RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 SAMSN1Q9NSI8 373 aaKnown RBP13.49□□□□□ -0.25
GFAP-228ENST00000638488 ANO9A1A5B4 782 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 ZMYND10O75800 440 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 MARCKSP29966 332 aaPredicted RBP13.49□□□□□ -0.25
GFAP-228ENST00000638488 SARSP49591 514 aaKnown RBP13.49□□□□□ -0.25
GFAP-228ENST00000638488 LONRF3Q496Y0 759 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 MICU3Q86XE3 530 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 IFNL3Q8IZI9 196 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 PARD3BQ8TEW8 1205 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 RNPC3Q96LT9 517 aaKnown RBP13.49□□□□□ -0.25
GFAP-228ENST00000638488 MYL10Q9BUA6 226 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 EPB41L4AQ9HCS5 686 aaPredicted RBP13.49□□□□□ -0.25
GFAP-228ENST00000638488 HPS5Q9UPZ3 1129 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 COL4A1P02462 1669 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 GNPATO15228 680 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 SKAP2O75563 359 aaPredicted RBP13.48□□□□□ -0.25
GFAP-228ENST00000638488 HDLBPQ00341 1268 aaKnown RBP13.48□□□□□ -0.25
GFAP-228ENST00000638488 ANKRD20A8PQ5CZ79 823 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 SPECC1Q5M775 1068 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 VPS37DQ86XT2 251 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 LCORLQ8N3X6 602 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 CPLX3Q8WVH0 158 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 ABHD10Q9NUJ1 306 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 KCNH3Q9ULD8 1083 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 DDX60Q8IY21 1712 aaKnown RBP13.48□□□□□ -0.25
GFAP-228ENST00000638488 AP1G2O75843 785 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 DNAJC8O75937 253 aaPredicted RBP13.48□□□□□ -0.25
GFAP-228ENST00000638488 ATP1A1P05023 1023 aaKnown RBP13.48□□□□□ -0.25
GFAP-228ENST00000638488 IBSPP21815 317 aaPredicted RBP13.48□□□□□ -0.25
GFAP-228ENST00000638488 RAB27AP51159 221 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 PTPAQ15257 358 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 CAPRIN2Q6IMN6 1127 aaKnown RBP13.48□□□□□ -0.25
GFAP-228ENST00000638488 ZNF572Q7Z3I7 529 aaPredicted RBP13.48□□□□□ -0.25
GFAP-228ENST00000638488 CCHCR1Q8TD31 782 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 ZKSCAN3Q9BRR0 538 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 TMX4Q9H1E5 349 aaPredicted RBP13.48□□□□□ -0.25
GFAP-228ENST00000638488 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.48□□□□□ -0.25
GFAP-228ENST00000638488 HAUS2Q9NVX0 235 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 SLC4A4Q9Y6R1 1079 aa13.48□□□□□ -0.25
GFAP-228ENST00000638488 KIF28PB7ZC32 967 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 PPP1R12BO60237 982 aaPredicted RBP13.47□□□□□ -0.25
GFAP-228ENST00000638488 MDH1P40925 334 aaKnown RBP13.47□□□□□ -0.25
GFAP-228ENST00000638488 FXR1P51114 621 aaKnown RBP eCLIP13.47□□□□□ -0.25
GFAP-228ENST00000638488 POSTNQ15063 836 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 PPP4R3AQ6IN85 833 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 CD302Q8IX05 232 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 TRMT44Q8IYL2 757 aaKnown RBP13.47□□□□□ -0.25
GFAP-228ENST00000638488 CAGE1Q8TC20 777 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 CELF1Q92879 486 aaKnown RBP13.47□□□□□ -0.25
GFAP-228ENST00000638488 JAKMIP2Q96AA8 810 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 RRP36Q96EU6 259 aaKnown RBP13.47□□□□□ -0.25
GFAP-228ENST00000638488 PAIP2Q9BPZ3 127 aaKnown RBP13.47□□□□□ -0.25
GFAP-228ENST00000638488 CORO1CQ9ULV4 474 aaPredicted RBP13.47□□□□□ -0.25
GFAP-228ENST00000638488 ANGEL1Q9UNK9 670 aaKnown RBP13.47□□□□□ -0.25
GFAP-228ENST00000638488 TAF1P21675 1872 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 LRP5O75197 1615 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 ERICH2A1L162 156 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 AHCYL1O43865 530 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 FESP07332 822 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 RPSAP08865 295 aaKnown RBP13.47□□□□□ -0.25
GFAP-228ENST00000638488 NR1D1P20393 614 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 METAP2P50579 478 aaKnown RBP eCLIP13.47□□□□□ -0.25
GFAP-228ENST00000638488 KCNB1Q14721 858 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 SPATA1Q5VX52 437 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 DRAXINQ8NBI3 349 aaPredicted RBP13.47□□□□□ -0.25
GFAP-228ENST00000638488 CYFIP2Q96F07 1278 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 SPAG5Q96R06 1193 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 MED15Q96RN5 788 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 SLC39A2Q9NP94 309 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 HDAC6Q9UBN7 1215 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 USP21Q9UK80 565 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 TRPC6Q9Y210 931 aa13.47□□□□□ -0.25
GFAP-228ENST00000638488 SMNDC1O75940 238 aaKnown RBP eCLIP13.46□□□□□ -0.25
GFAP-228ENST00000638488 GHRP10912 638 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 ATP1A2P50993 1020 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 VPS72Q15906 364 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 GLE1Q53GS7 698 aaKnown RBP13.46□□□□□ -0.25
GFAP-228ENST00000638488 CDKAL1Q5VV42 579 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 MIS18BP1Q6P0N0 1132 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 BZW1Q7L1Q6 419 aaKnown RBP13.46□□□□□ -0.25
GFAP-228ENST00000638488 KIRREL3Q8IZU9 778 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 SDR42E1Q8WUS8 393 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 PHKBQ93100 1093 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 AIFM3Q96NN9 605 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 OSBPL9Q96SU4 736 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 IRAK4Q9NWZ3 460 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 GUCA1BQ9UMX6 200 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 ATRNO75882 1429 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 ATP6V1G2O95670 118 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 CYP7A1P22680 504 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 GUCY1A3Q02108 690 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 TMEM67Q5HYA8 995 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 CLEC4GQ6UXB4 293 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 ARMC9Q7Z3E5 817 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 FNBP4Q8N3X1 1017 aaPredicted RBP13.46□□□□□ -0.25
GFAP-228ENST00000638488 TSEN2Q8NCE0 465 aaKnown RBP13.46□□□□□ -0.25
GFAP-228ENST00000638488 SPDYE1Q8NFV5 336 aaPredicted RBP13.46□□□□□ -0.25
GFAP-228ENST00000638488 CUL5Q93034 780 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 ZBTB10Q96DT7 871 aa13.46□□□□□ -0.25
GFAP-228ENST00000638488 SLF1Q9BQI6 1058 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms