RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 LIMCH1Q9UPQ0 1083 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 SLC12A7Q9Y666 1083 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 PTPRFP10586 1907 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 CHD9Q3L8U1 2897 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 PHIPQ8WWQ0 1821 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 ZBTB43O43298 467 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 DDAH1O94760 285 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 CLTBP09497 229 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 HOXC6P09630 235 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 PTPREP23469 700 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 CYP2C19P33261 490 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 ADCYAP1R1P41586 468 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 NOVP48745 357 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 TLE2Q04725 743 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 STK3Q13188 491 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 SNX17Q15036 470 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 ME3Q16798 604 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 C1orf53Q5VUE5 145 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 APOA5Q6Q788 366 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 USP17L2Q6R6M4 530 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 SYNE3Q6ZMZ3 975 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 CATIPQ7Z7H3 387 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 DPP9Q86TI2 863 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 TMTC2Q8N394 836 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 TMX3Q96JJ7 454 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 ZSCAN31Q96LW9 406 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-228ENST00000641847 TMEM47Q9BQJ4 181 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 MYL10Q9BUA6 226 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 SH2B1Q9NRF2 756 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-228ENST00000641847 SLC5A4Q9NY91 659 aa10.94□□□□□ -0.66
PHGDH-228ENST00000641847 NID2Q14112 1375 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 TRIM43BA6NCK2 446 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 GOLGA8AA7E2F4 631 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 SEPT4O43236 478 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 PEX10O60683 326 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 EEF2P13639 858 aaKnown RBP10.93□□□□□ -0.66
PHGDH-228ENST00000641847 RXRAP19793 462 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 PDIA3P30101 505 aaKnown RBP10.93□□□□□ -0.66
PHGDH-228ENST00000641847 METAP2P50579 478 aaKnown RBP eCLIP10.93□□□□□ -0.66
PHGDH-228ENST00000641847 EVCP57679 992 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 NECAB1Q8N987 351 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 PNMA1Q8ND90 353 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 NUP133Q8WUM0 1156 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 FERMT2Q96AC1 680 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 TRIM43Q96BQ3 446 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-228ENST00000641847 ZNF274Q96GC6 653 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-228ENST00000641847 SLKQ9H2G2 1235 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-228ENST00000641847 ARHGEF10LQ9HCE6 1279 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 TMEM39AQ9NV64 488 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 FLRT1Q9NZU1 646 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 NYAP2Q9P242 653 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 CLIP2Q9UDT6 1046 aa10.93□□□□□ -0.66
PHGDH-228ENST00000641847 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 STRNO43815 780 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 PFKFB2O60825 505 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 CYBAP13498 195 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 IGFBP4P22692 258 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 RCAN1P53805 252 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 CCT2P78371 535 aaKnown RBP10.92□□□□□ -0.66
PHGDH-228ENST00000641847 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 ST3GAL1Q11201 340 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 SCRN1Q12765 414 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 GRB14Q14449 540 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 CCDC85BQ15834 202 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-228ENST00000641847 OLFML2BQ68BL8 750 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 SH3RF1Q7Z6J0 888 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 CCDC83Q8IWF9 413 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 CCDC144CPQ8IYA2 1237 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 ACER1Q8TDN7 264 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 GTF3C6Q969F1 213 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 FEZ1Q99689 392 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 SH2D4AQ9H788 454 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 MTMR7Q9Y216 660 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 LOC285556D6RIA3 1793 aa10.92□□□□□ -0.66
PHGDH-228ENST00000641847 KIAA0355O15063 1070 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 PQBP1O60828 265 aaKnown RBP10.91□□□□□ -0.66
PHGDH-228ENST00000641847 CALM1P0DP23 149 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 CALM2P0DP24 149 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 CALM3P0DP25 149 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 USP14P54578 494 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 TROAPQ12815 778 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 RTN1Q16799 776 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 POTEEQ6S8J3 1075 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 RASGRP2Q7LDG7 609 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 RNF180Q86T96 592 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 SIAH1Q8IUQ4 282 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 CTCFLQ8NI51 663 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-228ENST00000641847 MKL1Q969V6 931 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 CHMP4CQ96CF2 233 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 PRDM12Q9H4Q4 367 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 NCOA5Q9HCD5 579 aaKnown RBP10.91□□□□□ -0.66
PHGDH-228ENST00000641847 MSRAQ9UJ68 235 aa10.91□□□□□ -0.66
PHGDH-228ENST00000641847 SYNPO2Q9UMS6 1093 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms