RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Kctd10Q922M3 315 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Prc1Q99K43 603 aaKnown RBP10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Fmn2Q9JL04 1578 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Erich2E9Q1A6 463 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 YwhagP61982 247 aaKnown RBP10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ces3aQ63880 571 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ces3bQ8VCU1 571 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 MgarpQ8VI64 283 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Rabep2Q91WG2 554 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 StrbpQ91WM1 672 aaKnown RBP10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Adarb2Q9JI20 745 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gm5936A2BG95 728 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gm5640A3KG49 728 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Arhgap10Q6Y5D8 786 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Cnot10Q8BH15 744 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 SnrkQ8VDU5 748 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Add3Q9QYB5 706 aaKnown RBP10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Trpm2Q91YD4 1506 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 TprnA2AI08 749 aaKnown RBP10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Rabgap1A2AWA9 1064 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Dnajb6O54946 365 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Tnnc2P20801 160 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Cep70Q6IQY5 616 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Mettl24Q8CCB5 363 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Parp10Q8CIE4 960 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Sgk1Q9WVC6 431 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Znf335A2A5K6 1337 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Krt78E9Q0F0 1068 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Cct8l1Q80YT3 562 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Slc17a8Q8BFU8 601 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Zc3h6Q8BYK8 1177 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Csgalnact2Q8C1F4 542 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Abhd8Q8R0P8 439 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Cbwd1Q8VEH6 393 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Krt5Q922U2 580 aa10.71□□□□□ -0.69
Syne1-201ENSMUST00000041639 Syne3Q4FZC9 975 aa10.71□□□□□ -0.7
Syne1-201ENSMUST00000041639 Acap3Q6NXL5 833 aa10.71□□□□□ -0.7
Syne1-201ENSMUST00000041639 Trim56Q80VI1 734 aaKnown RBP10.71□□□□□ -0.7
Syne1-201ENSMUST00000041639 Tmem119Q8R138 280 aa10.71□□□□□ -0.7
Syne1-201ENSMUST00000041639 Cap2Q9CYT6 476 aa10.71□□□□□ -0.7
Syne1-201ENSMUST00000041639 Gm45194A0A140LJG2 572 aa10.71□□□□□ -0.7
Syne1-201ENSMUST00000041639 ErmardE9Q048 622 aa10.71□□□□□ -0.7
Syne1-201ENSMUST00000041639 Usp53P15975 1069 aa10.71□□□□□ -0.7
Syne1-201ENSMUST00000041639 Atp1b3P97370 278 aa10.71□□□□□ -0.7
Syne1-201ENSMUST00000041639 Stx2Q00262 289 aa10.71□□□□□ -0.7
Syne1-201ENSMUST00000041639 Panx2Q6IMP4 677 aa10.71□□□□□ -0.7
Syne1-201ENSMUST00000041639 Eno4Q8C042 619 aa10.71□□□□□ -0.7
Syne1-201ENSMUST00000041639 Myo1aO88329 1043 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ctnnd1P30999 938 aaKnown RBP10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 InhbaQ04998 424 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Kctd1Q5M956 257 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Enox1Q8BHR2 643 aaKnown RBP10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 MycbpQ9EQS3 103 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Pcdha4O88689 947 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Yipf3Q3UDR8 347 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Cog7Q3UM29 770 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Myo1gQ5SUA5 1024 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Bsdc1Q80Y55 427 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Nr2e3Q9QXZ7 395 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Adcy9P51830 1353 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Kcnb2A6H8H5 907 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Sox5P35710 763 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Sval3Q76I99 144 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Polr2bQ8CFI7 1174 aaKnown RBP10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Kcnv2Q8CFS6 562 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Eif4a3Q91VC3 411 aaKnown RBP10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Rmi1Q9D4G9 616 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Q9DAQ4 598 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Krt27Q9Z320 448 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 S100a5P63084 93 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 DSCC1Q14AI0 399 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Meis1Q60954 390 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Tbc1d30Q69ZT9 766 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 OcrlQ6NVF0 900 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Rbbp5Q8BX09 538 aaKnown RBP10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Gfpt2Q9Z2Z9 682 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Kdm5aQ3UXZ9 1690 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Kif1bQ60575 1816 aaKnown RBP10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Pgrmc1O55022 195 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 ItkQ03526 625 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 MarsQ68FL6 902 aaKnown RBP10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Oxsr1Q6P9R2 527 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Antxr1Q9CZ52 562 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ppfia4B8QI36 1187 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ccnyl1D3YUJ3 367 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Timm44O35857 452 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 DnttP09838 530 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Pnma5Q5DTT8 618 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Nacc1Q7TSZ8 514 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ccdc68Q8BVC4 333 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Lmbrd1Q8K0B2 537 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Frmd4bQ920B0 1035 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ciao1Q99KN2 339 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Vstm4T1NXB5 319 aa10.7□□□□□ -0.7
Syne1-201ENSMUST00000041639 Cyp3a57D3YYZ0 503 aa10.69□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ankrd6Q69ZU8 712 aa10.69□□□□□ -0.7
Syne1-201ENSMUST00000041639 Tmtc4Q8BG19 741 aa10.69□□□□□ -0.7
Syne1-201ENSMUST00000041639 Ddx19bQ8BZY3 494 aa10.69□□□□□ -0.7
Syne1-201ENSMUST00000041639 Mylk2Q8VCR8 613 aa10.69□□□□□ -0.7
Syne1-201ENSMUST00000041639 Tsc1Q9EP53 1161 aa10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms