RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 EPB41L5Q9HCM4 733 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 ZBTB12Q9Y330 459 aaPredicted RBP12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 EPHB4P54760 987 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 ATP11AP98196 1134 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 KLHL30Q0D2K2 578 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 TNIP1Q15025 636 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 DCAF17Q5H9S7 520 aaPredicted RBP12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 CNNM4Q6P4Q7 775 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 RBM28Q9NW13 759 aaKnown RBP12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 B4DLN1 442 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 KCNK3O14649 394 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 TNNI2P48788 182 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 MUM1L1Q5H9M0 696 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 UTP11Q9Y3A2 253 aaKnown RBP12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 M0R2C6 588 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 FOXN1O15353 648 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 SETDB1Q15047 1291 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 INTS8Q75QN2 995 aaKnown RBP12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 HOOK3Q86VS8 718 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 TCP11Q8WWU5 503 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 CAMKK2Q96RR4 588 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 CCDC77Q9BR77 488 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 FAM184BQ9ULE4 1060 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 HEXIM1O94992 359 aaKnown RBP12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 CDC25AP30304 524 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 KCNJ6P48051 423 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 CACNB3P54284 484 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 PTPN12Q05209 780 aaKnown RBP12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 CALCOCO2Q13137 446 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 LRRN4CLQ8ND94 238 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 RIN2Q8WYP3 895 aaPredicted RBP12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 EPSTI1Q96J88 318 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 NCAPGQ9BPX3 1015 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 C6orf50Q9HD87 102 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 CEP83Q9Y592 693 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 PCDHB6Q9Y5E3 794 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 TBCAO75347 108 aaKnown RBP12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 PARP1P09874 1014 aaKnown RBP12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 TXKP42681 527 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 RASSF7Q02833 373 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 DDR1Q08345 913 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 UHMK1Q8TAS1 419 aaKnown RBP12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 TBC1D5Q92609 795 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 KRT12Q99456 494 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 TUBGCP2Q9BSJ2 902 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 ISCA1Q9BUE6 129 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 GTPBP6O43824 516 aaPredicted RBP12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 N4BP1O75113 896 aaKnown RBP12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 RPN1P04843 607 aaKnown RBP12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 PPP1R2P41236 205 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 EHHADHQ08426 723 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 VSIG1Q86XK7 387 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 MGARPQ8TDB4 240 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 TEKT1Q969V4 418 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 USP40Q9NVE5 1235 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 HDAC6Q9UBN7 1215 aa12.73□□□□□ -0.37
DNMT3B-201ENST00000201963 CHGBP05060 677 aa12.72□□□□□ -0.37
DNMT3B-201ENST00000201963 SYCP3Q8IZU3 236 aa12.72□□□□□ -0.37
DNMT3B-201ENST00000201963 SPATA5Q8NB90 893 aa12.72□□□□□ -0.37
DNMT3B-201ENST00000201963 DPH5Q9H2P9 285 aa12.72□□□□□ -0.37
DNMT3B-201ENST00000201963 MINPP1Q9UNW1 487 aa12.72□□□□□ -0.37
DNMT3B-201ENST00000201963 H7C1W4 665 aa12.72□□□□□ -0.37
DNMT3B-201ENST00000201963 SLC8A1P32418 973 aa12.72□□□□□ -0.37
DNMT3B-201ENST00000201963 KRT31Q15323 416 aa12.72□□□□□ -0.37
DNMT3B-201ENST00000201963 PNPLA7Q6ZV29 1317 aa12.72□□□□□ -0.37
DNMT3B-201ENST00000201963 DIXDC1Q155Q3 683 aa12.72□□□□□ -0.37
DNMT3B-201ENST00000201963 C9orf131Q5VYM1 1079 aa12.72□□□□□ -0.37
DNMT3B-201ENST00000201963 PEX26Q7Z412 305 aa12.72□□□□□ -0.37
DNMT3B-201ENST00000201963 PLVAPQ9BX97 442 aa12.72□□□□□ -0.37
DNMT3B-201ENST00000201963 CEMIPQ8WUJ3 1361 aa12.72□□□□□ -0.37
DNMT3B-201ENST00000201963 ACTN4O43707 911 aaKnown RBP12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 PDE6AP16499 860 aa12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 PRPHP41219 470 aa12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 ASIC2Q16515 512 aa12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 MRPL44Q9H9J2 332 aaKnown RBP12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 NKIRAS1Q9NYS0 192 aa12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 SERPINA10Q9UK55 444 aa12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 GPSM2P81274 684 aa12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 C6orf163Q5TEZ5 329 aa12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 SFMBT2Q5VUG0 894 aa12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 FBXW10Q5XX13 1052 aa12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 IFNL3Q8IZI9 196 aa12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 TGFBRAP1Q8WUH2 860 aa12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 POLD4Q9HCU8 107 aa12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 LRWD1Q9UFC0 647 aa12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 UBN2Q6ZU65 1347 aa12.71□□□□□ -0.37
DNMT3B-201ENST00000201963 NR1D1P20393 614 aa12.71□□□□□ -0.38
DNMT3B-201ENST00000201963 ACTN3Q08043 901 aaPredicted RBP12.71□□□□□ -0.38
DNMT3B-201ENST00000201963 MTMR3Q13615 1198 aa12.71□□□□□ -0.38
DNMT3B-201ENST00000201963 PLS1Q14651 629 aa12.71□□□□□ -0.38
DNMT3B-201ENST00000201963 RESP18Q5W5W9 173 aa12.71□□□□□ -0.38
DNMT3B-201ENST00000201963 CC2D2BQ6DHV5 1058 aa12.71□□□□□ -0.38
DNMT3B-201ENST00000201963 STOX1Q6ZVD7 989 aa12.71□□□□□ -0.38
DNMT3B-201ENST00000201963 LMNTD2Q8IXW0 634 aa12.71□□□□□ -0.38
DNMT3B-201ENST00000201963 PROM2Q8N271 834 aa12.71□□□□□ -0.38
DNMT3B-201ENST00000201963 TRIM7Q9C029 511 aa12.71□□□□□ -0.38
DNMT3B-201ENST00000201963 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.71□□□□□ -0.383e-6■■■■■ 32.6
DNMT3B-201ENST00000201963 TBC1D7Q9P0N9 293 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms