RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 PCDHA1Q9Y5I3 950 aa15.29■□□□□ 0.04
GTF3A-209ENST00000640289 V9GY48 417 aaPredicted RBP15.29■□□□□ 0.04
GTF3A-209ENST00000640289 SLC15A5A6NIM6 579 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 ST18O60284 1047 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 PGK2P07205 417 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 FCER1AP12319 257 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 IFNAR1P17181 557 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 CYP2B6P20813 491 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 HOXD10P28358 340 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 ADORA2AP29274 412 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 ST3GAL1Q11201 340 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 KCTD2Q14681 263 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 NSMFQ6X4W1 530 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 CLEC4DQ8WXI8 215 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 USP6NLQ92738 828 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 NUDT12Q9BQG2 462 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 FBXO40Q9UH90 709 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 PTPN22Q9Y2R2 807 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 PTCH2Q9Y6C5 1203 aa15.28■□□□□ 0.04
GTF3A-209ENST00000640289 ABCB11O95342 1321 aa15.27■□□□□ 0.04
GTF3A-209ENST00000640289 CPLX1O14810 134 aa15.27■□□□□ 0.04
GTF3A-209ENST00000640289 STRNO43815 780 aa15.27■□□□□ 0.04
GTF3A-209ENST00000640289 COBLO75128 1261 aa15.27■□□□□ 0.04
GTF3A-209ENST00000640289 MAP2K5Q13163 448 aa15.27■□□□□ 0.04
GTF3A-209ENST00000640289 COL13A1Q5TAT6 717 aaPredicted RBP15.27■□□□□ 0.04
GTF3A-209ENST00000640289 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.27■□□□□ 0.04
GTF3A-209ENST00000640289 ANKRD35Q8N283 1001 aa15.27■□□□□ 0.04
GTF3A-209ENST00000640289 SOCS4Q8WXH5 440 aa15.27■□□□□ 0.04
GTF3A-209ENST00000640289 TBC1D5Q92609 795 aa15.27■□□□□ 0.04
GTF3A-209ENST00000640289 GPKOWQ92917 476 aaPredicted RBP eCLIP15.27■□□□□ 0.04
GTF3A-209ENST00000640289 GTF3C6Q969F1 213 aa15.27■□□□□ 0.04
GTF3A-209ENST00000640289 SLC26A6Q9BXS9 759 aa15.27■□□□□ 0.04
GTF3A-209ENST00000640289 A1CFQ9NQ94 594 aaKnown RBP15.27■□□□□ 0.04
GTF3A-209ENST00000640289 PNMA2Q9UL42 364 aa15.27■□□□□ 0.04
GTF3A-209ENST00000640289 OPLAHO14841 1288 aa15.26■□□□□ 0.03
GTF3A-209ENST00000640289 PRPF3O43395 683 aaKnown RBP15.26■□□□□ 0.03
GTF3A-209ENST00000640289 CTDNEP1O95476 244 aa15.26■□□□□ 0.03
GTF3A-209ENST00000640289 RGS2P41220 211 aa15.26■□□□□ 0.03
GTF3A-209ENST00000640289 WWC2Q6AWC2 1192 aa15.26■□□□□ 0.03
GTF3A-209ENST00000640289 ABRAQ8N0Z2 381 aa15.26■□□□□ 0.03
GTF3A-209ENST00000640289 NPLOC4Q8TAT6 608 aa15.26■□□□□ 0.03
GTF3A-209ENST00000640289 RAET1EQ8TD07 263 aa15.26■□□□□ 0.03
GTF3A-209ENST00000640289 DDX11Q96FC9 970 aa15.26■□□□□ 0.03
GTF3A-209ENST00000640289 MRPL11Q9Y3B7 192 aaKnown RBP15.26■□□□□ 0.03
GTF3A-209ENST00000640289 MGAMO43451 1857 aa15.25■□□□□ 0.03
GTF3A-209ENST00000640289 PTPDC1A2A3K4 754 aa15.25■□□□□ 0.03
GTF3A-209ENST00000640289 PRMT2P55345 433 aa15.25■□□□□ 0.03
GTF3A-209ENST00000640289 CNTN2Q02246 1040 aa15.25■□□□□ 0.03
GTF3A-209ENST00000640289 SSRP1Q08945 709 aaKnown RBP15.25■□□□□ 0.03
GTF3A-209ENST00000640289 BAATQ14032 418 aaPredicted RBP15.25■□□□□ 0.03
GTF3A-209ENST00000640289 PKN1Q16512 942 aa15.25■□□□□ 0.03
GTF3A-209ENST00000640289 CCL14Q16627 93 aa15.25■□□□□ 0.03
GTF3A-209ENST00000640289 TYW1BQ6NUM6 668 aa15.25■□□□□ 0.03
GTF3A-209ENST00000640289 SLC30A10Q6XR72 485 aa15.25■□□□□ 0.03
GTF3A-209ENST00000640289 HEATR3Q7Z4Q2 680 aa15.25■□□□□ 0.03
GTF3A-209ENST00000640289 DPP9Q86TI2 863 aa15.25■□□□□ 0.03
GTF3A-209ENST00000640289 CCDC83Q8IWF9 413 aa15.25■□□□□ 0.03
GTF3A-209ENST00000640289 ZSCAN31Q96LW9 406 aaPredicted RBP15.25■□□□□ 0.03
GTF3A-209ENST00000640289 PURBQ96QR8 312 aaKnown RBP15.25■□□□□ 0.03
GTF3A-209ENST00000640289 APBA2Q99767 749 aa15.25■□□□□ 0.03
GTF3A-209ENST00000640289 RNF26Q9BY78 433 aaPredicted RBP15.25■□□□□ 0.03
GTF3A-209ENST00000640289 MCOLN1Q9GZU1 580 aa15.25■□□□□ 0.03
GTF3A-209ENST00000640289 CYP39A1Q9NYL5 469 aa15.25■□□□□ 0.03
GTF3A-209ENST00000640289 ELNP15502 786 aa15.24■□□□□ 0.03
GTF3A-209ENST00000640289 AKAP17AQ02040 695 aaKnown RBP15.24■□□□□ 0.03
GTF3A-209ENST00000640289 IRF5Q13568 498 aa15.24■□□□□ 0.03
GTF3A-209ENST00000640289 PFKFB3Q16875 520 aaPredicted RBP15.24■□□□□ 0.03
GTF3A-209ENST00000640289 ZNF792Q3KQV3 632 aa15.24■□□□□ 0.03
GTF3A-209ENST00000640289 FBXO46Q6PJ61 603 aaPredicted RBP15.24■□□□□ 0.03
GTF3A-209ENST00000640289 CPLX2Q6PUV4 134 aaKnown RBP15.24■□□□□ 0.03
GTF3A-209ENST00000640289 RNF207Q6ZRF8 634 aa15.24■□□□□ 0.03
GTF3A-209ENST00000640289 SH2B1Q9NRF2 756 aaPredicted RBP15.24■□□□□ 0.03
GTF3A-209ENST00000640289 FLRT1Q9NZU1 646 aa15.24■□□□□ 0.03
GTF3A-209ENST00000640289 PLXNB2O15031 1838 aa15.24■□□□□ 0.03
GTF3A-209ENST00000640289 PFASO15067 1338 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 DNAJC25-GNG10A0A024R161 153 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 STXBP3O00186 592 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 ADCY3O60266 1144 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 JAK2O60674 1132 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 CDKL5O76039 1030 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 CFBP00751 764 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 HOXC6P09630 235 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 SCG2P13521 617 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 CALML3P27482 149 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 RPS6P62753 249 aaKnown RBP15.23■□□□□ 0.03
GTF3A-209ENST00000640289 TRAF1Q13077 416 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 PKN2Q16513 984 aaKnown RBP15.23■□□□□ 0.03
GTF3A-209ENST00000640289 TRIM22Q8IYM9 498 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 NSUN7Q8NE18 718 aaKnown RBP15.23■□□□□ 0.03
GTF3A-209ENST00000640289 IL27Q8NEV9 243 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 TRIB2Q92519 343 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 TMX3Q96JJ7 454 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 FGD4Q96M96 766 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 AIFM3Q96NN9 605 aa15.23■□□□□ 0.03
GTF3A-209ENST00000640289 POTEB2H3BUK9 544 aa15.22■□□□□ 0.03
GTF3A-209ENST00000640289 XRCC5P13010 732 aaKnown RBP15.22■□□□□ 0.03
GTF3A-209ENST00000640289 HOXA13P31271 388 aaPredicted RBP15.22■□□□□ 0.03
GTF3A-209ENST00000640289 GRK4P32298 578 aa15.22■□□□□ 0.03
GTF3A-209ENST00000640289 NAPAP54920 295 aa15.22■□□□□ 0.03
GTF3A-209ENST00000640289 TRIM32Q13049 653 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms