RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ZSWIM6Q9HCJ5 1215 aa14.71□□□□□ -0.05
LSM5-201ENST00000223084 ZHX1Q9UKY1 873 aaPredicted RBP14.71□□□□□ -0.05
LSM5-201ENST00000223084 CNPY2Q9Y2B0 182 aa14.71□□□□□ -0.05
LSM5-201ENST00000223084 MRPL11Q9Y3B7 192 aaKnown RBP14.71□□□□□ -0.05
LSM5-201ENST00000223084 PCDHA1Q9Y5I3 950 aa14.71□□□□□ -0.05
LSM5-201ENST00000223084 FRMPD3Q5JV73 1810 aa14.71□□□□□ -0.06
LSM5-201ENST00000223084 hCG_1642624A0A1W2PR95 340 aa14.7□□□□□ -0.06
LSM5-201ENST00000223084 OPLAHO14841 1288 aa14.7□□□□□ -0.06
LSM5-201ENST00000223084 GNAQP50148 359 aa14.7□□□□□ -0.06
LSM5-201ENST00000223084 RTN1Q16799 776 aa14.7□□□□□ -0.06
LSM5-201ENST00000223084 TMTC3Q6ZXV5 915 aa14.7□□□□□ -0.06
LSM5-201ENST00000223084 RUFY3Q7L099 469 aa14.7□□□□□ -0.06
LSM5-201ENST00000223084 UBE2Q1Q7Z7E8 422 aa14.7□□□□□ -0.06
LSM5-201ENST00000223084 LENG1Q96BZ8 264 aaPredicted RBP14.7□□□□□ -0.06
LSM5-201ENST00000223084 RRP36Q96EU6 259 aaKnown RBP14.7□□□□□ -0.06
LSM5-201ENST00000223084 LZTS2Q9BRK4 669 aa14.7□□□□□ -0.06
LSM5-201ENST00000223084 NRBP1Q9UHY1 535 aa14.7□□□□□ -0.06
LSM5-201ENST00000223084 ASB14A6NK59 587 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 GOLGA8AA7E2F4 631 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 GOLGA8BA8MQT2 603 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 CFBP00751 764 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 SMARCA1P28370 1054 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 CDC27P30260 824 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 ALDH5A1P51649 535 aaPredicted RBP14.69□□□□□ -0.06
LSM5-201ENST00000223084 ACVR2BQ13705 512 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 TOB2Q14106 344 aaPredicted RBP14.69□□□□□ -0.06
LSM5-201ENST00000223084 C8orf34Q49A92 452 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 PRPF38BQ5VTL8 546 aaKnown RBP14.69□□□□□ -0.06
LSM5-201ENST00000223084 EEPD1Q7L9B9 569 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 RGS22Q8NE09 1264 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 SYTL5Q8TDW5 730 aaPredicted RBP14.69□□□□□ -0.06
LSM5-201ENST00000223084 PAWRQ96IZ0 340 aaKnown RBP14.69□□□□□ -0.06
LSM5-201ENST00000223084 TAAR1Q96RJ0 339 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 LARP6Q9BRS8 491 aaKnown RBP14.69□□□□□ -0.06
LSM5-201ENST00000223084 TM6SF1Q9BZW5 370 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 KATNBL1Q9H079 304 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 FAM217BQ9NTX9 383 aaPredicted RBP14.69□□□□□ -0.06
LSM5-201ENST00000223084 COL20A1Q9P218 1284 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 CYP46A1Q9Y6A2 500 aa14.69□□□□□ -0.06
LSM5-201ENST00000223084 MSCO60682 206 aa14.68□□□□□ -0.06
LSM5-201ENST00000223084 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
LSM5-201ENST00000223084 MCF2L2Q86YR7 1114 aa14.68□□□□□ -0.06
LSM5-201ENST00000223084 FBXO16Q8IX29 292 aaPredicted RBP14.68□□□□□ -0.06
LSM5-201ENST00000223084 AGXT2Q9BYV1 514 aa14.68□□□□□ -0.06
LSM5-201ENST00000223084 ABHD16BQ9H3Z7 469 aa14.68□□□□□ -0.06
LSM5-201ENST00000223084 RBM28Q9NW13 759 aaKnown RBP14.68□□□□□ -0.06
LSM5-201ENST00000223084 ADD3Q9UEY8 706 aaKnown RBP14.68□□□□□ -0.06
LSM5-201ENST00000223084 ADCY6O43306 1168 aa14.67□□□□□ -0.06
LSM5-201ENST00000223084 AKR1A1P14550 325 aa14.67□□□□□ -0.06
LSM5-201ENST00000223084 HOXA13P31271 388 aaPredicted RBP14.67□□□□□ -0.06
LSM5-201ENST00000223084 ADD1P35611 737 aaKnown RBP14.67□□□□□ -0.06
LSM5-201ENST00000223084 METAP2P50579 478 aaKnown RBP eCLIP14.67□□□□□ -0.06
LSM5-201ENST00000223084 CCDC144BQ3MJ40 725 aa14.67□□□□□ -0.06
LSM5-201ENST00000223084 GJC2Q5T442 439 aaPredicted RBP14.67□□□□□ -0.06
LSM5-201ENST00000223084 FBXL16Q8N461 479 aa14.67□□□□□ -0.06
LSM5-201ENST00000223084 MORC4Q8TE76 937 aa14.67□□□□□ -0.06
LSM5-201ENST00000223084 PDGFCQ9NRA1 345 aa14.67□□□□□ -0.06
LSM5-201ENST00000223084 PDRG1Q9NUG6 133 aa14.67□□□□□ -0.06
LSM5-201ENST00000223084 SEC63Q9UGP8 760 aaKnown RBP14.67□□□□□ -0.06
LSM5-201ENST00000223084 FAM184BQ9ULE4 1060 aa14.67□□□□□ -0.06
LSM5-201ENST00000223084 CNTNAP5Q8WYK1 1306 aa14.66□□□□□ -0.06
LSM5-201ENST00000223084 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.66□□□□□ -0.06
LSM5-201ENST00000223084 PGK1P00558 417 aa14.66□□□□□ -0.06
LSM5-201ENST00000223084 RARBP10826 455 aa14.66□□□□□ -0.06
LSM5-201ENST00000223084 CAPN2P17655 700 aa14.66□□□□□ -0.06
LSM5-201ENST00000223084 PTGS1P23219 599 aa14.66□□□□□ -0.06
LSM5-201ENST00000223084 HSD17B4P51659 736 aa14.66□□□□□ -0.06
LSM5-201ENST00000223084 FUT2Q10981 343 aa14.66□□□□□ -0.06
LSM5-201ENST00000223084 NECAB2Q7Z6G3 386 aa14.66□□□□□ -0.06
LSM5-201ENST00000223084 ANKLE1Q8NAG6 615 aa14.66□□□□□ -0.06
LSM5-201ENST00000223084 GTF3C3Q9Y5Q9 886 aa14.66□□□□□ -0.06
LSM5-201ENST00000223084 GCOM1H8Y6P7 765 aaPredicted RBP14.65□□□□□ -0.06
LSM5-201ENST00000223084 PPFIA3O75145 1194 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 POLR2MP0CAP2 368 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 PDIA3P30101 505 aaKnown RBP14.65□□□□□ -0.06
LSM5-201ENST00000223084 ADCYAP1R1P41586 468 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 RCAN1P53805 252 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 ANAPC15P60006 121 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 CCT2P78371 535 aaKnown RBP14.65□□□□□ -0.06
LSM5-201ENST00000223084 IRX5P78411 483 aaPredicted RBP14.65□□□□□ -0.06
LSM5-201ENST00000223084 PDE4DQ08499 809 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 TRAF1Q13077 416 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 LRRC41Q15345 812 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 TMEM63BQ5T3F8 832 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 TAPT1Q6NXT6 567 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 FCHSD1Q86WN1 690 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 DNERQ8NFT8 737 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 GPKOWQ92917 476 aaPredicted RBP eCLIP14.65□□□□□ -0.06
LSM5-201ENST00000223084 RMDN3Q96TC7 470 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 C11orf49Q9H6J7 331 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 XPNPEP3Q9NQH7 507 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 V9GY48 417 aaPredicted RBP14.65□□□□□ -0.06
LSM5-201ENST00000223084 LRRC37A2A6NM11 1700 aa14.65□□□□□ -0.06
LSM5-201ENST00000223084 EIF5BO60841 1220 aaKnown RBP14.64□□□□□ -0.07
LSM5-201ENST00000223084 EIF2AK2P19525 551 aaKnown RBP14.64□□□□□ -0.07
LSM5-201ENST00000223084 EDNRBP24530 442 aa14.64□□□□□ -0.07
LSM5-201ENST00000223084 EVCP57679 992 aa14.64□□□□□ -0.07
LSM5-201ENST00000223084 GHRHRQ02643 423 aa14.64□□□□□ -0.07
LSM5-201ENST00000223084 ARHGEF16Q5VV41 709 aa14.64□□□□□ -0.07
LSM5-201ENST00000223084 NOL8Q76FK4 1167 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms