RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ttc27Q8CD92 847 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 EhhadhQ9DBM2 718 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 ErmapQ9JLN5 566 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 PcQ05920 1178 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Cdc23Q8BGZ4 597 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Morf4l2Q9R0Q4 288 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ccdc78D3Z5T1 437 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 XlrP05531 208 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Psmc1P62192 440 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Fchsd1Q6PFY1 688 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 LnpkQ7TQ95 425 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Polr2bQ8CFI7 1174 aaKnown RBP15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Fgfr1op2Q9CRA9 253 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Tspan17Q9D7W4 270 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Col20a1Q923P0 1320 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Mug2P28666 1451 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Gm15262A0A140LIQ5 728 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Cops6O88545 324 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ccdc194A0A140LIT1 234 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Dnaaf5B9EJR8 853 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Samsn1P57725 372 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Myl10Q62082 202 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Nlrp4aQ8BU40 982 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Afg3l1Q920A7 789 aaKnown RBP15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 SelenovD3YXG1 328 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 1700011I03RikE9PYL8 271 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Myl1P05977 188 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Nxf2Q4ZGD8 691 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Krt32Q62168 407 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 HelbQ6NVF4 1074 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Cyp26b1Q811W2 512 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Snx5Q9D8U8 404 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Eya2O08575 532 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Zmym1Q3TJB1 983 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Fam180aQ8BR21 173 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Gdap1l1Q8VE33 370 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Prpsap1Q9D0M1 356 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Tmem94Q7TSH8 1360 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Eif4g3Q80XI3 1579 aaKnown RBP15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Olfm3P63056 478 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Myo1fP70248 1099 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ddb1Q3U1J4 1140 aaKnown RBP15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Elf1Q60775 612 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Gimap7Q8R379 293 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Gm3415J3QMS8 315 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 EsrraO08580 422 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Lsg1Q3UM18 644 aaKnown RBP15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Adprhl2Q8CG72 370 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Dhx58Q99J87 678 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Gm3404Q9D506 307 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Rnaseh1O70338 285 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Gna14P30677 355 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Wars2Q9CYK1 360 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ola1Q9CZ30 396 aaKnown RBP15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Atg3Q9CPX6 314 aa15.1■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Krt36B1AQ75 473 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 AU022751B1B0V2 589 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Thumpd3P97770 505 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Tom1O88746 492 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ubxn11Q9D572 484 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Krt1P04104 637 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Hipk4Q3V016 616 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ncoa7Q6DFV7 943 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Rad17Q6NXW6 688 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ddx42Q810A7 929 aaKnown RBP15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Sap30bpQ02614 308 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Trpc1Q61056 793 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Fkbp3Q62446 224 aaKnown RBP15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ccdc169Q8BXX9 214 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Trpv6Q91WD2 767 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Lrriq4A6H6A4 596 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Esr2O08537 530 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Actn1Q7TPR4 892 aaKnown RBP15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Rps6ka5Q8C050 863 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 SnrkQ8VDU5 748 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Rmdn1Q9DCV4 305 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Aldh18a1Q9Z110 795 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 NfkbiaQ9Z1E3 314 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ovgp1Q62010 721 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Stk11Q9WTK7 436 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Wbp4Q61048 376 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ap1s3Q7TN05 154 aa15.09■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Exoc7O35250 697 aa15.08■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Eif6O55135 245 aa15.08■□□□□ 0.01
Col5a1-201ENSMUST00000028280 PaoxQ8C0L6 504 aa15.08■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Trpd52l3Q9CQ14 231 aa15.08■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Cib4Q9D9N5 185 aa15.08■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Gm1661E9Q963 441 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Kifc3O35231 824 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Sycp3P70281 254 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Hif1aQ61221 836 aaKnown RBP15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Lca5Q80ST9 704 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Dnajc6Q80TZ3 938 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Cdk13Q69ZA1 1511 aaKnown RBP15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Zfp449Q8CB76 518 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Wdr7Q920I9 1489 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Trim66Q924W6 1242 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Ttc41Q692V3 1318 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Zc3h18Q0P678 948 aaKnown RBP15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 E330034G19RikQ3UWX6 351 aa15.08■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms