RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 CAPN11Q9UMQ6 739 aa19.01■□□□□ 0.63
PTPN18-201ENST00000175756 HYOU1Q9Y4L1 999 aa19.01■□□□□ 0.63
PTPN18-201ENST00000175756 GFPT1Q06210 699 aaPredicted RBP19■□□□□ 0.63
PTPN18-201ENST00000175756 CALCRLQ16602 461 aa19■□□□□ 0.63
PTPN18-201ENST00000175756 NFU1Q9UMS0 254 aa19■□□□□ 0.63
PTPN18-201ENST00000175756 LOC102724428A0A0B4J2F2 783 aa19■□□□□ 0.63
PTPN18-201ENST00000175756 SIK1P57059 783 aa19■□□□□ 0.63
PTPN18-201ENST00000175756 HERVK_113P62684 666 aa19■□□□□ 0.63
PTPN18-201ENST00000175756 TBCKQ8TEA7 893 aa19■□□□□ 0.63
PTPN18-201ENST00000175756 HDAC7Q8WUI4 952 aa19■□□□□ 0.63
PTPN18-201ENST00000175756 JRKLQ9Y4A0 524 aa19■□□□□ 0.63
PTPN18-201ENST00000175756 TUBGCP6Q96RT7 1819 aa19■□□□□ 0.63
PTPN18-201ENST00000175756 CEP104O60308 925 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 KLRK1P26718 216 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 DCAF17Q5H9S7 520 aaPredicted RBP18.99■□□□□ 0.63
PTPN18-201ENST00000175756 THAP9Q9H5L6 903 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 ZNF287Q9HBT7 754 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 DMGDHQ9UI17 866 aaKnown RBP18.99■□□□□ 0.63
PTPN18-201ENST00000175756 RAB21Q9UL25 225 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 CAPN7Q9Y6W3 813 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 RIC1Q4ADV7 1423 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 CFAP221Q4G0U5 840 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 HERC4Q5GLZ8 1057 aaPredicted RBP18.99■□□□□ 0.63
PTPN18-201ENST00000175756 PDXDC2PQ6P474 469 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 REXO1Q8N1G1 1221 aaKnown RBP18.99■□□□□ 0.63
PTPN18-201ENST00000175756 CCDC155Q8N6L0 562 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 NDST4Q9H3R1 872 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 ITIH6Q6UXX5 1313 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 FAM205AQ6ZU69 1335 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 CNTNAP5Q8WYK1 1306 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 TLDC2A0PJX2 215 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 ERVV-1B6SEH8 477 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 SLC9C1Q4G0N8 1177 aa18.99■□□□□ 0.63
PTPN18-201ENST00000175756 ELOA2Q8IYF1 753 aaPredicted RBP18.99■□□□□ 0.63
PTPN18-201ENST00000175756 UBLCP1Q8WVY7 318 aaPredicted RBP18.99■□□□□ 0.63
PTPN18-201ENST00000175756 DHTKD1Q96HY7 919 aaPredicted RBP18.99■□□□□ 0.63
PTPN18-201ENST00000175756 GOLGA6L7A0A1B0GV03 622 aa18.98■□□□□ 0.63
PTPN18-201ENST00000175756 MAGEA9P43362 315 aa18.98■□□□□ 0.63
PTPN18-201ENST00000175756 KIAA0753Q2KHM9 967 aa18.98■□□□□ 0.63
PTPN18-201ENST00000175756 COA7Q96BR5 231 aa18.98■□□□□ 0.63
PTPN18-201ENST00000175756 FAM84BQ96KN1 310 aaPredicted RBP18.98■□□□□ 0.63
PTPN18-201ENST00000175756 MTRQ99707 1265 aa18.98■□□□□ 0.63
PTPN18-201ENST00000175756 FAM184BQ9ULE4 1060 aa18.98■□□□□ 0.63
PTPN18-201ENST00000175756 LRRC53A6NM62 1247 aa18.98■□□□□ 0.63
PTPN18-201ENST00000175756 ADAMTS3O15072 1205 aa18.98■□□□□ 0.63
PTPN18-201ENST00000175756 ARL6IP4Q66PJ3 421 aaKnown RBP18.98■□□□□ 0.63
PTPN18-201ENST00000175756 ADAT2Q7Z6V5 191 aaKnown RBP18.98■□□□□ 0.63
PTPN18-201ENST00000175756 NEK8Q86SG6 692 aa18.98■□□□□ 0.63
PTPN18-201ENST00000175756 CCDC84Q86UT8 332 aaPredicted RBP18.98■□□□□ 0.63
PTPN18-201ENST00000175756 IFT20Q8IY31 132 aa18.98■□□□□ 0.63
PTPN18-201ENST00000175756 LSM14BQ9BX40 385 aaKnown RBP18.98■□□□□ 0.63
PTPN18-201ENST00000175756 ARPP21Q9UBL0 812 aaPredicted RBP18.98■□□□□ 0.63
PTPN18-201ENST00000175756 HEXIM1O94992 359 aaKnown RBP18.98■□□□□ 0.63
PTPN18-201ENST00000175756 KLHL30Q0D2K2 578 aa18.98■□□□□ 0.63
PTPN18-201ENST00000175756 CEP85LQ5SZL2 805 aa18.98■□□□□ 0.63
PTPN18-201ENST00000175756 CCNI2Q6ZMN8 369 aaPredicted RBP18.98■□□□□ 0.63
PTPN18-201ENST00000175756 TRAPPC11Q7Z392 1133 aa18.98■□□□□ 0.63
PTPN18-201ENST00000175756 SLC4A9Q96Q91 983 aa18.98■□□□□ 0.63
PTPN18-201ENST00000175756 RCCD1A6NED2 376 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 C6orf229H3BNL8 230 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 MYBL2P10244 700 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 UBE4AQ14139 1066 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 TEX11Q8IYF3 940 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 SPATA4Q8NEY3 305 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 MINPP1Q9UNW1 487 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 KDM3BQ7LBC6 1761 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 POTEMA6NI47 508 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 KCNK3O14649 394 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 TCP1P17987 556 aaKnown RBP18.97■□□□□ 0.63
PTPN18-201ENST00000175756 IL17AQ16552 155 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 APTXQ7Z2E3 356 aaKnown RBP18.97■□□□□ 0.63
PTPN18-201ENST00000175756 SH3RF1Q7Z6J0 888 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 ZSCAN29Q8IWY8 852 aaPredicted RBP18.97■□□□□ 0.63
PTPN18-201ENST00000175756 TMEM260Q9NX78 707 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 CAPN6Q9Y6Q1 641 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 PDE2AO00408 941 aaPredicted RBP18.97■□□□□ 0.63
PTPN18-201ENST00000175756 USP8P40818 1118 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 IRX3P78415 501 aaPredicted RBP18.97■□□□□ 0.63
PTPN18-201ENST00000175756 KRT25Q7Z3Z0 450 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 ZNF34Q8IZ26 560 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 LRRC47Q8N1G4 583 aaKnown RBP18.97■□□□□ 0.63
PTPN18-201ENST00000175756 PIGSQ96S52 555 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 EYA3Q99504 573 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 BRIP1Q9BX63 1249 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 PSD3Q9NYI0 1048 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 ADAMTS1Q9UHI8 967 aa18.97■□□□□ 0.63
PTPN18-201ENST00000175756 REXO2Q9Y3B8 237 aaKnown RBP18.97■□□□□ 0.63
PTPN18-201ENST00000175756 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.97■□□□□ 0.63
PTPN18-201ENST00000175756 E7EVH7 732 aa18.96■□□□□ 0.63
PTPN18-201ENST00000175756 KRT14P02533 472 aa18.96■□□□□ 0.63
PTPN18-201ENST00000175756 SFMBT2Q5VUG0 894 aa18.96■□□□□ 0.63
PTPN18-201ENST00000175756 CCDC170Q8IYT3 715 aa18.96■□□□□ 0.63
PTPN18-201ENST00000175756 TBC1D5Q92609 795 aa18.96■□□□□ 0.63
PTPN18-201ENST00000175756 GJA10Q969M2 543 aa18.96■□□□□ 0.63
PTPN18-201ENST00000175756 FAM169AQ9Y6X4 670 aa18.96■□□□□ 0.63
PTPN18-201ENST00000175756 TNS3Q68CZ2 1445 aa18.96■□□□□ 0.63
PTPN18-201ENST00000175756 MED1Q15648 1581 aaPredicted RBP18.96■□□□□ 0.63
PTPN18-201ENST00000175756 SPATA20Q8TB22 786 aa18.96■□□□□ 0.63
PTPN18-201ENST00000175756 ATP8A2Q9NTI2 1148 aa18.96■□□□□ 0.63
PTPN18-201ENST00000175756 NNTQ13423 1086 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms