RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 HMGCS2P54868 508 aa17.2■□□□□ 0.34
PAF1-201ENST00000221265 NOL9Q5SY16 702 aaKnown RBP17.2■□□□□ 0.34
PAF1-201ENST00000221265 CCDC186Q7Z3E2 898 aa17.2■□□□□ 0.34
PAF1-201ENST00000221265 ZC3H15Q8WU90 426 aaKnown RBP17.2■□□□□ 0.34
PAF1-201ENST00000221265 ANO10Q9NW15 660 aa17.2■□□□□ 0.34
PAF1-201ENST00000221265 NRBP1Q9UHY1 535 aa17.2■□□□□ 0.34
PAF1-201ENST00000221265 HPSEQ9Y251 543 aa17.2■□□□□ 0.34
PAF1-201ENST00000221265 UQCRHLA0A096LP55 91 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 MEIS2O14770 477 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 UQCRHP07919 91 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 MRPL12P52815 198 aaKnown RBP17.19■□□□□ 0.34
PAF1-201ENST00000221265 FAM160B2Q86V87 743 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 DHX40Q8IX18 779 aaKnown RBP17.19■□□□□ 0.34
PAF1-201ENST00000221265 SDF4Q9BRK5 362 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 TANGO6Q9C0B7 1094 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 COL11A1P12107 1806 aaPredicted RBP17.19■□□□□ 0.34
PAF1-201ENST00000221265 VWA3AA6NCI4 1184 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 IQCA1LA6NCM1 817 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 GOLGA6L19H0YKK7 550 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 CCNT1O60563 726 aaKnown RBP17.19■□□□□ 0.34
PAF1-201ENST00000221265 ZNF202O95125 648 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 MAP3K9P80192 1104 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 DNTTIP2Q5QJE6 756 aaKnown RBP17.19■□□□□ 0.34
PAF1-201ENST00000221265 SARM1Q6SZW1 724 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 NEK8Q86SG6 692 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 DRC7Q8IY82 874 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 RPAP3Q9H6T3 665 aaPredicted RBP17.19■□□□□ 0.34
PAF1-201ENST00000221265 AS3MTQ9HBK9 375 aa17.19■□□□□ 0.34
PAF1-201ENST00000221265 FAM237AA0A1B0GTK4 181 aa17.18■□□□□ 0.34
PAF1-201ENST00000221265 BMP15O95972 392 aa17.18■□□□□ 0.34
PAF1-201ENST00000221265 FMR1Q06787 632 aaKnown RBP eCLIP17.18■□□□□ 0.34
PAF1-201ENST00000221265 EPSTI1Q96J88 318 aa17.18■□□□□ 0.34
PAF1-201ENST00000221265 CLMNQ96JQ2 1002 aa17.18■□□□□ 0.34
PAF1-201ENST00000221265 SLF1Q9BQI6 1058 aa17.18■□□□□ 0.34
PAF1-201ENST00000221265 AFG3L2Q9Y4W6 797 aa17.18■□□□□ 0.34
PAF1-201ENST00000221265 MORC2Q9Y6X9 1032 aaPredicted RBP17.18■□□□□ 0.34
PAF1-201ENST00000221265 PPP1R12BO60237 982 aaPredicted RBP17.17■□□□□ 0.34
PAF1-201ENST00000221265 FLOT1O75955 427 aa17.17■□□□□ 0.34
PAF1-201ENST00000221265 CDC25BP30305 580 aa17.17■□□□□ 0.34
PAF1-201ENST00000221265 HOXA13P31271 388 aaPredicted RBP17.17■□□□□ 0.34
PAF1-201ENST00000221265 USP14P54578 494 aa17.17■□□□□ 0.34
PAF1-201ENST00000221265 TBC1D5Q92609 795 aa17.17■□□□□ 0.34
PAF1-201ENST00000221265 WNK4Q96J92 1243 aa17.17■□□□□ 0.34
PAF1-201ENST00000221265 ZNF536O15090 1300 aa17.17■□□□□ 0.34
PAF1-201ENST00000221265 TDP2O95551 362 aa17.17■□□□□ 0.34
PAF1-201ENST00000221265 SYKP43405 635 aa17.17■□□□□ 0.34
PAF1-201ENST00000221265 ZNF579Q8NAF0 562 aaKnown RBP17.17■□□□□ 0.34
PAF1-201ENST00000221265 PRPF38AQ8NAV1 312 aaKnown RBP17.17■□□□□ 0.34
PAF1-201ENST00000221265 FERMT2Q96AC1 680 aa17.17■□□□□ 0.34
PAF1-201ENST00000221265 AGBL1Q96MI9 1066 aa17.17■□□□□ 0.34
PAF1-201ENST00000221265 KCNH3Q9ULD8 1083 aa17.17■□□□□ 0.34
PAF1-201ENST00000221265 SOCS7O14512 581 aa17.16■□□□□ 0.34
PAF1-201ENST00000221265 MAP1SQ66K74 1059 aaPredicted RBP17.16■□□□□ 0.34
PAF1-201ENST00000221265 LDHDQ86WU2 507 aa17.16■□□□□ 0.34
PAF1-201ENST00000221265 KIAA1468Q9P260 1216 aa17.16■□□□□ 0.34
PAF1-201ENST00000221265 CLEC11AQ9Y240 323 aa17.16■□□□□ 0.34
PAF1-201ENST00000221265 A0A087X0B3 334 aa17.16■□□□□ 0.34
PAF1-201ENST00000221265 TRAF5O00463 557 aa17.16■□□□□ 0.34
PAF1-201ENST00000221265 POTEDQ86YR6 584 aa17.16■□□□□ 0.34
PAF1-201ENST00000221265 CEP57L1Q8IYX8 460 aa17.16■□□□□ 0.34
PAF1-201ENST00000221265 PDILTQ8N807 584 aa17.16■□□□□ 0.34
PAF1-201ENST00000221265 SYMPKQ92797 1274 aaKnown RBP17.16■□□□□ 0.34
PAF1-201ENST00000221265 ELP3Q9H9T3 547 aa17.16■□□□□ 0.34
PAF1-201ENST00000221265 BECN2A8MW95 431 aa17.15■□□□□ 0.34
PAF1-201ENST00000221265 SLC37A4O43826 429 aa17.15■□□□□ 0.34
PAF1-201ENST00000221265 LRMPQ12912 555 aa17.15■□□□□ 0.34
PAF1-201ENST00000221265 TTLL12Q14166 644 aaPredicted RBP17.15■□□□□ 0.34
PAF1-201ENST00000221265 LONRF3Q496Y0 759 aa17.15■□□□□ 0.34
PAF1-201ENST00000221265 PNMA8AQ86V59 439 aaPredicted RBP17.15■□□□□ 0.34
PAF1-201ENST00000221265 ANO3Q9BYT9 981 aa17.15■□□□□ 0.34
PAF1-201ENST00000221265 PPP1R9AQ9ULJ8 1098 aa17.15■□□□□ 0.34
PAF1-201ENST00000221265 CSADQ9Y600 493 aa17.15■□□□□ 0.34
PAF1-201ENST00000221265 NEMFO60524 1076 aa17.14■□□□□ 0.33
PAF1-201ENST00000221265 CDC25AP30304 524 aa17.14■□□□□ 0.33
PAF1-201ENST00000221265 IREB2P48200 963 aaKnown RBP17.14■□□□□ 0.33
PAF1-201ENST00000221265 CCDC144BQ3MJ40 725 aa17.14■□□□□ 0.33
PAF1-201ENST00000221265 CPXCR1Q8N123 301 aa17.14■□□□□ 0.33
PAF1-201ENST00000221265 MRFAP1L1Q96HT8 127 aa17.14■□□□□ 0.33
PAF1-201ENST00000221265 C12orf42Q96LP6 360 aa17.14■□□□□ 0.33
PAF1-201ENST00000221265 C19orf81C9J6K1 198 aa17.14■□□□□ 0.33
PAF1-201ENST00000221265 POLR2DO15514 142 aaKnown RBP17.14■□□□□ 0.33
PAF1-201ENST00000221265 ARL6IP4Q66PJ3 421 aaKnown RBP17.14■□□□□ 0.33
PAF1-201ENST00000221265 AOPEPQ8N6M6 819 aa17.14■□□□□ 0.33
PAF1-201ENST00000221265 ATG4CQ96DT6 458 aa17.14■□□□□ 0.33
PAF1-201ENST00000221265 GLT8D2Q9H1C3 349 aa17.14■□□□□ 0.33
PAF1-201ENST00000221265 RRAGCQ9HB90 399 aa17.14■□□□□ 0.33
PAF1-201ENST00000221265 SLC38A10Q9HBR0 1119 aa17.14■□□□□ 0.33
PAF1-201ENST00000221265 RAVER2Q9HCJ3 691 aaKnown RBP17.14■□□□□ 0.33
PAF1-201ENST00000221265 CCPG1Q9ULG6 757 aa17.14■□□□□ 0.33
PAF1-201ENST00000221265 PP2D1A8MPX8 630 aa17.13■□□□□ 0.33
PAF1-201ENST00000221265 CFBP00751 764 aa17.13■□□□□ 0.33
PAF1-201ENST00000221265 ICAM1P05362 532 aa17.13■□□□□ 0.33
PAF1-201ENST00000221265 NF2P35240 595 aa17.13■□□□□ 0.33
PAF1-201ENST00000221265 NAT10Q9H0A0 1025 aaKnown RBP17.13■□□□□ 0.33
PAF1-201ENST00000221265 FAM13BQ9NYF5 915 aa17.13■□□□□ 0.33
PAF1-201ENST00000221265 FOXN1O15353 648 aa17.12■□□□□ 0.33
PAF1-201ENST00000221265 RRP9O43818 475 aaKnown RBP17.12■□□□□ 0.33
PAF1-201ENST00000221265 OR52Z1P0C646 297 aa17.12■□□□□ 0.33
PAF1-201ENST00000221265 DPCR1Q3MIW9 517 aa17.12■□□□□ 0.33
PAF1-201ENST00000221265 FCHSD1Q86WN1 690 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms