RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Atp2b4Q6Q477 1205 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 B4galnt4Q766D5 1034 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Cgref1Q8R1U2 281 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Pcdha12Q91Y18 950 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Sel1lQ9Z2G6 790 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Ltbp2O08999 1813 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Ifi207E9Q3L4 978 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Psmd14O35593 310 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Ap1g2O88512 791 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Snap25P60879 206 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Scg2Q03517 617 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Skap2Q3UND0 358 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Ttbk2Q3UVR3 1243 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Kctd1Q5M956 257 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Nell2Q61220 819 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Glra4Q61603 456 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Lrrn2Q6PHP6 730 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Sdad1Q80UZ2 687 aaKnown RBP7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Vipas39Q8BGQ1 491 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Fam161bQ8CB59 589 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Adcy3Q8VHH7 1145 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Yipf1Q91VU1 306 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Osbpl1aQ91XL9 950 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Xrcc4Q924T3 326 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Gtf3c6Q9D8P7 227 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Akap8Q9DBR0 687 aaKnown RBP7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Cd2apQ9JLQ0 637 aa7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Uso1Q9Z1Z0 959 aaKnown RBP7.99□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Nme9A0A1L1SUL6 329 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Flvcr1B2RXV4 560 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Trim55G3X8Y1 545 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Nck2O55033 380 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Calm1P0DP26 149 aaKnown RBP7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Calm2P0DP27 149 aaKnown RBP7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Calm3P0DP28 149 aaKnown RBP7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 MarcksP26645 309 aaKnown RBP7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Stim1P70302 685 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Cd37Q61470 281 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 RragbQ6NTA4 374 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 BcrQ6PAJ1 1270 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Ppm1eQ80TL0 749 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 BC048507Q80ZS7 89 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Gpcpd1Q8C0L9 675 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Onecut3Q8K557 490 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Ciapin1Q8WTY4 309 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 4930550L24RikQ99PA7 320 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Cfap45Q9D9U9 551 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Sgpp1Q9JI99 430 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Trp53inp1Q9QXE4 239 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Myh8P13542 1937 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Zscan18E9PUD6 809 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Tmem132bF7BAB2 1078 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Vmn2r68L7N2B3 851 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Abcd1P48410 736 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Tubb4bP68372 445 aaKnown RBP7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Gngt1Q61012 74 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Pabpc4Q6PHQ9 660 aaKnown RBP7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Baiap3Q80TT2 1134 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Smc2Q8CG48 1191 aaKnown RBP7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Slc4a8Q8JZR6 1089 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Tldc1Q8K0P3 455 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Tmem60Q8K174 133 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 E2f4Q8R0K9 410 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Zbed3Q9D0L1 228 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Klhl10Q9D5V2 608 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Rcan1Q9JHG6 198 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 AmfrQ9R049 643 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Zfp646Q6NV66 1788 aa7.98□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Pfkfb3A7UAK5 555 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Mboat4P0C7A3 435 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Fdx1P46656 188 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Kdm7aQ3UWM4 940 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Insm1Q63ZV0 521 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 PnocQ64387 187 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Rbm12b2Q66JV4 834 aaKnown RBP7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Antxr2Q6DFX2 487 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Ddx31Q6NZQ2 687 aaKnown RBP7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Prpf40bQ80W14 870 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Trim6Q8BGE7 488 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 NelfbQ8C4Y3 580 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Calhm4Q8CE93 315 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Ccdc14Q8K2J4 934 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Znrd1-asQ8R0E5 213 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Sar1bQ9CQC9 198 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Trap1Q9CQN1 706 aaKnown RBP7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Galntl5Q9D4M9 431 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 SyncQ9EPM5 470 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Abhd2Q9QXM0 425 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Col5a2Q3U962 1497 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Scgb2b11A0A087WR49 112 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Slc39a2G3X943 309 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Vmn2r78K7N6U5 853 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 MthfslL7N466 203 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Pak1O88643 545 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Slc12a2P55012 1205 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Apba2P98084 750 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Sema4bQ62179 823 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Tas2r124Q7M718 309 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Lrsam1Q80ZI6 727 aa7.97□□□□□ -1.13
Clrn1-202ENSMUST00000055636 Ttc26Q8BS45 554 aa7.97□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms