RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 LCORLQ8N3X6 602 aa14.9□□□□□ -0.02
TGFBR3-201ENST00000212355 USP21Q9UK80 565 aa14.9□□□□□ -0.02
TGFBR3-201ENST00000212355 SERPINB6P35237 376 aa14.9□□□□□ -0.02
TGFBR3-201ENST00000212355 TUBGCP2Q9BSJ2 902 aa14.9□□□□□ -0.02
TGFBR3-201ENST00000212355 ATP8A1Q9Y2Q0 1164 aa14.9□□□□□ -0.02
TGFBR3-201ENST00000212355 HMGB2P26583 209 aaKnown RBP14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 MYL7Q01449 175 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 USP17L2Q6R6M4 530 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 MIGA2Q7L4E1 593 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 FBXO11Q86XK2 927 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 NIM1KQ8IY84 436 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 PCDHB4Q9Y5E5 795 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 BICRAQ9NZM4 1560 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 ATF2P15336 505 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 RPS6KA2Q15349 733 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 WHAMMP3Q1A5X7 153 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 RFX6Q8HWS3 928 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 H7C0C1 242 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 GFPT2O94808 682 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 USP17L8P0C7I0 530 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 POLR2MP0CAP2 368 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 SSTR3P32745 418 aaPredicted RBP14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 ATP5OP48047 213 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 GABPB1Q06547 395 aaPredicted RBP14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 USP17L3A6NCW0 530 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 USP17L4A6NCW7 530 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 GOLGA8SH3BPF8 625 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 MTMR3Q13615 1198 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 USP17L1Q7RTZ2 530 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 GOLGA8IPA6NC78 632 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 GOLGA8JA6NMD2 632 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 POLGP54098 1239 aaPredicted RBP14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 YWHAGP61981 247 aaKnown RBP eCLIP14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 CCDC125Q86Z20 511 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 ZBTB38Q8NAP3 1195 aaPredicted RBP14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 KIAA0556O60303 1618 aa14.89□□□□□ -0.03
TGFBR3-201ENST00000212355 SRGAP2O75044 1071 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 IRX4P78413 519 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 ERFEQ4G0M1 354 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 SCARA5Q6ZMJ2 495 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 CPVLQ9H3G5 476 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 CCPG1Q9ULG6 757 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 SNAP23O00161 211 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 TMED2Q15363 201 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 CCDC84Q86UT8 332 aaPredicted RBP14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 PIGSQ96S52 555 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 PCDHB6Q9Y5E3 794 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 CD2APQ9Y5K6 639 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 TUBBP07437 444 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 GSTA1P08263 222 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 GSTA2P09210 222 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 HOXA13P31271 388 aaPredicted RBP14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 ARHGAP25P42331 645 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 ICA1Q05084 483 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 SPATA1Q5VX52 437 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 C1orf112Q9NSG2 853 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 CYP27A1Q02318 531 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 EXOC3L4Q17RC7 722 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 ODR4Q5SWX8 454 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 CFAP61Q8NHU2 1237 aa14.88□□□□□ -0.03
TGFBR3-201ENST00000212355 MX2P20592 715 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 PLTPP55058 493 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 PCDHA1Q9Y5I3 950 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 WDR62O43379 1518 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 RGS12O14924 1447 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 ATP1A3P13637 1013 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 TUBB2AQ13885 445 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 CCDC38Q502W7 563 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 NSUN7Q8NE18 718 aaKnown RBP14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 CFAP36Q96G28 342 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 TUBB2BQ9BVA1 445 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 NT5C3AQ9H0P0 336 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 SUDS3Q9H7L9 328 aaPredicted RBP14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 PTPRTO14522 1441 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 EFCAB8A8MWE9 144 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 RNF40O75150 1001 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 PDE6BP35913 854 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 RAPH1Q70E73 1250 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 ANKRD35Q8N283 1001 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 PLEKHF1Q96S99 279 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 EPC1Q9H2F5 836 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 KLHL14Q9P2G3 628 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 KDM3AQ9Y4C1 1321 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 GTPBP6O43824 516 aaPredicted RBP14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 DDIT3P35638 169 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 BFSP1Q12934 665 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 MAST3O60307 1309 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 GOLGA8KD6RF30 607 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 TROVE2P10155 538 aaKnown RBP eCLIP14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 MARK3P27448 753 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 DMP1Q13316 513 aaPredicted RBP14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 SLFN13Q68D06 897 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 PI4K2BQ8TCG2 481 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 NSMCE1Q8WV22 266 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 RABGAP1Q9Y3P9 1069 aa14.87□□□□□ -0.03
TGFBR3-201ENST00000212355 CD58P19256 250 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 HDLBPQ00341 1268 aaKnown RBP14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 ARHGEF10O15013 1369 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 GCKP35557 465 aa14.86□□□□□ -0.03
TGFBR3-201ENST00000212355 LZTS2Q9BRK4 669 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms