RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 PNMA6FA0A0J9YX94 578 aa19.21■□□□□ 0.67
PHGDH-211ENST00000641213 RHOBTB3O94955 611 aa19.21■□□□□ 0.67
PHGDH-211ENST00000641213 CCT6AP40227 531 aaKnown RBP19.21■□□□□ 0.67
PHGDH-211ENST00000641213 SPAG1Q07617 926 aa19.21■□□□□ 0.67
PHGDH-211ENST00000641213 SEMA3FQ13275 785 aa19.21■□□□□ 0.67
PHGDH-211ENST00000641213 TCP11X2Q5H9J9 407 aa19.21■□□□□ 0.67
PHGDH-211ENST00000641213 TOGARAM2Q6ZUX3 1019 aa19.21■□□□□ 0.67
PHGDH-211ENST00000641213 PDCL2Q8N4E4 241 aa19.21■□□□□ 0.67
PHGDH-211ENST00000641213 EHD4Q9H223 541 aa19.21■□□□□ 0.67
PHGDH-211ENST00000641213 PHLPP2Q6ZVD8 1323 aa19.21■□□□□ 0.67
PHGDH-211ENST00000641213 KCNJ18B7U540 433 aa19.21■□□□□ 0.67
PHGDH-211ENST00000641213 MPHOSPH10O00566 681 aaKnown RBP19.21■□□□□ 0.67
PHGDH-211ENST00000641213 SLURP2P0DP57 97 aa19.21■□□□□ 0.67
PHGDH-211ENST00000641213 KCNJ12Q14500 433 aa19.21■□□□□ 0.67
PHGDH-211ENST00000641213 TTBK2Q6IQ55 1244 aa19.21■□□□□ 0.67
PHGDH-211ENST00000641213 C2CD5Q86YS7 1000 aa19.21■□□□□ 0.67
PHGDH-211ENST00000641213 ITIH6Q6UXX5 1313 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 TNS1Q9HBL0 1735 aaKnown RBP19.2■□□□□ 0.66
PHGDH-211ENST00000641213 EDIL3O43854 480 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 SLU7O95391 586 aaKnown RBP19.2■□□□□ 0.66
PHGDH-211ENST00000641213 COPB1P53618 953 aaKnown RBP19.2■□□□□ 0.66
PHGDH-211ENST00000641213 KIAA0825Q8IV33 1275 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 GIMAP8Q8ND71 665 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-211ENST00000641213 MTMR9Q96QG7 549 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 MMTAG2Q9BU76 263 aaKnown RBP19.2■□□□□ 0.66
PHGDH-211ENST00000641213 MRIQ9BWK5 157 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 DNAI1Q9UI46 699 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 PCDHAC2Q9Y5I4 1007 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 TRIM49BA6NDI0 452 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 H7C1D1 291 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 N4BP3O15049 544 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 PPP1R11O60927 126 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-211ENST00000641213 CCDC93Q567U6 631 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 PPP1R18Q6NYC8 613 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 CPLX3Q8WVH0 158 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 ERO1AQ96HE7 468 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 VPS16Q9H269 839 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 DNAJC18Q9H819 358 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 RIC8AQ9NPQ8 531 aa19.2■□□□□ 0.66
PHGDH-211ENST00000641213 TXKP42681 527 aa19.19■□□□□ 0.66
PHGDH-211ENST00000641213 CACNB3P54284 484 aa19.19■□□□□ 0.66
PHGDH-211ENST00000641213 ATP2B2Q01814 1243 aa19.19■□□□□ 0.66
PHGDH-211ENST00000641213 GPATCH4Q5T3I0 446 aaKnown RBP19.19■□□□□ 0.66
PHGDH-211ENST00000641213 STRIP1Q5VSL9 837 aa19.19■□□□□ 0.66
PHGDH-211ENST00000641213 IRF2BP1Q8IU81 584 aa19.19■□□□□ 0.66
PHGDH-211ENST00000641213 ANKRD20A12PQ8NF67 263 aa19.19■□□□□ 0.66
PHGDH-211ENST00000641213 CCDC17Q96LX7 622 aa19.19■□□□□ 0.66
PHGDH-211ENST00000641213 TAB2Q9NYJ8 693 aa19.19■□□□□ 0.66
PHGDH-211ENST00000641213 GOLGA6L9A6NEM1 432 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 MFAP3LO75121 409 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 GYPCP04921 128 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 CASP14P31944 242 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 PMS1P54277 932 aaKnown RBP19.18■□□□□ 0.66
PHGDH-211ENST00000641213 FKBP1AP62942 108 aaKnown RBP19.18■□□□□ 0.66
PHGDH-211ENST00000641213 CALCRLQ16602 461 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 CCDC96Q2M329 555 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 DACT2Q5SW24 774 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 C7orf25Q9BPX7 421 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 NAA15Q9BXJ9 866 aaKnown RBP19.18■□□□□ 0.66
PHGDH-211ENST00000641213 TRIM9Q9C026 710 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 H0YIN7 160 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 FANCGO15287 622 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 SLC37A4O43826 429 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 ECE2O60344 883 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 SLC16A2P36021 539 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 TCP10Q12799 353 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 STIM1Q13586 685 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 MTF1Q14872 753 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 STYK1Q6J9G0 422 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 KCTD1Q719H9 257 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 ARID3AQ99856 593 aa19.18■□□□□ 0.66
PHGDH-211ENST00000641213 CCDC94Q9BW85 323 aaPredicted RBP19.18■□□□□ 0.66
PHGDH-211ENST00000641213 SOWAHDA6NJG2 315 aa19.17■□□□□ 0.66
PHGDH-211ENST00000641213 USP17L10C9JJH3 530 aa19.17■□□□□ 0.66
PHGDH-211ENST00000641213 TDP2O95551 362 aa19.17■□□□□ 0.66
PHGDH-211ENST00000641213 CLK2P49760 499 aaKnown RBP19.17■□□□□ 0.66
PHGDH-211ENST00000641213 FXR2P51116 673 aaKnown RBP eCLIP19.17■□□□□ 0.661e-6■■■■□ 19.3
PHGDH-211ENST00000641213 CREBRFQ8IUR6 639 aa19.17■□□□□ 0.66
PHGDH-211ENST00000641213 MTMR8Q96EF0 704 aa19.17■□□□□ 0.66
PHGDH-211ENST00000641213 CALML4Q96GE6 196 aa19.17■□□□□ 0.66
PHGDH-211ENST00000641213 DHX36Q9H2U1 1008 aaKnown RBP19.17■□□□□ 0.66
PHGDH-211ENST00000641213 FAM198AQ9UFP1 575 aa19.17■□□□□ 0.66
PHGDH-211ENST00000641213 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.17■□□□□ 0.661e-6■□□□□ 10.9
PHGDH-211ENST00000641213 RGPD3A6NKT7 1758 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-211ENST00000641213 RGPD4Q7Z3J3 1758 aa19.17■□□□□ 0.66
PHGDH-211ENST00000641213 DDTLA6NHG4 134 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-211ENST00000641213 PSMA7O14818 248 aa19.16■□□□□ 0.66
PHGDH-211ENST00000641213 ZBTB5O15062 677 aa19.16■□□□□ 0.66
PHGDH-211ENST00000641213 FXR1P51114 621 aaKnown RBP eCLIP19.16■□□□□ 0.666e-7■■■■□ 19.4
PHGDH-211ENST00000641213 HDLBPQ00341 1268 aaKnown RBP19.16■□□□□ 0.66
PHGDH-211ENST00000641213 UBE2SQ16763 222 aa19.16■□□□□ 0.66
PHGDH-211ENST00000641213 PPP4R3BQ5MIZ7 849 aa19.16■□□□□ 0.66
PHGDH-211ENST00000641213 CNGA4Q8IV77 575 aa19.16■□□□□ 0.66
PHGDH-211ENST00000641213 DESI2Q9BSY9 194 aa19.16■□□□□ 0.66
PHGDH-211ENST00000641213 IDI2Q9BXS1 227 aa19.16■□□□□ 0.66
PHGDH-211ENST00000641213 LRWD1Q9UFC0 647 aa19.16■□□□□ 0.66
PHGDH-211ENST00000641213 FAM196BA6NMK8 535 aa19.16■□□□□ 0.66
PHGDH-211ENST00000641213 RBM5P52756 815 aaKnown RBP eCLIP19.16■□□□□ 0.66
PHGDH-211ENST00000641213 GRB10Q13322 594 aa19.16■□□□□ 0.66
PHGDH-211ENST00000641213 CCDC51Q96ER9 411 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms