RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Meis2P97367 477 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Igf2bp2Q5SF07 592 aaKnown RBP12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 TfrcQ62351 763 aaKnown RBP12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Brd2Q7JJ13 798 aaKnown RBP12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Gprasp2Q8BUY8 826 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Zhx2Q8C0C0 836 aaKnown RBP12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Mettl5Q8K1A0 209 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Fbxo18Q8K2I9 1042 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 E2f4Q8R0K9 410 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 4930548H24RikQ9D496 437 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Stk32bQ9JJX8 414 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Scn3aA2ASI5 1947 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Krt78E9Q0F0 1068 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Parp1P11103 1013 aaKnown RBP12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Rasa2P58069 847 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Kcnj11Q61743 390 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 RragbQ6NTA4 374 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 GypcQ78HU7 95 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Nap1l4Q78ZA7 375 aaKnown RBP12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Ccz1Q8C1Y8 480 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Ifi35Q9D8C4 286 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Baiap2l1Q9DBJ3 514 aa12.14□□□□□ -0.47
Lig3-212ENSMUST00000173727 Akr1c19G3X9Y6 323 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Ccna1Q61456 421 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Ano10Q8BH79 659 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Spata21Q8BHW6 681 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Cabp7Q91ZM8 215 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 SisF8VQM5 1818 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Polr2aP08775 1970 aaKnown RBP12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Dock2Q8C3J5 1828 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Rnf216P58283 853 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Pls1Q3V0K9 630 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 CtifQ6PEE2 600 aaKnown RBP12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Bhmt2Q91WS4 363 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Dnajc19Q9CQV7 116 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Sertad1Q9JL10 236 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Pdcd6ipQ9WU78 869 aaKnown RBP12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Ankrd35E9Q9D8 996 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Tpm3P21107 285 aaKnown RBP12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Hoxa13Q62424 386 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Bbs9Q811G0 885 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Fermt2Q8CIB5 680 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Trub2Q91WG3 331 aaKnown RBP12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 BaatQ91X34 420 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Syt10Q9R0N4 523 aa12.13□□□□□ -0.47
Lig3-212ENSMUST00000173727 Rsph10bE9PYQ0 876 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 FosP01101 380 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Frat1P70339 274 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Caps2Q8BUG5 550 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Filip1Q9CS72 1211 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Ddx20Q9JJY4 825 aaKnown RBP12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Dctpp1Q9QY93 170 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Mkrn3Q60764 544 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Ercc6lQ8BHK9 1240 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Havcr2Q8VIM0 281 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Atp5c1Q91VR2 298 aaKnown RBP12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 CenpqQ9CPQ5 267 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Tjp3Q9QXY1 905 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Grin2dQ03391 1323 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 C87977A2A958 498 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Cdc25aP48964 514 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Xxylt1Q3U4G3 392 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Aldh1b1Q9CZS1 519 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Saal1Q9D2C2 474 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Cmtm5Q9D6G9 156 aa12.12□□□□□ -0.47
Lig3-212ENSMUST00000173727 Has3O08650 554 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Dnajb6O54946 365 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Prkg1P0C605 671 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Sv2cQ69ZS6 727 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Cep135Q6P5D4 1140 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Garem2Q6PAJ3 880 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Dcaf8Q8N7N5 591 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Nr3c2Q8VII8 978 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Anapc4Q91W96 807 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Q91WD4 421 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Arhgef25Q9CWR0 618 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 CluhQ5SW19 1315 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Gm5624F6ZZG8 207 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 MycnP03966 462 aaKnown RBP12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Usp14Q9JMA1 493 aaKnown RBP12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Fxr2Q9WVR4 673 aaKnown RBP12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Cdc27A2A6Q5 825 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Vmn2r71L7N2D8 855 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 AoahO35298 574 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Nbr1P97432 988 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Siah1bQ06985 282 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Tfcp2l1Q3UNW5 479 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Rgl1Q60695 768 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 RbsnQ80Y56 783 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Zdhhc14Q8BQQ1 489 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Arhgef19Q8BWA8 802 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Washc1Q8VDD8 475 aa12.11□□□□□ -0.47
Lig3-212ENSMUST00000173727 Ccdc88cQ6VGS5 2009 aa12.1□□□□□ -0.47
Lig3-212ENSMUST00000173727 Flot1O08917 428 aa12.1□□□□□ -0.47
Lig3-212ENSMUST00000173727 ThbdP15306 577 aa12.1□□□□□ -0.47
Lig3-212ENSMUST00000173727 Pcif1P59114 706 aa12.1□□□□□ -0.47
Lig3-212ENSMUST00000173727 Usp13Q5BKP2 858 aa12.1□□□□□ -0.47
Lig3-212ENSMUST00000173727 Ccdc148Q6P5U8 527 aa12.1□□□□□ -0.47
Lig3-212ENSMUST00000173727 Ccdc122Q8BVN0 290 aa12.1□□□□□ -0.47
Lig3-212ENSMUST00000173727 Kbtbd4Q8R179 534 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms