RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Gpr162Q3UN16 588 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Wdr44Q6NVE8 915 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Rbm26Q6NZN0 1012 aaKnown RBP13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Gnl3lQ6PGG6 577 aaKnown RBP13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 F13a1Q8BH61 732 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Camkk2Q8C078 588 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Spata2Q8K004 515 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Nod2Q8K3Z0 1020 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ushbp1Q8R370 680 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Atp6v0a4Q920R6 833 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ubxn1Q922Y1 297 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Arfgap2Q99K28 520 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Efhd1Q9D4J1 240 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Eef1gQ9D8N0 437 aaKnown RBP13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 GgcxQ9QYC7 757 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Stk11Q9WTK7 436 aa13.37□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Cfap44E9Q5M6 1843 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Rgs9bpQ148R9 237 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Phactr4Q501J7 694 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Jade2Q6ZQF7 829 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Efcab14Q8BGQ6 484 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ccdc122Q8BVN0 290 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Lrrc45Q8CIM1 670 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Taf1dQ9D4V4 322 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Nop56Q9D6Z1 580 aaKnown RBP13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Prpf4Q9DAW6 521 aaKnown RBP13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Pik3ap1Q9EQ32 811 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Slc40a1Q9JHI9 570 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Gm28510A0A087WP28 240 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Apol8A2VDH7 339 aaKnown RBP13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Etnk2A7MCT6 385 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ccdc152E9PX14 254 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Chrna9G3X8Z7 479 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Nck2O55033 380 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Parp1P11103 1013 aaKnown RBP13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Cdh15P33146 784 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Nap1l2P51860 460 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Slc9a2Q3ZAS0 814 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Fbxw10Q5SUS0 1030 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Usp17leQ7M764 540 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Slc51bQ80WK2 128 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ascc1Q9D8Z1 356 aaKnown RBP13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Scgb2b12S4R2L0 112 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Igsf9bE9PZ19 1328 aa13.36□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Dennd3A2RT67 1274 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Cyp2c69E9PXC3 491 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Gm4340L7N2C4 268 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 CrcpO35427 148 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Zfpm1O35615 995 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Klc1O88447 541 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 RaraP11416 462 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Hspa9P38647 679 aaKnown RBP13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Cyp2c40P56657 491 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Slc8a1P70414 970 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 HmmrQ00547 794 aaKnown RBP13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Tmtc2Q56A06 836 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 CtcfQ61164 736 aaKnown RBP13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Spag7Q7TNE3 227 aaKnown RBP13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Pspc1Q8R326 523 aaKnown RBP13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Mical1Q8VDP3 1048 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 FliiQ9JJ28 1271 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Tnip1Q9WUU8 647 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Clip2Q9Z0H8 1047 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Pitpnm2Q6ZPQ6 1335 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Myh3P13541 1940 aa13.35□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Gm15262A0A140LIQ5 728 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Cfap70D3YVL2 1141 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Gfpt1P47856 697 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Hmgb1P63158 215 aaKnown RBP13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Pkn1P70268 946 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Sema3eP70275 775 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Zfp781Q0P5U5 243 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Lrrfip1Q3UZ39 729 aaKnown RBP13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Pla2g4fQ50L41 855 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ehbp1Q69ZW3 1231 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Tsga10Q6NY15 697 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Drd5Q8BLD9 478 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Cep95Q8BVV7 827 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Ddx47Q9CWX9 455 aaKnown RBP13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 IcoslgQ9JHJ8 322 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Arl6ip4Q9JM93 229 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Igf2rQ07113 2483 aaKnown RBP13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Vmn2r71L7N2D8 855 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Slc4a4O88343 1079 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 CatspereP0DP43 985 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Serpina1bP22599 413 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Capza3P70190 299 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Myo6Q64331 1265 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Cep70Q6IQY5 616 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Kdm1aQ6ZQ88 853 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Naa15Q80UM3 865 aaKnown RBP13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Iffo1Q8BXL9 562 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Bap1Q99PU7 728 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 MymkQ9D1N4 221 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Plcb1Q9Z1B3 1216 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Myh8P13542 1937 aa13.34□□□□□ -0.27
Ufd1-201ENSMUST00000005394 Bpifb4A2BGH0 617 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Fam186bD3Z420 943 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Gm5134E9QAB5 671 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Tnnc1P19123 161 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms