RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 BAATQ14032 418 aaPredicted RBP31.27■■■□□ 2.6
CHMP4B-201ENST00000217402 MEIS2O14770 477 aa31.26■■■□□ 2.59
CHMP4B-201ENST00000217402 CTGFP29279 349 aa31.26■■■□□ 2.59
CHMP4B-201ENST00000217402 BLIDQ8IZY5 108 aa31.26■■■□□ 2.59
CHMP4B-201ENST00000217402 RASGRP4Q8TDF6 673 aa31.26■■■□□ 2.59
CHMP4B-201ENST00000217402 OXER1Q8TDS5 423 aa31.26■■■□□ 2.59
CHMP4B-201ENST00000217402 CYP39A1Q9NYL5 469 aa31.26■■■□□ 2.59
CHMP4B-201ENST00000217402 TNPO2O14787 897 aaKnown RBP31.25■■■□□ 2.59
CHMP4B-201ENST00000217402 DIS3L2Q8IYB7 885 aaKnown RBP31.25■■■□□ 2.59
CHMP4B-201ENST00000217402 REXO1Q8N1G1 1221 aaKnown RBP31.25■■■□□ 2.59
CHMP4B-201ENST00000217402 RGS22Q8NE09 1264 aa31.25■■■□□ 2.59
CHMP4B-201ENST00000217402 BICD2Q8TD16 824 aa31.25■■■□□ 2.59
CHMP4B-201ENST00000217402 GLT8D2Q9H1C3 349 aa31.25■■■□□ 2.59
CHMP4B-201ENST00000217402 BRMS1Q9HCU9 246 aa31.25■■■□□ 2.59
CHMP4B-201ENST00000217402 TMEM260Q9NX78 707 aa31.25■■■□□ 2.59
CHMP4B-201ENST00000217402 BIN2Q9UBW5 565 aaPredicted RBP31.25■■■□□ 2.59
CHMP4B-201ENST00000217402 PFASO15067 1338 aa31.25■■■□□ 2.59
CHMP4B-201ENST00000217402 ZSWIM8A7E2V4 1837 aa31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 KRT2P35908 639 aa31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 PSMC4P43686 418 aa31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 HSD17B4P51659 736 aa31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 FCGRTP55899 365 aa31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 SAFBQ15424 915 aaKnown RBP eCLIP31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 GALNT17Q6IS24 598 aa31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 DAGLBQ8NCG7 672 aa31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 ZNF296Q8WUU4 475 aaPredicted RBP31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 STX6O43752 255 aa31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 PGK2P07205 417 aa31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 KIF22Q14807 665 aa31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 JAKMIP3Q5VZ66 844 aa31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.24■■■□□ 2.594e-8■■■□□ 14.8
CHMP4B-201ENST00000217402 FCHSD1Q86WN1 690 aa31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 CD99L2Q8TCZ2 262 aa31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 TRIM47Q96LD4 638 aa31.24■■■□□ 2.59
CHMP4B-201ENST00000217402 PLXNB2O15031 1838 aa31.23■■■□□ 2.59
CHMP4B-201ENST00000217402 PIK3CDO00329 1044 aa31.23■■■□□ 2.59
CHMP4B-201ENST00000217402 FKTNO75072 461 aa31.23■■■□□ 2.59
CHMP4B-201ENST00000217402 PTPREP23469 700 aa31.23■■■□□ 2.59
CHMP4B-201ENST00000217402 GHRHRQ02643 423 aa31.23■■■□□ 2.59
CHMP4B-201ENST00000217402 MCTP1Q6DN14 999 aa31.23■■■□□ 2.59
CHMP4B-201ENST00000217402 SYTL5Q8TDW5 730 aaPredicted RBP31.23■■■□□ 2.59
CHMP4B-201ENST00000217402 PURBQ96QR8 312 aaKnown RBP31.23■■■□□ 2.59
CHMP4B-201ENST00000217402 COL20A1Q9P218 1284 aa31.23■■■□□ 2.59
CHMP4B-201ENST00000217402 BTBD18B2RXH4 712 aa31.22■■■□□ 2.59
CHMP4B-201ENST00000217402 STRNO43815 780 aa31.22■■■□□ 2.59
CHMP4B-201ENST00000217402 ADORA2AP29274 412 aa31.22■■■□□ 2.59
CHMP4B-201ENST00000217402 NR5A1Q13285 461 aa31.22■■■□□ 2.59
CHMP4B-201ENST00000217402 PGBD1Q96JS3 809 aa31.22■■■□□ 2.59
CHMP4B-201ENST00000217402 CAP1Q01518 475 aa31.21■■■□□ 2.59
CHMP4B-201ENST00000217402 GNL2Q13823 731 aaKnown RBP31.21■■■□□ 2.59
CHMP4B-201ENST00000217402 PKP1Q13835 747 aa31.21■■■□□ 2.59
CHMP4B-201ENST00000217402 GRB14Q14449 540 aa31.21■■■□□ 2.59
CHMP4B-201ENST00000217402 NOM1Q5C9Z4 860 aaKnown RBP31.21■■■□□ 2.59
CHMP4B-201ENST00000217402 PCDHA6Q9UN73 950 aa31.21■■■□□ 2.59
CHMP4B-201ENST00000217402 PCDHA8Q9Y5H6 950 aa31.21■■■□□ 2.59
CHMP4B-201ENST00000217402 CLK2P49760 499 aaKnown RBP31.2■■■□□ 2.59
CHMP4B-201ENST00000217402 ABRAQ8N0Z2 381 aa31.2■■■□□ 2.59
CHMP4B-201ENST00000217402 MAP3K20Q9NYL2 800 aaKnown RBP31.2■■■□□ 2.59
CHMP4B-201ENST00000217402 MTMR6Q9Y217 621 aa31.2■■■□□ 2.59
CHMP4B-201ENST00000217402 SLC15A5A6NIM6 579 aa31.2■■■□□ 2.58
CHMP4B-201ENST00000217402 POTEB2H3BUK9 544 aa31.2■■■□□ 2.58
CHMP4B-201ENST00000217402 CNTN2Q02246 1040 aa31.2■■■□□ 2.58
CHMP4B-201ENST00000217402 SAMD3Q8N6K7 520 aa31.2■■■□□ 2.58
CHMP4B-201ENST00000217402 MGAMO43451 1857 aa31.19■■■□□ 2.58
CHMP4B-201ENST00000217402 SPDYE3A6NKU9 549 aa31.19■■■□□ 2.58
CHMP4B-201ENST00000217402 KIF28PB7ZC32 967 aa31.19■■■□□ 2.58
CHMP4B-201ENST00000217402 M0R2N6 131 aa31.19■■■□□ 2.58
CHMP4B-201ENST00000217402 FOXD4L5Q5VV16 416 aaPredicted RBP31.19■■■□□ 2.58
CHMP4B-201ENST00000217402 FOXD4L4Q8WXT5 416 aaPredicted RBP31.19■■■□□ 2.58
CHMP4B-201ENST00000217402 ERO1AQ96HE7 468 aa31.19■■■□□ 2.58
CHMP4B-201ENST00000217402 FERMT3Q86UX7 667 aa31.18■■■□□ 2.58
CHMP4B-201ENST00000217402 TAAR1Q96RJ0 339 aa31.18■■■□□ 2.58
CHMP4B-201ENST00000217402 MAF1Q9H063 256 aa31.18■■■□□ 2.58
CHMP4B-201ENST00000217402 DNAJC25-GNG10A0A024R161 153 aa31.17■■■□□ 2.58
CHMP4B-201ENST00000217402 HSPA1AP0DMV8 641 aaKnown RBP31.17■■■□□ 2.58
CHMP4B-201ENST00000217402 HSPA1BP0DMV9 641 aaKnown RBP31.17■■■□□ 2.58
CHMP4B-201ENST00000217402 DDIT3P35638 169 aa31.17■■■□□ 2.58
CHMP4B-201ENST00000217402 AP3B2Q13367 1082 aa31.17■■■□□ 2.58
CHMP4B-201ENST00000217402 MORN1Q5T089 497 aa31.17■■■□□ 2.58
CHMP4B-201ENST00000217402 TEX2Q8IWB9 1127 aa31.17■■■□□ 2.58
CHMP4B-201ENST00000217402 ANO3Q9BYT9 981 aa31.17■■■□□ 2.58
CHMP4B-201ENST00000217402 FOXN1O15353 648 aa31.16■■■□□ 2.58
CHMP4B-201ENST00000217402 COBLO75128 1261 aa31.16■■■□□ 2.58
CHMP4B-201ENST00000217402 DPP9Q86TI2 863 aa31.16■■■□□ 2.58
CHMP4B-201ENST00000217402 FAM133AQ8N9E0 248 aa31.16■■■□□ 2.58
CHMP4B-201ENST00000217402 TNFRSF25Q93038 417 aa31.16■■■□□ 2.58
CHMP4B-201ENST00000217402 NUDT12Q9BQG2 462 aa31.16■■■□□ 2.58
CHMP4B-201ENST00000217402 FOXP1Q9H334 677 aaPredicted RBP31.16■■■□□ 2.58
CHMP4B-201ENST00000217402 CCDC194A0A1B0GVG4 234 aa31.16■■■□□ 2.58
CHMP4B-201ENST00000217402 PIK3AP1Q6ZUJ8 805 aa31.16■■■□□ 2.58
CHMP4B-201ENST00000217402 SOCS4Q8WXH5 440 aa31.16■■■□□ 2.58
CHMP4B-201ENST00000217402 RMDN3Q96TC7 470 aa31.16■■■□□ 2.58
CHMP4B-201ENST00000217402 LCTP09848 1927 aa31.15■■■□□ 2.58
CHMP4B-201ENST00000217402 ZNF236Q9UL36 1845 aa31.15■■■□□ 2.58
CHMP4B-201ENST00000217402 FAM205CA6NFA0 338 aa31.15■■■□□ 2.58
CHMP4B-201ENST00000217402 FOSP01100 380 aaPredicted RBP31.15■■■□□ 2.58
CHMP4B-201ENST00000217402 UBXN2AP68543 259 aa31.15■■■□□ 2.58
CHMP4B-201ENST00000217402 MAP2K5Q13163 448 aa31.15■■■□□ 2.58
CHMP4B-201ENST00000217402 EARS2Q5JPH6 523 aaKnown RBP31.15■■■□□ 2.58
CHMP4B-201ENST00000217402 KRT25Q7Z3Z0 450 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms