RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Nedd1P33215 660 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Map4k1P70218 827 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 4933416C03RikQ3V063 378 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Gga3Q8BMI3 718 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Appl2Q8K3G9 662 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Ppp2r5dQ91V89 594 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Lmbr1Q9JIT0 490 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Zfp853A0A1D5RM95 733 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Cfap58B2RW38 873 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Adamts19P59509 1210 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Fndc3bQ6NWW9 1207 aaKnown RBP11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Atg4cQ811C2 458 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Clic6Q8BHB9 596 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Senp7Q8BUH8 1037 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Lmbrd1Q8K0B2 537 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Scn3aA2ASI5 1947 aa11.25□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 AW822073A0A0N4SUK1 652 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Aco1P28271 889 aaKnown RBP11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Mcm4P49717 862 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Pcdhb14Q6PB90 796 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Trnp1Q80ZI1 223 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Ccdc150Q8CDI7 1110 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Washc1Q8VDD8 475 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 DaglbQ91WC9 669 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Krt34Q9D646 392 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Plcg1Q62077 1302 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Cacna1fQ9JIS7 1985 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Dicer1Q8R418 1916 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Rsbn1lD3Z0K6 821 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Rsph10bE9PYQ0 876 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 FosP01101 380 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Lamp1P11438 406 aaKnown RBP11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Tdo2P48776 406 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Sox10Q04888 466 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Btg1-ps1Q3V0S2 161 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Btg1-ps2Q3V0X0 161 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Rrp12Q6P5B0 1295 aaKnown RBP11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Med4Q9CQA5 270 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Arhgef25Q9CWR0 618 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 TnmdQ9EP64 317 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Celf5D3Z4T1 395 aaKnown RBP11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Gm10134F6ZQC6 126 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Trappc10Q3TLI0 1259 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 KhsrpQ3U0V1 748 aaKnown RBP11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Tmem132dQ76HP3 1097 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Ivns1abpQ920Q8 642 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Serpinb3bQ9D1Q5 387 aa11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Polr2dQ9D7M8 142 aaKnown RBP11.24□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 PtmaP26350 111 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Pfkfb1P70266 471 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 SelpQ01102 768 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Cep120Q7TSG1 988 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Mbtps2Q8CHX6 515 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Tm4sf4Q91XD3 202 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 LpxnQ99N69 386 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Mrvi1Q9WUX5 899 aaKnown RBP11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Gm9992B2RWK3 458 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Prl2c1Q5SVL9 228 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 BcrQ6PAJ1 1270 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Unc93aQ710D3 458 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 IqcgQ80W32 419 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Dlk2Q8K1E3 382 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Coa7Q921H9 231 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Tmx2Q9D710 295 aaKnown RBP11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Rexo5D3YW29 759 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Bin1O08539 588 aaKnown RBP11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 ImpactO55091 318 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 FlgP11088 336 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Hmgcs2P54869 508 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Mtss1lQ6P9S0 715 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Pxylp1Q8BHA9 480 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Glipr1l2Q9CQ35 332 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Kcnh3Q9WVJ0 1095 aa11.23□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Gm5134E9QAB5 671 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 VegfbP49766 207 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Lrrfip1Q3UZ39 729 aaKnown RBP11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Gpbp1Q6NXH3 473 aaKnown RBP11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Rnf214Q8BFU3 668 aaKnown RBP11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Mical1Q8VDP3 1048 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Tpm3-rs7D3Z2H9 248 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Prpmp5E9PXN1 296 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Stard7Q8R1R3 373 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Pex3Q9QXY9 372 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Oip5A2AQ14 241 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 TxnP10639 105 aaKnown RBP11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Neurl1bQ0MW30 546 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Slc2a13Q3UHK1 637 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Sun3Q5SS91 320 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Ccdc189Q6NZQ0 333 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 P2ry10Q8BFU7 328 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Zscan22Q8BGS5 496 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Zfp202Q8C879 641 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Ago4Q8CJF8 861 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Calml3Q9D6P8 149 aa11.22□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Kansl3A2RSY1 903 aaKnown RBP11.21□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Evi5P97366 809 aa11.21□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Arhgef19Q8BWA8 802 aa11.21□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Rtp1Q8C8C1 263 aa11.21□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 BcamQ9R069 622 aa11.21□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Prr14lE9Q7C4 1971 aa11.21□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 44.1 ms