RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 DYNLL2Q96FJ2 89 aa8.83□□□□□ -1
PHGDH-225ENST00000641720 AGBL1Q96MI9 1066 aa8.83□□□□□ -1
PHGDH-225ENST00000641720 MMP19Q99542 508 aa8.83□□□□□ -1
PHGDH-225ENST00000641720 TRIM34Q9BYJ4 488 aa8.83□□□□□ -1
PHGDH-225ENST00000641720 PPP1R12CQ9BZL4 782 aa8.83□□□□□ -1
PHGDH-225ENST00000641720 IL25Q9H293 177 aa8.83□□□□□ -1
PHGDH-225ENST00000641720 CABP5Q9NP86 173 aa8.83□□□□□ -1
PHGDH-225ENST00000641720 PPP1R9AQ9ULJ8 1098 aa8.83□□□□□ -1
PHGDH-225ENST00000641720 MROH7Q68CQ1 1323 aa8.82□□□□□ -1
PHGDH-225ENST00000641720 RFXAPO00287 272 aa8.82□□□□□ -1
PHGDH-225ENST00000641720 FOXP2O15409 715 aa8.82□□□□□ -1
PHGDH-225ENST00000641720 PRKAB2O43741 272 aa8.82□□□□□ -1
PHGDH-225ENST00000641720 GPR37L1O60883 481 aa8.82□□□□□ -1
PHGDH-225ENST00000641720 ZFYP08048 801 aaPredicted RBP8.82□□□□□ -1
PHGDH-225ENST00000641720 USP5P45974 858 aa8.82□□□□□ -1
PHGDH-225ENST00000641720 ZSCAN25Q6NSZ9 544 aa8.82□□□□□ -1
PHGDH-225ENST00000641720 TMED8Q6PL24 325 aaPredicted RBP8.82□□□□□ -1
PHGDH-225ENST00000641720 ZNF467Q7Z7K2 595 aaPredicted RBP8.82□□□□□ -1
PHGDH-225ENST00000641720 NUP133Q8WUM0 1156 aa8.82□□□□□ -1
PHGDH-225ENST00000641720 SDR42E1Q8WUS8 393 aa8.82□□□□□ -1
PHGDH-225ENST00000641720 NOC4LQ9BVI4 516 aaKnown RBP8.82□□□□□ -1
PHGDH-225ENST00000641720 SLC5A4Q9NY91 659 aa8.82□□□□□ -1
PHGDH-225ENST00000641720 CACNA1AO00555 2505 aa8.81□□□□□ -1
PHGDH-225ENST00000641720 A0A0U1RQG5 324 aaPredicted RBP8.81□□□□□ -1
PHGDH-225ENST00000641720 RBAK-RBAKDNI3L0D1 243 aa8.81□□□□□ -1
PHGDH-225ENST00000641720 ATP2A1O14983 1001 aa8.81□□□□□ -1
PHGDH-225ENST00000641720 GPAA1O43292 621 aa8.81□□□□□ -1
PHGDH-225ENST00000641720 STAT3P40763 770 aa8.81□□□□□ -1
PHGDH-225ENST00000641720 ICA1Q05084 483 aa8.81□□□□□ -1
PHGDH-225ENST00000641720 PLS1Q14651 629 aa8.81□□□□□ -1
PHGDH-225ENST00000641720 CCDC144BQ3MJ40 725 aa8.81□□□□□ -1
PHGDH-225ENST00000641720 ZNF589Q86UQ0 364 aaPredicted RBP8.81□□□□□ -1
PHGDH-225ENST00000641720 STRBPQ96SI9 672 aaKnown RBP8.81□□□□□ -1
PHGDH-225ENST00000641720 EPB41L4AQ9HCS5 686 aaPredicted RBP8.81□□□□□ -1
PHGDH-225ENST00000641720 DIAPH3Q9NSV4 1193 aa8.81□□□□□ -1
PHGDH-225ENST00000641720 GNEQ9Y223 722 aaKnown RBP8.81□□□□□ -1
PHGDH-225ENST00000641720 LAMA4Q16363 1823 aa8.81□□□□□ -1
PHGDH-225ENST00000641720 LOXHD1Q8IVV2 1947 aa8.81□□□□□ -1
PHGDH-225ENST00000641720 DNAH14Q0VDD8 3507 aa8.81□□□□□ -1
PHGDH-225ENST00000641720 DOCK5Q9H7D0 1870 aa8.81□□□□□ -1
PHGDH-225ENST00000641720 CYP2D7A0A087X1C5 515 aa8.8□□□□□ -1
PHGDH-225ENST00000641720 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.8□□□□□ -1
PHGDH-225ENST00000641720 B4GALT4O60513 344 aa8.8□□□□□ -1
PHGDH-225ENST00000641720 EEF2P13639 858 aaKnown RBP8.8□□□□□ -1
PHGDH-225ENST00000641720 IGFBP4P22692 258 aa8.8□□□□□ -1
PHGDH-225ENST00000641720 CHMLP26374 656 aa8.8□□□□□ -1
PHGDH-225ENST00000641720 ACVR2BQ13705 512 aa8.8□□□□□ -1
PHGDH-225ENST00000641720 LRRFIP1Q32MZ4 808 aaKnown RBP8.8□□□□□ -1
PHGDH-225ENST00000641720 TMEM63BQ5T3F8 832 aa8.8□□□□□ -1
PHGDH-225ENST00000641720 VPS53Q5VIR6 699 aa8.8□□□□□ -1
PHGDH-225ENST00000641720 C16orf86Q6ZW13 317 aa8.8□□□□□ -1
PHGDH-225ENST00000641720 TMEM199Q8N511 208 aa8.8□□□□□ -1
PHGDH-225ENST00000641720 GLT1D1Q96MS3 346 aa8.8□□□□□ -1
PHGDH-225ENST00000641720 CRNKL1Q9BZJ0 848 aaKnown RBP8.8□□□□□ -1
PHGDH-225ENST00000641720 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.8□□□□□ -1
PHGDH-225ENST00000641720 FAM184BQ9ULE4 1060 aa8.8□□□□□ -1
PHGDH-225ENST00000641720 PCDHA11Q9Y5I1 949 aa8.8□□□□□ -1
PHGDH-225ENST00000641720 CCDC171Q6TFL3 1326 aa8.8□□□□□ -1
PHGDH-225ENST00000641720 RIF1Q5UIP0 2472 aaKnown RBP8.79□□□□□ -1
PHGDH-225ENST00000641720 FAM186AA6NE01 2351 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 FAM86C2PA6NEL3 165 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 PI4K2BG5E9Z4 385 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 C6orf222P0C671 652 aaPredicted RBP8.79□□□□□ -1
PHGDH-225ENST00000641720 CDK8P49336 464 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 BEX3Q00994 111 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 TAP1Q03518 808 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 TTLL4Q14679 1199 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 KCTD2Q14681 263 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 TMEM31Q5JXX7 168 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 FAM83BQ5T0W9 1011 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 C12orf60Q5U649 245 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 CWC27Q6UX04 472 aaKnown RBP8.79□□□□□ -1
PHGDH-225ENST00000641720 OTOP2Q7RTS6 562 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 TICAM2Q86XR7 235 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 FAM133AQ8N9E0 248 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 PCSK9Q8NBP7 692 aaKnown RBP8.79□□□□□ -1
PHGDH-225ENST00000641720 ABHD16BQ9H3Z7 469 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 SLC28A3Q9HAS3 691 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 HELLSQ9NRZ9 838 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 MCM9Q9NXL9 1143 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 SWAP70Q9UH65 585 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 MSRAQ9UJ68 235 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 SLC4A4Q9Y6R1 1079 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 DDX49Q9Y6V7 483 aaKnown RBP8.79□□□□□ -1
PHGDH-225ENST00000641720 DMXL1Q9Y485 3027 aa8.79□□□□□ -1
PHGDH-225ENST00000641720 IGKV6D-41A0A0C4DH26 115 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 GSG1L2A8MUP6 293 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 HIP1O00291 1037 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 FGBP02675 491 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 CA3P07451 260 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 GPNMBQ14956 572 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 MCMDC2Q4G0Z9 681 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 PPP2R2DQ66LE6 453 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 CXCL17Q6UXB2 119 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 ARMCX2Q7L311 632 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 SCLYQ96I15 445 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 CTAGE1Q96RT6 745 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 NUP88Q99567 741 aaPredicted RBP8.78□□□□□ -1
PHGDH-225ENST00000641720 TEX13BQ9BXU2 312 aa8.78□□□□□ -1
PHGDH-225ENST00000641720 TRPV6Q9H1D0 765 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms