RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 AdpgkQ8VDL4 496 aa16.17■□□□□ 0.18
Msx3-201ENSMUST00000055353 Plcb1Q9Z1B3 1216 aa16.17■□□□□ 0.18
Msx3-201ENSMUST00000055353 Frmpd4A2AFR3 1320 aa16.17■□□□□ 0.18
Msx3-201ENSMUST00000055353 Fer1l6E0CZ42 1862 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Eif6O55135 245 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Ranbp1P34022 203 aaKnown RBP16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Prpf38aQ4FK66 312 aaKnown RBP16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Tnni3kQ5GIG6 834 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Shc3Q61120 474 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Fkbp3Q62446 224 aaKnown RBP16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Igdcc3Q8BQC3 813 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 HibadhQ99L13 335 aaKnown RBP16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Pkd2l2Q9JLG4 621 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Arl6ip4Q9JM93 229 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 AgtP11859 477 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Tal1P22091 329 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Lilrb3P97484 841 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 NeblQ0II04 452 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Krit1Q6S5J6 736 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Bbs9Q811G0 885 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Tmem179Q8BHH9 233 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Eif3cQ8R1B4 911 aaKnown RBP16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 Alpk1Q9CXB8 1231 aa16.16■□□□□ 0.18
Msx3-201ENSMUST00000055353 NpcdF8VQB8 469 aa16.15■□□□□ 0.18
Msx3-201ENSMUST00000055353 Eya3P97480 510 aa16.15■□□□□ 0.18
Msx3-201ENSMUST00000055353 EregQ61521 162 aa16.15■□□□□ 0.18
Msx3-201ENSMUST00000055353 NkrfQ8BY02 690 aaKnown RBP16.15■□□□□ 0.18
Msx3-201ENSMUST00000055353 Cdk8Q8R3L8 464 aa16.15■□□□□ 0.18
Msx3-201ENSMUST00000055353 Kremen1Q99N43 473 aa16.15■□□□□ 0.18
Msx3-201ENSMUST00000055353 Dpf1Q9QX66 387 aa16.15■□□□□ 0.18
Msx3-201ENSMUST00000055353 Atp8b1Q148W0 1251 aa16.15■□□□□ 0.18
Msx3-201ENSMUST00000055353 Zcwpw1Q6IR42 630 aa16.15■□□□□ 0.18
Msx3-201ENSMUST00000055353 HyiQ8R1F5 277 aa16.15■□□□□ 0.18
Msx3-201ENSMUST00000055353 Myo1cQ9WTI7 1063 aa16.15■□□□□ 0.18
Msx3-201ENSMUST00000055353 Men1O88559 611 aaKnown RBP16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Pafah1b1P63005 410 aaKnown RBP16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Kcnj11Q61743 390 aa16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Zbtb39Q6PDK0 712 aa16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 HmcesQ8R1M0 353 aaKnown RBP16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Eif4a3Q91VC3 411 aaKnown RBP16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Rbm5Q91YE7 815 aaKnown RBP16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Prpf6Q91YR7 941 aaKnown RBP16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Sec14l1A8Y5H7 715 aa16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Apol6B7ZC55 329 aa16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Qtrt2B8ZXI1 415 aa16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Trap1aP19473 224 aa16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 GnaqP21279 359 aa16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Actn4P57780 912 aaKnown RBP16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Ano9P86044 747 aa16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Gas1Q01721 343 aa16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Acot10Q32MW3 439 aa16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Sf3b2Q3UJB0 878 aaKnown RBP16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Znf827Q505G8 1078 aa16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Cep70Q6IQY5 616 aa16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Mettl25Q6NXH8 597 aa16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Tbc1d23Q8K0F1 684 aa16.14■□□□□ 0.17
Msx3-201ENSMUST00000055353 Ltn1Q6A009 1767 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 GakQ99KY4 1305 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Tcp10bE9PYJ0 438 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Kifap3P70188 793 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Cct5P80316 541 aaKnown RBP16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Ccdc42Q5SV66 316 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Spag7Q7TNE3 227 aaKnown RBP16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 RragaQ80X95 313 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Fam177a1Q8BR63 207 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Tldc1Q8K0P3 455 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Hs2st1Q8R3H7 356 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 VillQ91YD6 859 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Rhobtb3Q9CTN4 611 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Ppp1r3gQ9CW07 347 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Ndst4Q9EQW8 872 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Sertad1Q9JL10 236 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Rps6ka4Q9Z2B9 773 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Gm7168A0AUV4 508 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Gm1993A6X8I0 212 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 SlxD3Z347 212 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 DnttP09838 530 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Lrrc43Q3V0L5 667 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Grm4Q68EF4 912 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 WdpcpQ8C456 722 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Glrx3Q9CQM9 337 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Tmem192Q9CXT7 266 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Kank3Q9Z1P7 791 aa16.13■□□□□ 0.17
Msx3-201ENSMUST00000055353 Ltbp2O08999 1813 aa16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Klra1P20937 262 aa16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Ankrd24Q80VM7 985 aa16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 D130040H23RikQ8BII3 405 aa16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Mettl5Q8K1A0 209 aa16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Hps4Q99KG7 671 aa16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Syce1Q9D495 329 aa16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Trmt112Q9DCG9 125 aa16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Rpf2Q9JJ80 306 aaKnown RBP16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Bpifb4A2BGH0 617 aa16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Lrrc32G3XA59 663 aa16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Kifc2O08672 792 aa16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Mx1P09922 631 aa16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Slc12a2P55012 1205 aa16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Tubb4bP68372 445 aaKnown RBP16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Nlrx1Q3TL44 975 aa16.12■□□□□ 0.17
Msx3-201ENSMUST00000055353 Psg29Q3URN6 468 aa16.12■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms