RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Kcnk9Q3LS21 402 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Fam81aQ3UXZ6 364 aa19.87■□□□□ 0.77
Trim71-201ENSMUST00000111816 Prmt9Q3U3W5 846 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Liat1Q810M6 228 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Gmeb1Q9JL60 562 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Ect2Q07139 913 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Gpbp1Q6NXH3 473 aaKnown RBP19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Q80Y73 168 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Tomm70Q9CZW5 611 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Ccdc151Q8BSN3 593 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Gm28360A0A087WR25 190 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Casp14O89094 257 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Gramd1bQ80TI0 738 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Kdm4cQ8VCD7 1054 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Nfil3O08750 462 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Akr1b7P21300 316 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Serpina1eQ00898 413 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Tdrd7Q8K1H1 1086 aaKnown RBP19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 ParnQ8VDG3 624 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 EsrraO08580 422 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Lig1P37913 916 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 EcsitQ9QZH6 435 aa19.86■□□□□ 0.77
Trim71-201ENSMUST00000111816 Gm30191A0A0U1RNT7 187 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Cdc23Q8BGZ4 597 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Iqcb1Q8BP00 598 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 GphnQ8BUV3 769 aaKnown RBP19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Gdap1O88741 358 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Dmrt2Q8BG36 561 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Ttc27Q8CD92 847 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Mtrf1Q8K126 446 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Serpina1bP22599 413 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Cyth2P63034 400 aaKnown RBP19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Q6PD19 689 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Trim56Q80VI1 734 aaKnown RBP19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Pabpn1Q8CCS6 302 aaKnown RBP19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Tceanc2Q8R2M0 207 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Chchd6Q91VN4 273 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Taf11Q99JX1 211 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 PogzQ8BZH4 1409 aaKnown RBP19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 CiitaP79621 1155 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Mphosph8Q3TYA6 858 aaKnown RBP19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Kif1bQ60575 1816 aaKnown RBP19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 S100a6P14069 89 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Ccdc15Q8C9M2 810 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Zbtb18Q9WUK6 522 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Cacna2d1O08532 1103 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Crybg3Q80W49 1005 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Armcx3Q8BHS6 379 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Mis18aQ9CZJ6 204 aa19.85■□□□□ 0.77
Trim71-201ENSMUST00000111816 Ogfod1Q3U0K8 545 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 Lrrd1Q8C0R9 853 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 Batf3Q9D275 118 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 Psmc2P46471 433 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 Sycp3P70281 254 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 Fbxo9Q8BK06 437 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 3830403N18RikQ9D6C3 208 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 A0A1W2P7S8 802 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 Cdc5lQ6A068 802 aaKnown RBP19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 HdlbpQ8VDJ3 1268 aaKnown RBP19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 OcrlQ6NVF0 900 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 Trim36Q80WG7 729 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 Snx2Q9CWK8 519 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 Dnaaf5B9EJR8 853 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 Prim1P20664 417 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 Klhl41A2AUC9 606 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 DgkiD3YWQ0 1071 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 AdkP55264 361 aa19.84■□□□□ 0.77
Trim71-201ENSMUST00000111816 Osbpl6Q8BXR9 959 aa19.83■□□□□ 0.77
Trim71-201ENSMUST00000111816 PparaP23204 468 aa19.83■□□□□ 0.77
Trim71-201ENSMUST00000111816 Pdia3P27773 505 aaKnown RBP19.83■□□□□ 0.77
Trim71-201ENSMUST00000111816 Nme8Q715T0 586 aa19.83■□□□□ 0.77
Trim71-201ENSMUST00000111816 Sde2Q8K1J5 448 aaKnown RBP19.83■□□□□ 0.77
Trim71-201ENSMUST00000111816 Gcc2Q8CHG3 1679 aa19.83■□□□□ 0.77
Trim71-201ENSMUST00000111816 NficP70255 439 aa19.83■□□□□ 0.77
Trim71-201ENSMUST00000111816 Krt9Q6RHW0 743 aa19.83■□□□□ 0.77
Trim71-201ENSMUST00000111816 Ccnyl1D3YUJ3 367 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Rnf207Q3V3A7 635 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 SrlQ7TQ48 910 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Ehd2Q8BH64 543 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 L3mbtl3Q8BLB7 883 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Haus6Q6NV99 933 aaKnown RBP19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 9230110C19RikQ8CC70 267 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Tp53bp2Q8CG79 1128 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Mmrn1B2RPV6 1210 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 XlrP05531 208 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Runx1t1Q61909 577 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Trpv6Q91WD2 767 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Acsbg1Q99PU5 721 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Psmd10Q9Z2X2 231 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Stxbp3Q60770 592 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Tbc1d10bQ8BHL3 798 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Sfr1Q8BP27 319 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Wdr60Q8C761 999 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Krt27Q9Z320 448 aa19.83■□□□□ 0.76
Trim71-201ENSMUST00000111816 Rnaseh1O70338 285 aa19.82■□□□□ 0.76
Trim71-201ENSMUST00000111816 Rps6kb1Q8BSK8 525 aa19.82■□□□□ 0.76
Trim71-201ENSMUST00000111816 Dhx30Q99PU8 1217 aaKnown RBP19.82■□□□□ 0.76
Trim71-201ENSMUST00000111816 Gm20911A0A087WSS0 222 aa19.82■□□□□ 0.76
Trim71-201ENSMUST00000111816 Apol11bE9PUZ0 337 aa19.82■□□□□ 0.76
Trim71-201ENSMUST00000111816 Mcmdc2E9Q956 681 aa19.82■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms