RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Arhgap5P97393 1501 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Kidins220E9Q9B7 1793 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 EsrraO08580 422 aa9.59□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Gsc2P56916 198 aa9.59□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Prss55Q14BX2 321 aa9.59□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Arnt2Q61324 712 aa9.59□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Sez6Q7TSK2 991 aa9.59□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Q8BTG6 205 aa9.59□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Leng8Q8CBY3 785 aaKnown RBP9.59□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 KnstrnQ9D9Z1 312 aaKnown RBP9.59□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 B4galt4Q9JJ04 344 aa9.59□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Tubd1Q9R1K7 455 aa9.59□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Qser1A2BIE1 1698 aa9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Gm12248A0A1W2P8B8 313 aa9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Gpr27O54897 379 aa9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Stat1P42225 749 aa9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Irf7P70434 457 aa9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Prss57Q14B24 284 aa9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Pdlim7Q3TJD7 457 aa9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Ppp1r13lQ5I1X5 824 aa9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Tacc1Q6Y685 774 aa9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Cfap97Q6ZPR1 541 aa9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Myef2Q8C854 591 aaKnown RBP9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Ints5Q8CHT3 1018 aa9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Mkl1Q8K4J6 964 aa9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Yaf2Q99LW6 179 aa9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 RnmtQ9D0L8 465 aaKnown RBP9.58□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Gm32742A0A1B0GT42 1604 aa9.57□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Adcy10Q8C0T9 1614 aa9.57□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Cnbd1B1AWM0 430 aa9.57□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 AU015836B2RUM3 263 aa9.57□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Kif23E9Q5G3 953 aa9.57□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Zfp13P10754 512 aa9.57□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 ADGRF3Q58Y75 991 aa9.57□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Lcp1Q61233 627 aaKnown RBP9.57□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Fam149b1Q6NSV7 578 aa9.57□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Adat2Q6P6J0 191 aa9.57□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Crybg3Q80W49 1005 aa9.57□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Fitm1Q91V79 292 aa9.57□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Aipl1Q924K1 328 aa9.57□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Tlr3Q99MB1 905 aa9.57□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Synj2Q9D2G5 1434 aa9.56□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Rnf217D3YYI7 515 aa9.56□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Slc27a2O35488 620 aa9.56□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Wipf3P0C7L0 485 aa9.56□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Vsig8Q6P3A4 417 aa9.56□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Med26Q7TN02 588 aa9.56□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Usp40Q8BWR4 1235 aa9.56□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Mtmr3Q8K296 1196 aa9.56□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Prodh2Q8VCZ9 456 aa9.56□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Scrn1Q9CZC8 414 aa9.56□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Minpp1Q9Z2L6 481 aa9.56□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Kdm6bQ5NCY0 1641 aa9.56□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Cfap74Q3UY96 1578 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 1700011I03RikE9PYL8 271 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Zfp788E9Q980 884 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Gm9857F7CXR1 130 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Il1rl1P14719 567 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Gpr85P60894 370 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Kcnab2P62482 367 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Hmgb1P63158 215 aaKnown RBP9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 A1bgQ19LI2 512 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Fam20cQ5MJS3 579 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Tnpo3Q6P2B1 923 aaKnown RBP9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Cnksr3Q8BMA3 555 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Arhgap28Q8BN58 729 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Rufy2Q8R4C2 606 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Sirt2Q8VDQ8 389 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Vmn1r45Q8VIC7 318 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Mcm8Q9CWV1 833 aa9.55□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Lmtk2Q3TYD6 1471 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Zscan4-ps1A0A1C7CYV3 506 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 MndalD0QMC3 538 aaKnown RBP9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 NcstnP57716 708 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Ebf1Q07802 591 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 ScimpQ3UU41 150 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Q3V0E1 1183 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Tbc1d1Q60949 1255 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Ovgp1Q62010 721 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 ThrspQ62264 150 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 AktipQ64362 292 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Rrp12Q6P5B0 1295 aaKnown RBP9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Spata7Q80VP2 582 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Gprasp2Q8BUY8 826 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 NcaphQ8C156 731 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Glis2Q8VDL9 521 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Mtmr14Q8VEL2 648 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Fam166aQ9D4K5 319 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Idh3aQ9D6R2 366 aaKnown RBP9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 MNCb-2990Q9JJ93 142 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Ncapd3Q6ZQK0 1506 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Kdm5cP41230 1554 aa9.54□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 OvosQ3UU35 1456 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Abcc3B2RX12 1523 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Fcgr4A0A0B4J1G0 249 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Gm12695A2AGB2 545 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Nt5c1aA3KFX0 365 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Adam6aB2RSY5 754 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Speer4aF8VPX6 267 aa9.53□□□□□ -0.88
Ccdc54-201ENSMUST00000062439 Ampd3O08739 766 aa9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms