504 U2AF1L4Q8WU68 220 aaKnown RBP16.59■□□□□ 0.25
SUPT4H1-201ENST00000225504 CNPY2Q9Y2B0 182 aa16.59■□□□□ 0.25
SUPT4H1-201ENST00000225504 ADCY6O43306 1168 aa16.58■□□□□ 0.24
SUPT4H1-201ENST00000225504 EIF2AK2P19525 551 aaKnown RBP16.58■□□□□ 0.24
SUPT4H1-201ENST00000225504 GJA8P48165 433 aa16.58■□□□□ 0.24
SUPT4H1-201ENST00000225504 AKAP17AQ02040 695 aaKnown RBP16.58■□□□□ 0.24
SUPT4H1-201ENST00000225504 SAMD3Q8N6K7 520 aa16.58■□□□□ 0.24
SUPT4H1-201ENST00000225504 NSUN6Q8TEA1 469 aaKnown RBP16.58■□□□□ 0.24
SUPT4H1-201ENST00000225504 GTF3C6Q969F1 213 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms