RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 USP17L17D6RBQ6 530 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 USP17L19D6RCP7 530 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 USP17L20D6RJB6 530 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 SSBP05455 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
USP11-201ENST00000218348 HLA-DOAP06340 250 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 SHMT1P34896 483 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 SARSP49591 514 aaKnown RBP11.22□□□□□ -0.61
USP11-201ENST00000218348 USP17L24Q0WX57 530 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 SEPT2Q15019 361 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 CCDC178Q5BJE1 867 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 E4F1Q66K89 784 aaPredicted RBP11.22□□□□□ -0.61
USP11-201ENST00000218348 USP17L6PQ6QN14 398 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 REXO1Q8N1G1 1221 aaKnown RBP11.22□□□□□ -0.61
USP11-201ENST00000218348 LRRC15Q8TF66 581 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 CCDC34Q96HJ3 373 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 C6orf50Q9HD87 102 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 TAB2Q9NYJ8 693 aa11.22□□□□□ -0.61
USP11-201ENST00000218348 ATRNL1Q5VV63 1379 aa11.21□□□□□ -0.61
USP11-201ENST00000218348 HDLBPQ00341 1268 aaKnown RBP11.21□□□□□ -0.61
USP11-201ENST00000218348 RAD51AP2Q09MP3 1159 aa11.21□□□□□ -0.61
USP11-201ENST00000218348 NONOQ15233 471 aaKnown RBP eCLIP11.21□□□□□ -0.61
USP11-201ENST00000218348 KANK3Q6NY19 840 aa11.21□□□□□ -0.61
USP11-201ENST00000218348 DYMQ7RTS9 669 aa11.21□□□□□ -0.61
USP11-201ENST00000218348 CCDC84Q86UT8 332 aaPredicted RBP11.21□□□□□ -0.61
USP11-201ENST00000218348 NIM1KQ8IY84 436 aa11.21□□□□□ -0.61
USP11-201ENST00000218348 ADGRF4Q8IZF3 695 aa11.21□□□□□ -0.61
USP11-201ENST00000218348 GPC2Q8N158 579 aa11.21□□□□□ -0.61
USP11-201ENST00000218348 CCAR2Q8N163 923 aaKnown RBP11.21□□□□□ -0.61
USP11-201ENST00000218348 PDCL2Q8N4E4 241 aa11.21□□□□□ -0.61
USP11-201ENST00000218348 PHIPQ8WWQ0 1821 aa11.21□□□□□ -0.61
USP11-201ENST00000218348 POLR2AP24928 1970 aaKnown RBP11.21□□□□□ -0.62
USP11-201ENST00000218348 POTEMA6NI47 508 aa11.21□□□□□ -0.62
USP11-201ENST00000218348 MTF1Q14872 753 aa11.21□□□□□ -0.62
USP11-201ENST00000218348 C4orf32Q8N8J7 132 aa11.21□□□□□ -0.62
USP11-201ENST00000218348 ZDHHC15Q96MV8 337 aa11.21□□□□□ -0.62
USP11-201ENST00000218348 POLD4Q9HCU8 107 aa11.21□□□□□ -0.62
USP11-201ENST00000218348 FEZ2Q9UHY8 353 aaPredicted RBP11.21□□□□□ -0.62
USP11-201ENST00000218348 CEP83Q9Y592 693 aa11.21□□□□□ -0.62
USP11-201ENST00000218348 SSC5DA1L4H1 1573 aa11.21□□□□□ -0.62
USP11-201ENST00000218348 NEMFO60524 1076 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 PLCG1P19174 1290 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 GYS2P54840 703 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 GSDMDP57764 484 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 DNAJC18Q9H819 358 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 SERPINA10Q9UK55 444 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 MYO3BQ8WXR4 1341 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 TTLL1O95922 423 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 EEF2P13639 858 aaKnown RBP11.2□□□□□ -0.62
USP11-201ENST00000218348 HHIPL2Q6UWX4 724 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 SLC30A10Q6XR72 485 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 CCDC112Q8NEF3 446 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 VEZTQ9HBM0 779 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 DACH1Q9UI36 760 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 CBFA2T2O43439 604 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 SLC37A4O43826 429 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 BMP15O95972 392 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 RPN1P04843 607 aaKnown RBP11.2□□□□□ -0.62
USP11-201ENST00000218348 RPS12P25398 132 aaKnown RBP11.2□□□□□ -0.62
USP11-201ENST00000218348 PRCPP42785 496 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 E2F4Q16254 413 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 CERKLQ49MI3 558 aaPredicted RBP11.2□□□□□ -0.62
USP11-201ENST00000218348 PDXDC2PQ6P474 469 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 CABP7Q86V35 215 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 VSTM4Q8IW00 320 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 CDAN1Q8IWY9 1227 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 NELFBQ8WX92 580 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 PRMT6Q96LA8 375 aaPredicted RBP11.2□□□□□ -0.62
USP11-201ENST00000218348 MYCBPQ99417 103 aaPredicted RBP11.2□□□□□ -0.62
USP11-201ENST00000218348 CNTNAP1P78357 1384 aa11.2□□□□□ -0.62
USP11-201ENST00000218348 PPP1R3GB7ZBB8 358 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 PPP1R11O60927 126 aaPredicted RBP11.19□□□□□ -0.62
USP11-201ENST00000218348 IDEP14735 1019 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 SLC1A4P43007 532 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 HIRAP54198 1017 aaPredicted RBP11.19□□□□□ -0.62
USP11-201ENST00000218348 RBM26Q5T8P6 1007 aaKnown RBP11.19□□□□□ -0.62
USP11-201ENST00000218348 MIGA2Q7L4E1 593 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 NEK8Q86SG6 692 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 ANKS1AQ92625 1134 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 JMJD4Q9H9V9 463 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 DISC1Q9NRI5 854 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 TCP11L1Q9NUJ3 509 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 RNF181Q9P0P0 153 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 ATAD5Q96QE3 1844 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 A0A0U1RQJ8 604 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 N4BP3O15049 544 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 GNA11P29992 359 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 PMS1P54277 932 aaKnown RBP11.19□□□□□ -0.62
USP11-201ENST00000218348 ASIC1P78348 528 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 NAALADL2Q58DX5 795 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 CIAPIN1Q6FI81 312 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 ENOX1Q8TC92 643 aaKnown RBP11.19□□□□□ -0.62
USP11-201ENST00000218348 ATRIPQ8WXE1 791 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 PPP1R13BQ96KQ4 1090 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 DNAI1Q9UI46 699 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 TULP2O00295 520 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 NRDCO43847 1150 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 OR52Z1P0C646 297 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 ADCY7P51828 1080 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 JAG1P78504 1218 aa11.19□□□□□ -0.62
USP11-201ENST00000218348 CACNB1Q02641 598 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms