RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Cntnap2Q9CPW0 1332 aa9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 Lrrc37aB1AWG4 3215 aa9.48□□□□□ -0.89
Trim40-203ENSMUST00000172711 Cd3dP04235 173 aa9.48□□□□□ -0.89
Trim40-203ENSMUST00000172711 FpgsP48760 587 aa9.48□□□□□ -0.89
Trim40-203ENSMUST00000172711 Trappc3lQ4KL14 181 aa9.48□□□□□ -0.89
Trim40-203ENSMUST00000172711 ScapQ6GQT6 1276 aa9.48□□□□□ -0.89
Trim40-203ENSMUST00000172711 Peg10Q7TN75 958 aaKnown RBP9.48□□□□□ -0.89
Trim40-203ENSMUST00000172711 Prune1Q8BIW1 454 aa9.48□□□□□ -0.89
Trim40-203ENSMUST00000172711 TraipQ8VIG6 470 aa9.48□□□□□ -0.89
Trim40-203ENSMUST00000172711 Snx29Q9D3S3 818 aa9.48□□□□□ -0.89
Trim40-203ENSMUST00000172711 PolkQ9QUG2 852 aa9.48□□□□□ -0.89
Trim40-203ENSMUST00000172711 Mbtps1Q9WTZ2 1052 aa9.48□□□□□ -0.89
Trim40-203ENSMUST00000172711 Ttc6G3UYY4 1857 aa9.48□□□□□ -0.89
Trim40-203ENSMUST00000172711 Rev3lQ61493 3122 aa9.48□□□□□ -0.89
Trim40-203ENSMUST00000172711 Cops5O35864 334 aa9.47□□□□□ -0.89
Trim40-203ENSMUST00000172711 Siah1bQ06985 282 aa9.47□□□□□ -0.89
Trim40-203ENSMUST00000172711 Znf800Q0VEE6 662 aa9.47□□□□□ -0.89
Trim40-203ENSMUST00000172711 Entpd7Q3TCT4 606 aa9.47□□□□□ -0.89
Trim40-203ENSMUST00000172711 1700001K19RikQ80ZT1 219 aa9.47□□□□□ -0.89
Trim40-203ENSMUST00000172711 Pgm5Q8BZF8 567 aa9.47□□□□□ -0.89
Trim40-203ENSMUST00000172711 RydenQ8CAK3 290 aaKnown RBP9.47□□□□□ -0.89
Trim40-203ENSMUST00000172711 MafaQ8CF90 359 aa9.47□□□□□ -0.89
Trim40-203ENSMUST00000172711 Slc12a8Q8VI23 705 aa9.47□□□□□ -0.89
Trim40-203ENSMUST00000172711 AW822073A0A0N4SUK1 652 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Otud7bB2RUR8 840 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Dnaaf5B9EJR8 853 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 PuraP42669 321 aaKnown RBP9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 RabggtbP53612 339 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Rps6P62754 249 aaKnown RBP9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Grxcr1Q50H32 290 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Cnga2Q62398 664 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Pip5kl1Q6U7H8 395 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Moxd2Q7TT41 619 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 DlatQ8BMF4 642 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 QarsQ8BML9 775 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Gpcpd1Q8C0L9 675 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Dis3lQ8C0S1 1053 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Ppfibp1Q8C8U0 969 aaKnown RBP9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Ttc9bQ9D6E4 239 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Mad2l2Q9D752 211 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Sil1Q9EPK6 465 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Foxe3Q9QY14 288 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Atp1a4Q9WV27 1032 aa9.46□□□□□ -0.89
Trim40-203ENSMUST00000172711 Cep295Q8BQ48 2412 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 Dmrta2A2A9A2 531 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 Gm4788E9Q8B5 879 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 EomesO54839 707 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 EnamO55196 1274 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 Stra6O70491 670 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 Stx8O88983 236 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 Kif20aP97329 887 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 DmwdQ08274 665 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 Esyt1Q3U7R1 1092 aaKnown RBP9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 Ptger2Q62053 362 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 Ece2Q80Z60 881 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 ClmnQ8C5W0 1052 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 Adam1bQ8R534 806 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 Me2Q99KE1 589 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 Erc1Q99MI1 1120 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 Tomm70Q9CZW5 611 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 PrelpQ9JK53 378 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 Mnx1Q9QZW9 404 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 ArntlQ9WTL8 632 aa9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 Gys1Q9Z1E4 738 aaKnown RBP9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 IkQ9Z1M8 557 aaKnown RBP9.46□□□□□ -0.9
Trim40-203ENSMUST00000172711 AspmQ8CJ27 3122 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Vps13aQ5H8C4 3166 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Gm30191A0A0U1RNT7 187 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Jakmip2D3YXK0 820 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 AunipE9Q6Z5 340 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Mt-CybP00158 381 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Aldh1a1P24549 501 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Hoxa11P31311 313 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Syt2P46097 422 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 GaaP70699 953 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 A1cfQ5YD48 595 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Elf1Q60775 612 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Ppp2r5bQ6PD28 497 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Zbed4Q80WQ9 1168 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 LppQ8BFW7 613 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Fbxl21Q8BFZ4 434 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Htatsf1Q8BGC0 757 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Aldh5a1Q8BWF0 523 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Map1sQ8C052 973 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 MutyhQ99P21 515 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Ggps1Q9WTN0 300 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Malrd1A2AJX4 2123 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 Trip11E9Q512 1976 aa9.45□□□□□ -0.9
Trim40-203ENSMUST00000172711 TriobpQ99KW3 2014 aa9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 Robo3Q9Z2I4 1366 aa9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 Upf2A2AT37 1269 aaKnown RBP9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 DgkkE9Q7N4 1118 aa9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 LipiF6YQT7 476 aa9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 Lilrb3P97484 841 aa9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 Sap130Q8BIH0 1057 aa9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 Tcp11l1Q8BTG3 509 aa9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 NkrfQ8BY02 690 aaKnown RBP9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 Epha10Q8BYG9 1007 aa9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 Depdc1aQ8CIG0 804 aa9.44□□□□□ -0.9
Trim40-203ENSMUST00000172711 Plcg2Q8CIH5 1265 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms