RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C SWI3P32591 825 aa3.49□□□□□ -1.85
WHI3YNL197C RML2P32611 393 aa3.49□□□□□ -1.85
WHI3YNL197C RFC1P38630 861 aaKnown RBP3.49□□□□□ -1.85
WHI3YNL197C APE4P38821 490 aa3.49□□□□□ -1.85
WHI3YNL197C SSU1P41930 458 aa3.49□□□□□ -1.85
WHI3YNL197C AIM32Q04689 311 aa3.49□□□□□ -1.85
WHI3YNL197C ERG11P10614 530 aa3.48□□□□□ -1.85
WHI3YNL197C RPL3P14126 387 aaKnown RBP3.48□□□□□ -1.85
WHI3YNL197C PRP2P20095 876 aaPredicted RBP3.48□□□□□ -1.85
WHI3YNL197C URE2P23202 354 aaKnown RBP3.48□□□□□ -1.85
WHI3YNL197C KTR5P53966 522 aaPredicted RBP3.48□□□□□ -1.85
WHI3YNL197C IDP3P53982 420 aaKnown RBP3.48□□□□□ -1.85
WHI3YNL197C TOF2Q02208 771 aa3.48□□□□□ -1.85
WHI3YNL197C VTA1Q06263 330 aa3.48□□□□□ -1.85
WHI3YNL197C RRD2Q12461 358 aa3.48□□□□□ -1.85
WHI3YNL197C RRI1Q12468 440 aa3.48□□□□□ -1.85
WHI3YNL197C RPL31BP0C2H9 113 aaKnown RBP3.47□□□□□ -1.85
WHI3YNL197C SNF3P10870 884 aa3.47□□□□□ -1.85
WHI3YNL197C NAT1P12945 854 aaKnown RBP3.47□□□□□ -1.85
WHI3YNL197C RPS2P25443 254 aaKnown RBP3.47□□□□□ -1.85
WHI3YNL197C ERV1P27882 189 aa3.47□□□□□ -1.85
WHI3YNL197C PHO90P39535 881 aa3.47□□□□□ -1.85
WHI3YNL197C CAF130P53280 1122 aaPredicted RBP3.47□□□□□ -1.85
WHI3YNL197C FMP45Q07651 309 aa3.47□□□□□ -1.85
WHI3YNL197C YOR365CQ08844 703 aa3.47□□□□□ -1.85
WHI3YNL197C AFI1Q99222 893 aa3.47□□□□□ -1.85
WHI3YNL197C HOM2P13663 365 aaKnown RBP3.47□□□□□ -1.85
WHI3YNL197C IDH2P28241 369 aaKnown RBP3.47□□□□□ -1.85
WHI3YNL197C YHR210CP38893 341 aa3.47□□□□□ -1.85
WHI3YNL197C MBB1P39534 108 aa3.47□□□□□ -1.85
WHI3YNL197C NET1P47035 1189 aa3.47□□□□□ -1.85
WHI3YNL197C UBP8P50102 471 aa3.47□□□□□ -1.85
WHI3YNL197C COP1P53622 1201 aaKnown RBP3.47□□□□□ -1.85
WHI3YNL197C RCF1Q03713 159 aa3.47□□□□□ -1.85
WHI3YNL197C IRC3Q06683 689 aa3.47□□□□□ -1.85
WHI3YNL197C YDL057WQ07379 328 aa3.47□□□□□ -1.85
WHI3YNL197C RAD52P06778 471 aaKnown RBP3.46□□□□□ -1.86
WHI3YNL197C SPB1P25582 841 aaPredicted RBP3.46□□□□□ -1.86
WHI3YNL197C YIM1P28625 365 aa3.46□□□□□ -1.86
WHI3YNL197C TUL1P36096 758 aa3.46□□□□□ -1.86
WHI3YNL197C ZIM17P42844 174 aa3.46□□□□□ -1.86
WHI3YNL197C GAT1P43574 510 aa3.46□□□□□ -1.86
WHI3YNL197C ATG27P46989 271 aa3.46□□□□□ -1.86
WHI3YNL197C YGR126WP53274 230 aa3.46□□□□□ -1.86
WHI3YNL197C BUD32P53323 261 aa3.46□□□□□ -1.86
WHI3YNL197C HEF3P53978 1044 aaKnown RBP3.46□□□□□ -1.86
WHI3YNL197C NUP100Q02629 959 aa3.46□□□□□ -1.86
WHI3YNL197C KAP120Q02932 1032 aa3.46□□□□□ -1.86
WHI3YNL197C YML133CQ03099 1374 aa3.46□□□□□ -1.86
WHI3YNL197C YLL067CQ07888 1374 aa3.46□□□□□ -1.86
WHI3YNL197C YLL066CQ99208 1374 aa3.46□□□□□ -1.86
WHI3YNL197C EDE1P34216 1381 aa3.45□□□□□ -1.86
WHI3YNL197C COR1P07256 457 aa3.45□□□□□ -1.86
WHI3YNL197C OPI1P21957 404 aa3.45□□□□□ -1.86
WHI3YNL197C CPR2P23285 205 aa3.45□□□□□ -1.86
WHI3YNL197C PPH22P23595 377 aa3.45□□□□□ -1.86
WHI3YNL197C GEX1P25596 615 aa3.45□□□□□ -1.86
WHI3YNL197C PAP1P29468 568 aaKnown RBP3.45□□□□□ -1.86
WHI3YNL197C TCM62P38228 572 aaKnown RBP3.45□□□□□ -1.86
WHI3YNL197C TIF4631P39935 952 aaKnown RBP3.45□□□□□ -1.86
WHI3YNL197C SNO3P43544 222 aa3.45□□□□□ -1.86
WHI3YNL197C YJR154WP47181 346 aa3.45□□□□□ -1.86
WHI3YNL197C CIK1Q01649 594 aa3.45□□□□□ -1.86
WHI3YNL197C VTC3Q02725 835 aa3.45□□□□□ -1.86
WHI3YNL197C ERO1Q03103 563 aa3.45□□□□□ -1.86
WHI3YNL197C ARP10Q04549 284 aa3.45□□□□□ -1.86
WHI3YNL197C PGK1P00560 416 aaKnown RBP3.45□□□□□ -1.86
WHI3YNL197C YER190C-BP0CX94 160 aa3.45□□□□□ -1.86
WHI3YNL197C YEL077W-AP0CX95 160 aa3.45□□□□□ -1.86
WHI3YNL197C YGR296C-BP0CX96 160 aa3.45□□□□□ -1.86
WHI3YNL197C YPL283W-BP0CX97 160 aa3.45□□□□□ -1.86
WHI3YNL197C YPR204C-AP0CX98 160 aa3.45□□□□□ -1.86
WHI3YNL197C CLC1P17891 233 aa3.45□□□□□ -1.86
WHI3YNL197C YME2P32843 850 aa3.45□□□□□ -1.86
WHI3YNL197C PIM1P36775 1133 aa3.45□□□□□ -1.86
WHI3YNL197C JEM1P40358 645 aa3.45□□□□□ -1.86
WHI3YNL197C CFD1P40558 293 aa3.45□□□□□ -1.86
WHI3YNL197C CAK1P43568 368 aaPredicted RBP3.45□□□□□ -1.86
WHI3YNL197C SNG1P46950 547 aa3.45□□□□□ -1.86
WHI3YNL197C FMS1P50264 508 aa3.45□□□□□ -1.86
WHI3YNL197C YGL108CP53139 140 aa3.45□□□□□ -1.86
WHI3YNL197C VPS9P54787 451 aa3.45□□□□□ -1.86
WHI3YNL197C YVH1Q02256 364 aaKnown RBP3.45□□□□□ -1.86
WHI3YNL197C YDL218WQ07629 317 aa3.45□□□□□ -1.86
WHI3YNL197C CDC45Q08032 650 aa3.45□□□□□ -1.86
WHI3YNL197C PDH1Q12428 516 aaKnown RBP3.45□□□□□ -1.86
WHI3YNL197C MDH1P17505 334 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
WHI3YNL197C DPH2P32461 534 aa3.44□□□□□ -1.86
WHI3YNL197C RRT2P38332 387 aa3.44□□□□□ -1.86
WHI3YNL197C LCB2P40970 561 aa3.44□□□□□ -1.86
WHI3YNL197C ALK1P43633 760 aaKnown RBP3.44□□□□□ -1.86
WHI3YNL197C MNP1P53163 194 aaPredicted RBP3.44□□□□□ -1.86
WHI3YNL197C ART5P53244 586 aaKnown RBP3.44□□□□□ -1.86
WHI3YNL197C SOL4P53315 255 aa3.44□□□□□ -1.86
WHI3YNL197C RPL15BP54780 204 aaPredicted RBP3.44□□□□□ -1.86
WHI3YNL197C OAZ1Q02803 292 aa3.44□□□□□ -1.86
WHI3YNL197C APL5Q08951 932 aaKnown RBP3.44□□□□□ -1.86
WHI3YNL197C SUC2P00724 532 aa3.43□□□□□ -1.86
WHI3YNL197C YAP1P19880 650 aaKnown RBP3.43□□□□□ -1.86
WHI3YNL197C REC107P21651 314 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms