RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 RragbQ6NTA4 374 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ccdc148Q6P5U8 527 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ireb2Q811J3 963 aaKnown RBP9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Gprc5cQ8K3J9 440 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Bco2Q99NF1 532 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Mrpl11Q9CQF0 192 aaKnown RBP9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Fzd9Q9R216 592 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Megf6Q80V70 1572 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ccdc173A0JLY1 547 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Gm44503E9PYU5 387 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Gm38392E9Q2A2 434 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Stat3P42227 770 aaKnown RBP9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ccna1Q61456 421 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Sez6lQ6P1D5 963 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Vgll2Q8BGW8 322 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 CnstQ8CBC4 711 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Dnaaf4Q8R368 420 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Cabp7Q91ZM8 215 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Rfc4Q99J62 364 aa9.83□□□□□ -0.84
Trim39-201ENSMUST00000042717 Zkscan7E9PVW1 718 aa9.82□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ppp1r9aH3BJD6 1292 aa9.82□□□□□ -0.84
Trim39-201ENSMUST00000042717 Luc7l2Q7TNC4 392 aaKnown RBP9.82□□□□□ -0.84
Trim39-201ENSMUST00000042717 PdgfdQ925I7 370 aa9.82□□□□□ -0.84
Trim39-201ENSMUST00000042717 NkapQ9D0F4 415 aaKnown RBP9.82□□□□□ -0.84
Trim39-201ENSMUST00000042717 S1pr4Q9Z0L1 386 aa9.82□□□□□ -0.84
Trim39-201ENSMUST00000042717 Cpb1B2RS76 415 aa9.82□□□□□ -0.84
Trim39-201ENSMUST00000042717 Nr1i2O54915 431 aa9.82□□□□□ -0.84
Trim39-201ENSMUST00000042717 Nbr1P97432 988 aa9.82□□□□□ -0.84
Trim39-201ENSMUST00000042717 Nlrx1Q3TL44 975 aa9.82□□□□□ -0.84
Trim39-201ENSMUST00000042717 Caps2Q8BUG5 550 aa9.82□□□□□ -0.84
Trim39-201ENSMUST00000042717 Trim44Q9QXA7 346 aa9.82□□□□□ -0.84
Trim39-201ENSMUST00000042717 Fyb2A2A995 729 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Acad12D3Z7X0 555 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Fam184aE9PW83 1143 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Gm15448F6PZL4 682 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Atp11aP98197 1187 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Kcnj11Q61743 390 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ccdc189Q6NZQ0 333 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Adgra1Q8C4G9 578 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Sgip1Q8VD37 806 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Q9DAQ4 598 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Il21rQ9JHX3 529 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Mrvi1Q9WUX5 899 aaKnown RBP9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Tulp1Q9Z273 543 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Dcaf15Q6PFH3 600 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Igsf3Q6ZQA6 1194 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 GypcQ78HU7 95 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Pde5aQ8CG03 865 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Dnajc19Q9CQV7 116 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Cnpy2Q9QXT0 182 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 BcamQ9R069 622 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 SrcapA0A087WQ44 3271 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Scn3aA2ASI5 1947 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Skint3A7TZF0 458 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Brpf3B2KF05 1204 aaKnown RBP9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ccdc78D3Z5T1 437 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Rnf216P58283 853 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Adcy5P84309 1262 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 GabpaQ00422 454 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Mex3cQ05A36 652 aaKnown RBP9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Znf618Q80YY7 953 aaKnown RBP9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Coa7Q921H9 231 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Mettl16Q9CQG2 553 aaKnown RBP9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Baiap2l1Q9DBJ3 514 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Prg3Q9JL95 222 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Plcb1Q9Z1B3 1216 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ccdc88cQ6VGS5 2009 aa9.81□□□□□ -0.84
Trim39-201ENSMUST00000042717 Zscan25B2RX31 543 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 Brd9Q3UQU0 596 aaKnown RBP9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 Olfr832Q7TRG9 312 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 Lrrc24Q8BHA1 521 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 Appl2Q8K3G9 662 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 F11Q91Y47 624 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 Tab2Q99K90 693 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 2310002L09RikQ9D7L5 217 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 EhhadhQ9DBM2 718 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 Cdc27A2A6Q5 825 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 Map7d1A2AJI0 846 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 Wdr70Q3TWF6 657 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 Lrrfip1Q3UZ39 729 aaKnown RBP9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 Rasa3Q60790 834 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 Cep135Q6P5D4 1140 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 P2ry10Q8BFU7 328 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 Cep128Q8BI22 1102 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 Serpinb13Q8CDC0 389 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 DmtnQ9WV69 405 aa9.8□□□□□ -0.84
Trim39-201ENSMUST00000042717 Cacna1fQ9JIS7 1985 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ripor3A1L3T7 938 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 NpcdF8VQB8 469 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Hmx1O70218 332 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 FosP01101 380 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ccnd3P30282 292 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Meis1Q60954 390 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Senp5Q6NXL6 749 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Zdhhc14Q8BQQ1 489 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Ago4Q8CJF8 861 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Mmel1Q9JLI3 765 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Usp31E9Q6Y8 1344 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Disp2Q8CIP5 1345 aa9.79□□□□□ -0.84
Trim39-201ENSMUST00000042717 Cst8P32766 142 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms