RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W CBF5P33322 483 aaKnown RBP RIP-Chip data9.33□□□□□ -0.92not detected
SED1YDR077W YKL097CP34245 136 aa9.33□□□□□ -0.92
SED1YDR077W CAF4P36130 643 aa9.33□□□□□ -0.92
SED1YDR077W RPS14BP39516 138 aaKnown RBP9.33□□□□□ -0.92
SED1YDR077W HPM1P40481 377 aa9.33□□□□□ -0.92
SED1YDR077W MPS3P47069 682 aa9.33□□□□□ -0.92
SED1YDR077W DAN4P47179 1161 aa9.33□□□□□ -0.92
SED1YDR077W ATH1P48016 1211 aa9.33□□□□□ -0.92
SED1YDR077W COS6P53344 381 aa9.33□□□□□ -0.92
SED1YDR077W TGL2P54857 326 aa9.33□□□□□ -0.92
SED1YDR077W HMO1Q03973 246 aaKnown RBP9.33□□□□□ -0.92
SED1YDR077W ADF1Q2V2Q1 113 aa9.33□□□□□ -0.92
SED1YDR077W NHA1Q99271 985 aa9.33□□□□□ -0.92
SED1YDR077W CCH1P50077 2039 aa9.32□□□□□ -0.92
SED1YDR077W CET1O13297 549 aaPredicted RBP9.32□□□□□ -0.92
SED1YDR077W PHO5P00635 467 aa9.32□□□□□ -0.92
SED1YDR077W KEX2P13134 814 aa9.32□□□□□ -0.92
SED1YDR077W MEF1P25039 761 aa9.32□□□□□ -0.92
SED1YDR077W RFA2P26754 273 aaKnown RBP9.32□□□□□ -0.92
SED1YDR077W GMH1P36125 273 aa9.32□□□□□ -0.92
SED1YDR077W PIK1P39104 1066 aa9.32□□□□□ -0.92
SED1YDR077W GDH3P39708 457 aa9.32□□□□□ -0.92
SED1YDR077W SPF1P39986 1215 aaKnown RBP9.32□□□□□ -0.92
SED1YDR077W CLU1Q03690 1277 aaKnown RBP9.32□□□□□ -0.92
SED1YDR077W RPC11Q04307 110 aaPredicted RBP9.32□□□□□ -0.92
SED1YDR077W HSP31Q04432 237 aa9.32□□□□□ -0.92
SED1YDR077W ATG26Q06321 1198 aa9.32□□□□□ -0.92
SED1YDR077W NSE1Q07913 336 aa9.32□□□□□ -0.92
SED1YDR077W IOC2Q12072 812 aa9.32□□□□□ -0.92
SED1YDR077W RUP1Q12242 671 aa9.32□□□□□ -0.92
SED1YDR077W RRP42Q12277 265 aaPredicted RBP9.32□□□□□ -0.92
SED1YDR077W ATP2P00830 511 aaKnown RBP9.31□□□□□ -0.92
SED1YDR077W ATP6P00854 259 aa9.31□□□□□ -0.92
SED1YDR077W MET8P15807 274 aa9.31□□□□□ -0.92
SED1YDR077W CCA1P21269 546 aa9.31□□□□□ -0.92
SED1YDR077W YCK2P23292 546 aaKnown RBP9.31□□□□□ -0.92
SED1YDR077W PHO84P25297 587 aaKnown RBP9.31□□□□□ -0.92
SED1YDR077W RSC6P25632 483 aa9.31□□□□□ -0.92
SED1YDR077W PPZ1P26570 692 aa9.31□□□□□ -0.92
SED1YDR077W TFC1P32367 649 aa9.31□□□□□ -0.92
SED1YDR077W ATP11P32453 318 aa9.31□□□□□ -0.92
SED1YDR077W GIP1P38229 639 aa9.31□□□□□ -0.92
SED1YDR077W YHR078WP38799 552 aa9.31□□□□□ -0.92
SED1YDR077W UBA4P38820 440 aa9.31□□□□□ -0.92
SED1YDR077W LSM5P40089 93 aaKnown RBP9.31□□□□□ -0.92
SED1YDR077W SUM1P46676 1062 aa9.31□□□□□ -0.92
SED1YDR077W YPT32P51996 222 aaKnown RBP9.31□□□□□ -0.92
SED1YDR077W HST3P53687 447 aa9.31□□□□□ -0.92
SED1YDR077W ZRG17P53735 605 aa9.31□□□□□ -0.92
SED1YDR077W YNL260CP53846 198 aa9.31□□□□□ -0.92
SED1YDR077W GRS2Q06817 618 aa9.31□□□□□ -0.92
SED1YDR077W PSR1Q07800 427 aa9.31□□□□□ -0.92
SED1YDR077W SLF1Q12034 447 aaKnown RBP9.31□□□□□ -0.92
SED1YDR077W DAP1Q12091 152 aa9.31□□□□□ -0.92
SED1YDR077W RAD59Q12223 238 aa9.31□□□□□ -0.92
SED1YDR077W YDR034W-BQ6Q5X2 51 aa9.31□□□□□ -0.92
SED1YDR077W SRN2Q99176 213 aa9.31□□□□□ -0.92
SED1YDR077W HXK2P04807 486 aaKnown RBP9.3□□□□□ -0.92
SED1YDR077W POL30P15873 258 aaKnown RBP9.3□□□□□ -0.92
SED1YDR077W OCA4P25366 362 aa9.3□□□□□ -0.92
SED1YDR077W CIN8P27895 1000 aa9.3□□□□□ -0.92
SED1YDR077W SDH3P33421 198 aa9.3□□□□□ -0.92
SED1YDR077W FRE2P36033 711 aa9.3□□□□□ -0.92
SED1YDR077W FTH1P38310 465 aa9.3□□□□□ -0.92
SED1YDR077W IMA5P40884 581 aa9.3□□□□□ -0.92
SED1YDR077W STB2P46679 850 aa9.3□□□□□ -0.92
SED1YDR077W FMP33P46998 180 aa9.3□□□□□ -0.92
SED1YDR077W GTO1P48239 356 aa9.3□□□□□ -0.92
SED1YDR077W MMT1Q03218 510 aa9.3□□□□□ -0.92
SED1YDR077W ECM11Q04110 302 aa9.3□□□□□ -0.92
SED1YDR077W EMI1Q04406 187 aa9.3□□□□□ -0.92
SED1YDR077W YMR111CQ04461 462 aaPredicted RBP9.3□□□□□ -0.92
SED1YDR077W SPC2Q04969 178 aa9.3□□□□□ -0.92
SED1YDR077W ASA1Q06822 443 aa9.3□□□□□ -0.92
SED1YDR077W MUM3Q08750 479 aa9.3□□□□□ -0.92
SED1YDR077W PST1Q12355 444 aa9.3□□□□□ -0.92
SED1YDR077W AI3P03877 415 aa9.29□□□□□ -0.92
SED1YDR077W HTA2P04912 132 aa9.29□□□□□ -0.92
SED1YDR077W STE3P06783 470 aa9.29□□□□□ -0.92
SED1YDR077W SWI5P08153 709 aa9.29□□□□□ -0.92
SED1YDR077W YKR104WP0CE69 306 aa9.29□□□□□ -0.92
SED1YDR077W PHO81P17442 1178 aa9.29□□□□□ -0.92
SED1YDR077W IST2P38250 946 aa9.29□□□□□ -0.92
SED1YDR077W TAE1P38340 232 aa9.29□□□□□ -0.92
SED1YDR077W GIC1P38785 314 aa9.29□□□□□ -0.92
SED1YDR077W YVH1Q02256 364 aaKnown RBP9.29□□□□□ -0.92
SED1YDR077W ARG7Q04728 441 aa9.29□□□□□ -0.92
SED1YDR077W YDR056CQ12025 205 aa9.29□□□□□ -0.92
SED1YDR077W YCL012CQ8J0M4 134 aa9.29□□□□□ -0.92
SED1YDR077W GBP2P25555 427 aaKnown RBP RIP-Chip data9.28□□□□□ -0.92not detected
SED1YDR077W STE14P32584 239 aa9.28□□□□□ -0.92
SED1YDR077W RMA1P36001 430 aaKnown RBP9.28□□□□□ -0.92
SED1YDR077W YKL151CP36059 337 aa9.28□□□□□ -0.92
SED1YDR077W YCR087C-AP37263 153 aa9.28□□□□□ -0.92
SED1YDR077W BMT2P38278 337 aa9.28□□□□□ -0.92
SED1YDR077W PPX1P38698 397 aa9.28□□□□□ -0.92
SED1YDR077W CCT6P39079 546 aa9.28□□□□□ -0.92
SED1YDR077W YIL001WP40560 513 aa9.28□□□□□ -0.92
SED1YDR077W MEP2P41948 499 aa9.28□□□□□ -0.92
SED1YDR077W YJR149WP47177 404 aa9.28□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms