RNA–Protein interactions for RNA: ENST00000638692.1

PTPRVP-203, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 1,189 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-203ENST00000638692 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.26■□□□□ 0.83
PTPRVP-203ENST00000638692 HMX1Q9NP08 348 aaPredicted RBP20.26■□□□□ 0.83
PTPRVP-203ENST00000638692 SLC5A4Q9NY91 659 aa20.26■□□□□ 0.83
PTPRVP-203ENST00000638692 PPP1R11O60927 126 aaPredicted RBP20.25■□□□□ 0.83
PTPRVP-203ENST00000638692 GJA8P48165 433 aa20.25■□□□□ 0.83
PTPRVP-203ENST00000638692 CNTN2Q02246 1040 aa20.25■□□□□ 0.83
PTPRVP-203ENST00000638692 USH1GQ495M9 461 aa20.25■□□□□ 0.83
PTPRVP-203ENST00000638692 MFSD14CQ5VZR4 134 aa20.25■□□□□ 0.83
PTPRVP-203ENST00000638692 BLOC1S2Q6QNY1 142 aa20.25■□□□□ 0.83
PTPRVP-203ENST00000638692 FAM133AQ8N9E0 248 aa20.25■□□□□ 0.83
PTPRVP-203ENST00000638692 CYP39A1Q9NYL5 469 aa20.25■□□□□ 0.83
PTPRVP-203ENST00000638692 SOWAHBA6NEL2 793 aa20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 DHX16O60231 1041 aaKnown RBP20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 CASTP20810 708 aaKnown RBP20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 RPS6KB1P23443 525 aa20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 C8orf34Q49A92 452 aa20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 PRAMEF19Q5SWL8 479 aa20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 APOA5Q6Q788 366 aa20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 Q6ZUG5 572 aa20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 CCDC144CPQ8IYA2 1237 aa20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 U2AF1L4Q8WU68 220 aaKnown RBP20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 DEFB118Q96PH6 123 aa20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 PURBQ96QR8 312 aaKnown RBP20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 ZSWIM6Q9HCJ5 1215 aa20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 SLC12A7Q9Y666 1083 aa20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 ASTN1O14525 1302 aa20.24■□□□□ 0.83
PTPRVP-203ENST00000638692 PLEKHA8P1O95397 391 aa20.23■□□□□ 0.83
PTPRVP-203ENST00000638692 SGPL1O95470 568 aa20.23■□□□□ 0.83
PTPRVP-203ENST00000638692 CYBAP13498 195 aa20.23■□□□□ 0.83
PTPRVP-203ENST00000638692 MAMDC4Q6UXC1 1216 aa20.23■□□□□ 0.83
PTPRVP-203ENST00000638692 NSMFQ6X4W1 530 aa20.23■□□□□ 0.83
PTPRVP-203ENST00000638692 SRBD1Q8N5C6 995 aaKnown RBP20.23■□□□□ 0.83
PTPRVP-203ENST00000638692 FANCBQ8NB91 859 aa20.23■□□□□ 0.83
PTPRVP-203ENST00000638692 CTCFLQ8NI51 663 aaPredicted RBP20.23■□□□□ 0.83
PTPRVP-203ENST00000638692 PIGSQ96S52 555 aa20.23■□□□□ 0.83
PTPRVP-203ENST00000638692 TINF2Q9BSI4 451 aa20.23■□□□□ 0.83
PTPRVP-203ENST00000638692 AGXT2Q9BYV1 514 aa20.23■□□□□ 0.83
PTPRVP-203ENST00000638692 CRISPLD2Q9H0B8 497 aa20.23■□□□□ 0.83
PTPRVP-203ENST00000638692 PNMA2Q9UL42 364 aa20.23■□□□□ 0.83
PTPRVP-203ENST00000638692 PFASO15067 1338 aa20.23■□□□□ 0.83
PTPRVP-203ENST00000638692 ZBTB5O15062 677 aa20.22■□□□□ 0.83
PTPRVP-203ENST00000638692 SNAI1O95863 264 aaPredicted RBP20.22■□□□□ 0.83
PTPRVP-203ENST00000638692 CALM1P0DP23 149 aa20.22■□□□□ 0.83
PTPRVP-203ENST00000638692 CALM2P0DP24 149 aa20.22■□□□□ 0.83
PTPRVP-203ENST00000638692 CALM3P0DP25 149 aa20.22■□□□□ 0.83
PTPRVP-203ENST00000638692 PSMA5P28066 241 aa20.22■□□□□ 0.83
PTPRVP-203ENST00000638692 BAATQ14032 418 aaPredicted RBP20.22■□□□□ 0.83
PTPRVP-203ENST00000638692 LHX8Q68G74 356 aa20.22■□□□□ 0.83
PTPRVP-203ENST00000638692 ZNF467Q7Z7K2 595 aaPredicted RBP20.22■□□□□ 0.83
PTPRVP-203ENST00000638692 MICU3Q86XE3 530 aa20.22■□□□□ 0.83
PTPRVP-203ENST00000638692 FBXO11Q86XK2 927 aa20.22■□□□□ 0.83
PTPRVP-203ENST00000638692 CMTR1Q8N1G2 835 aaKnown RBP20.22■□□□□ 0.83
PTPRVP-203ENST00000638692 FBXL16Q8N461 479 aa20.22■□□□□ 0.83
PTPRVP-203ENST00000638692 TBC1D5Q92609 795 aa20.22■□□□□ 0.83
PTPRVP-203ENST00000638692 POTEB2H3BUK9 544 aa20.21■□□□□ 0.83
PTPRVP-203ENST00000638692 KIF5BP33176 963 aa20.21■□□□□ 0.83
PTPRVP-203ENST00000638692 APOBRQ0VD83 1088 aa20.21■□□□□ 0.83
PTPRVP-203ENST00000638692 SLC30A10Q6XR72 485 aa20.21■□□□□ 0.83
PTPRVP-203ENST00000638692 RUFY3Q7L099 469 aa20.21■□□□□ 0.83
PTPRVP-203ENST00000638692 HOMER1Q86YM7 354 aa20.21■□□□□ 0.83
PTPRVP-203ENST00000638692 SPZ1Q9BXG8 430 aa20.21■□□□□ 0.83
PTPRVP-203ENST00000638692 TM6SF1Q9BZW5 370 aa20.21■□□□□ 0.83
PTPRVP-203ENST00000638692 DDX49Q9Y6V7 483 aaKnown RBP20.21■□□□□ 0.83
PTPRVP-203ENST00000638692 LRRC37A2A6NM11 1700 aa20.21■□□□□ 0.83
PTPRVP-203ENST00000638692 ABCB11O95342 1321 aa20.21■□□□□ 0.83
PTPRVP-203ENST00000638692 KLF18A0A0U1RQI7 1052 aa20.2■□□□□ 0.82
PTPRVP-203ENST00000638692 OPLAHO14841 1288 aa20.2■□□□□ 0.82
PTPRVP-203ENST00000638692 SMARCA1P28370 1054 aa20.2■□□□□ 0.82
PTPRVP-203ENST00000638692 MSL3Q8N5Y2 521 aaKnown RBP20.2■□□□□ 0.82
PTPRVP-203ENST00000638692 BRF1Q92994 677 aa20.2■□□□□ 0.82
PTPRVP-203ENST00000638692 AMNQ9BXJ7 453 aa20.2■□□□□ 0.82
PTPRVP-203ENST00000638692 FAM217BQ9NTX9 383 aaPredicted RBP20.2■□□□□ 0.82
PTPRVP-203ENST00000638692 PNMA6FA0A0J9YX94 578 aa20.19■□□□□ 0.82
PTPRVP-203ENST00000638692 PTPDC1A2A3K4 754 aa20.19■□□□□ 0.82
PTPRVP-203ENST00000638692 ZBTB43O43298 467 aa20.19■□□□□ 0.82
PTPRVP-203ENST00000638692 ZNF865P0CJ78 1059 aaPredicted RBP20.19■□□□□ 0.82
PTPRVP-203ENST00000638692 GNAQP50148 359 aa20.19■□□□□ 0.82
PTPRVP-203ENST00000638692 RPS6P62753 249 aaKnown RBP20.19■□□□□ 0.82
PTPRVP-203ENST00000638692 TOB2Q14106 344 aaPredicted RBP20.19■□□□□ 0.82
PTPRVP-203ENST00000638692 RNF207Q6ZRF8 634 aa20.19■□□□□ 0.82
PTPRVP-203ENST00000638692 TMTC3Q6ZXV5 915 aa20.19■□□□□ 0.82
PTPRVP-203ENST00000638692 RGS22Q8NE09 1264 aa20.19■□□□□ 0.82
PTPRVP-203ENST00000638692 PIBF1Q8WXW3 757 aa20.19■□□□□ 0.82
PTPRVP-203ENST00000638692 UPF3BQ9BZI7 483 aaKnown RBP20.19■□□□□ 0.82
PTPRVP-203ENST00000638692 GTF3C3Q9Y5Q9 886 aa20.19■□□□□ 0.82
PTPRVP-203ENST00000638692 SYNGAP1Q96PV0 1343 aa20.19■□□□□ 0.82
PTPRVP-203ENST00000638692 TFRCP02786 760 aaKnown RBP20.18■□□□□ 0.82
PTPRVP-203ENST00000638692 CNGA1P29973 690 aa20.18■□□□□ 0.82
PTPRVP-203ENST00000638692 MNX1P50219 401 aaPredicted RBP20.18■□□□□ 0.82
PTPRVP-203ENST00000638692 FGD1P98174 961 aa20.18■□□□□ 0.82
PTPRVP-203ENST00000638692 SYNE3Q6ZMZ3 975 aa20.18■□□□□ 0.82
PTPRVP-203ENST00000638692 ARMCX2Q7L311 632 aa20.18■□□□□ 0.82
PTPRVP-203ENST00000638692 UBE2Q1Q7Z7E8 422 aa20.18■□□□□ 0.82
PTPRVP-203ENST00000638692 CCDC82Q8N4S0 544 aa20.18■□□□□ 0.82
PTPRVP-203ENST00000638692 IL17RAQ96F46 866 aa20.18■□□□□ 0.82
PTPRVP-203ENST00000638692 LZTS2Q9BRK4 669 aa20.18■□□□□ 0.82
PTPRVP-203ENST00000638692 KATNBL1Q9H079 304 aa20.18■□□□□ 0.82
PTPRVP-203ENST00000638692 OGDHLQ9ULD0 1010 aa20.18■□□□□ 0.82
PTPRVP-203ENST00000638692 PCDHA1Q9Y5I3 950 aa20.18■□□□□ 0.82
PTPRVP-203ENST00000638692 CYP46A1Q9Y6A2 500 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms