RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 UBE4AQ14139 1066 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 KCNA10Q16322 511 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 COLEC12Q5KU26 742 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 CNKSR3Q6P9H4 555 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 TMEM184AQ6ZMB5 413 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 EP400NLQ6ZTU2 488 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 MAML2Q8IZL2 1156 aaPredicted RBP4.53□□□□□ -1.68
CCDC7-213ENST00000639290 FLCNQ8NFG4 579 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 IER2Q9BTL4 223 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 SEMA4GQ9NTN9 838 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 DLGAP2Q9P1A6 1054 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 PCDHGA4Q9Y5G9 962 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 LRRFIP2Q9Y608 721 aaKnown RBP4.53□□□□□ -1.68
CCDC7-213ENST00000639290 CNOT1A5YKK6 2376 aaKnown RBP4.53□□□□□ -1.68
CCDC7-213ENST00000639290 NLRC5Q86WI3 1866 aa4.53□□□□□ -1.68
CCDC7-213ENST00000639290 ENTPD3O75355 529 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 MMP1P03956 469 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 DLX2Q07687 328 aaPredicted RBP4.52□□□□□ -1.69
CCDC7-213ENST00000639290 SMYD5Q6GMV2 418 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 DPP9Q86TI2 863 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 CCDC155Q8N6L0 562 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 RPGRIP1Q96KN7 1286 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 PLVAPQ9BX97 442 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 OSBPL6Q9BZF3 934 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 FAM184BQ9ULE4 1060 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 DUSP12Q9UNI6 340 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 USTQ9Y2C2 406 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 KIF16BQ96L93 1317 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 RFX7Q2KHR2 1363 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 SEMA3EO15041 775 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 NUDT7P0C024 238 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 ELAVL4P26378 380 aaKnown RBP4.52□□□□□ -1.69
CCDC7-213ENST00000639290 NRLP54845 237 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 PTPN11Q06124 597 aaPredicted RBP4.52□□□□□ -1.69
CCDC7-213ENST00000639290 MIGA2Q7L4E1 593 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 LIN37Q96GY3 246 aaPredicted RBP4.52□□□□□ -1.69
CCDC7-213ENST00000639290 TANGO6Q9C0B7 1094 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 INCENPQ9NQS7 918 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.52□□□□□ -1.69
CCDC7-213ENST00000639290 DNAH14Q0VDD8 3507 aa4.52□□□□□ -1.69
CCDC7-213ENST00000639290 F8W031 263 aaPredicted RBP4.51□□□□□ -1.69
CCDC7-213ENST00000639290 PI15O43692 258 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 HOXB8P17481 243 aaPredicted RBP4.51□□□□□ -1.69
CCDC7-213ENST00000639290 CCL23P55773 120 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 BFSP2Q13515 415 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 C19orf48Q6RUI8 117 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 FBXO11Q86XK2 927 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 SLF2Q8IX21 1173 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 SCUBE3Q8IX30 993 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 TMEM192Q8IY95 271 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 CARD14Q9BXL6 1004 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 SEC31BQ9NQW1 1179 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 ATAD5Q96QE3 1844 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 LOC105371045A0A1W2PR82 267 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 ZEB2O60315 1214 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 PPP1R37O75864 691 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 PGK1P00558 417 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 ASGR1P07306 291 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 ZNF865P0CJ78 1059 aaPredicted RBP4.51□□□□□ -1.69
CCDC7-213ENST00000639290 CEACAM1P13688 526 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 SMPD1P17405 629 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 CNR2P34972 360 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 PLCD1P51178 756 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 LSM11P83369 360 aaKnown RBP eCLIP4.51□□□□□ -1.69
CCDC7-213ENST00000639290 FOXK1P85037 733 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 ZNF252P-AS1Q0IIN9 211 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 CLUL1Q15846 466 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 PROSER3Q2NL68 480 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 TXNRD3Q86VQ6 643 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 RETREG2Q8NC44 543 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 ATP8B4Q8TF62 1192 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 LOXL4Q96JB6 756 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 MAML3Q96JK9 1138 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 MROH8Q9H579 483 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 RRP7AQ9Y3A4 280 aaKnown RBP4.51□□□□□ -1.69
CCDC7-213ENST00000639290 MYH3P11055 1940 aa4.51□□□□□ -1.69
CCDC7-213ENST00000639290 UMODL1Q5DID0 1318 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 USP17L5A8MUK1 530 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 CNMDO75829 334 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 CXCL10P02778 98 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 CFHP08603 1231 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 RDXP35241 583 aaKnown RBP4.5□□□□□ -1.69
CCDC7-213ENST00000639290 CFHR1Q03591 330 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 RBL2Q08999 1139 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 FOXC1Q12948 553 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 FLIIQ13045 1269 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 Q3C1V9 767 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 MFSD14BQ5SR56 506 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 C12orf42Q96LP6 360 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 C17orf80Q9BSJ5 609 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 SCNM1Q9BWG6 230 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 KDM4CQ9H3R0 1056 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 GPHNQ9NQX3 736 aaPredicted RBP4.5□□□□□ -1.69
CCDC7-213ENST00000639290 WDR87Q6ZQQ6 2873 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 A0A087WV48 116 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 PCCAP05165 728 aaPredicted RBP4.5□□□□□ -1.69
CCDC7-213ENST00000639290 ADORA2AP29274 412 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 COPB2P35606 906 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 NONOQ15233 471 aaKnown RBP eCLIP4.5□□□□□ -1.69
CCDC7-213ENST00000639290 E2F4Q16254 413 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms