RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ccdc38Q8CDN8 563 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Tmx1Q8VBT0 278 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Sfi1Q3UZY0 1216 aaKnown RBP17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Txndc16Q7TN22 820 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Vgll2Q8BGW8 322 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Trim9Q8C7M3 817 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Mfap3Q922T2 349 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Ppp1r3gQ9CW07 347 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Glt1d1A4FUP9 346 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Gm4307E9PZY4 289 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Gm4312K9J7E2 289 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Myo1aO88329 1043 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Pak1O88643 545 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Pbx1P41778 430 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Kcnb1Q03717 857 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Atp13a3Q5XF89 1219 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Senp6Q6P7W0 1132 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Peg10Q7TN75 958 aaKnown RBP17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Lmbrd1Q8K0B2 537 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Dppa3Q8QZY3 150 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Snapc2Q91XA5 359 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Mettl16Q9CQG2 553 aaKnown RBP17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Mss51Q9D5Z5 446 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Itga2bQ9QUM0 1033 aa17.8■□□□□ 0.44
Trim39-203ENSMUST00000113706 Nova2D3YVV7 556 aaKnown RBP17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 AoahO35298 574 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Krt18P05784 423 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Nab2Q61127 525 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 NelfbQ8C4Y3 580 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Trappc12Q8K2L8 797 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Arl8aQ8VEH3 186 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Abcb6Q9DC29 842 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Pkd2l2Q9JLG4 621 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Prl2c5Q9JLV9 222 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Plcb1Q9Z1B3 1216 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Ccdc121E9Q6D3 323 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Gabpb2P81069 414 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Zfp397Q7TNK4 527 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Gys2Q8VCB3 704 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Creld2Q9CYA0 350 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Ubiad1Q9DC60 336 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Chaf1aQ9QWF0 911 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Uchl5Q9WUP7 329 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Scn3aA2ASI5 1947 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Siah1bQ06985 282 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Pnma5Q5DTT8 618 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Mns1Q61884 491 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Slc4a8Q8JZR6 1089 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 4921524L21RikQ9D5T2 438 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 EhhadhQ9DBM2 718 aa17.79■□□□□ 0.44
Trim39-203ENSMUST00000113706 Ccdc88cQ6VGS5 2009 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 Rad51bO35719 350 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 Sox5P35710 763 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 Cdc25aP48964 514 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 Hoxa13Q62424 386 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 Fam161bQ8CB59 589 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 Brd3Q8K2F0 726 aaKnown RBP17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 Scgb2b18A0A087WPA9 112 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 Gm5737A0A140LI11 423 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 Nf2P46662 596 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 Mmp14P53690 582 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 GmpsQ3THK7 693 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 Islr2Q5RKR3 745 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 Kiaa0754Q69ZZ9 979 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 Dcaf8Q8N7N5 591 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 F11Q91Y47 624 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 Git2Q9JLQ2 708 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 GsdmeQ9Z2D3 512 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 NinQ61043 2035 aa17.78■□□□□ 0.44
Trim39-203ENSMUST00000113706 D830030K20RikE9PYQ5 218 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Gm3043K7N693 218 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Gm16440K7N6G6 218 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Gm2244L7N2A3 218 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Gm3278L7N2D2 218 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Gm8271L7N2E2 218 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 PpardP35396 440 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Nol4P60954 483 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Ovgp1Q62010 721 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 MyripQ8K3I4 856 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Ushbp1Q8R370 680 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 BaatQ91X34 420 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Cfap45Q9D9U9 551 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Mkrn1Q9QXP6 481 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Vav3Q9R0C8 847 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Pcif1P59114 706 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Mcm6P97311 821 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Asic1Q6NXK8 526 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 Ppil2Q9D787 521 aa17.77■□□□□ 0.44
Trim39-203ENSMUST00000113706 LdhbP16125 334 aaKnown RBP17.77■□□□□ 0.43
Trim39-203ENSMUST00000113706 Bace1P56818 501 aa17.77■□□□□ 0.43
Trim39-203ENSMUST00000113706 Rps12P63323 132 aaKnown RBP17.77■□□□□ 0.43
Trim39-203ENSMUST00000113706 Phf20l1Q8CCJ9 1013 aa17.77■□□□□ 0.43
Trim39-203ENSMUST00000113706 Ifih1Q8R5F7 1025 aa17.77■□□□□ 0.43
Trim39-203ENSMUST00000113706 Anapc4Q91W96 807 aa17.77■□□□□ 0.43
Trim39-203ENSMUST00000113706 Mrpl11Q9CQF0 192 aaKnown RBP17.77■□□□□ 0.43
Trim39-203ENSMUST00000113706 Nap1l4Q78ZA7 375 aaKnown RBP17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Fbxo28Q8BIG4 368 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Magea6O89010 325 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 Tph1P17532 447 aa17.76■□□□□ 0.43
Trim39-203ENSMUST00000113706 CtcfQ61164 736 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 84.6 ms