RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 TNIP1Q15025 636 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 DPCR1Q3MIW9 517 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 PRAMEF18Q5VWM3 479 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 FAM200AQ8TCP9 573 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 SYMPKQ92797 1274 aaKnown RBP11.26□□□□□ -0.61
ATM-226ENST00000638443 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
ATM-226ENST00000638443 CEP131Q9UPN4 1083 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 FAM237AA0A1B0GTK4 181 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 PRR29P0C7W0 189 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 SMARCA1P28370 1054 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 CCDC173Q0VFZ6 552 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 QRICH1Q2TAL8 776 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 GPATCH4Q5T3I0 446 aaKnown RBP11.26□□□□□ -0.61
ATM-226ENST00000638443 ARHGAP27Q6ZUM4 889 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 TRPM4Q8TD43 1214 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 TEPSINQ96N21 525 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 HACL1Q9UJ83 578 aa11.26□□□□□ -0.61
ATM-226ENST00000638443 PP2D1A8MPX8 630 aa11.25□□□□□ -0.61
ATM-226ENST00000638443 CTAGE5O15320 804 aa11.25□□□□□ -0.61
ATM-226ENST00000638443 CASP1P29466 404 aa11.25□□□□□ -0.61
ATM-226ENST00000638443 CDC37Q16543 378 aaPredicted RBP11.25□□□□□ -0.61
ATM-226ENST00000638443 KIF4BQ2VIQ3 1234 aa11.25□□□□□ -0.61
ATM-226ENST00000638443 LETM2Q2VYF4 491 aa11.25□□□□□ -0.61
ATM-226ENST00000638443 KRBA2Q6ZNG9 492 aa11.25□□□□□ -0.61
ATM-226ENST00000638443 FAM83AQ86UY5 434 aa11.25□□□□□ -0.61
ATM-226ENST00000638443 REXO1Q8N1G1 1221 aaKnown RBP11.25□□□□□ -0.61
ATM-226ENST00000638443 C4orf32Q8N8J7 132 aa11.25□□□□□ -0.61
ATM-226ENST00000638443 PDLIM2Q96JY6 352 aa11.25□□□□□ -0.61
ATM-226ENST00000638443 PPP1R9BQ96SB3 815 aa11.25□□□□□ -0.61
ATM-226ENST00000638443 SPON1Q9HCB6 807 aa11.25□□□□□ -0.61
ATM-226ENST00000638443 KIAA1468Q9P260 1216 aa11.25□□□□□ -0.61
ATM-226ENST00000638443 SERTAD1Q9UHV2 236 aa11.25□□□□□ -0.61
ATM-226ENST00000638443 PNMA6FA0A0J9YX94 578 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 TMEM232C9JQI7 657 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 ZBTB5O15062 677 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 ZNF165P49910 485 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 IKQ13123 557 aaPredicted RBP11.24□□□□□ -0.61
ATM-226ENST00000638443 STX1AQ16623 288 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 FKBP1CQ5VVH2 108 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 PARP9Q8IXQ6 854 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 CNNM3Q8NE01 707 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 TBCKQ8TEA7 893 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 DCAF4Q8WV16 495 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 DHX58Q96C10 678 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 MTMR8Q96EF0 704 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 C6orf50Q9HD87 102 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 ACTN4O43707 911 aaKnown RBP11.24□□□□□ -0.61
ATM-226ENST00000638443 EDIL3O43854 480 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 CAP2P40123 477 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 TRAPPC10P48553 1259 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 ADCY7P51828 1080 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 USH1GQ495M9 461 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 DLK2Q6UY11 383 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 GMCL1P1Q8NEA9 526 aa11.24□□□□□ -0.61
ATM-226ENST00000638443 CCDC12Q8WUD4 166 aaPredicted RBP11.24□□□□□ -0.61
ATM-226ENST00000638443 ANP32BQ92688 251 aaKnown RBP11.24□□□□□ -0.61
ATM-226ENST00000638443 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 CCNT1O60563 726 aaKnown RBP11.23□□□□□ -0.61
ATM-226ENST00000638443 RPS12P25398 132 aaKnown RBP11.23□□□□□ -0.61
ATM-226ENST00000638443 GNA11P29992 359 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 NONOQ15233 471 aaKnown RBP eCLIP11.23□□□□□ -0.61
ATM-226ENST00000638443 FAM83BQ5T0W9 1011 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 USP17L6PQ6QN14 398 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 POTEDQ86YR6 584 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 ZNF579Q8NAF0 562 aaKnown RBP11.23□□□□□ -0.61
ATM-226ENST00000638443 STAMQ92783 540 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 FAM13BQ9NYF5 915 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 ESYT2A0FGR8 921 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 PHF20L1A8MW92 1017 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 TDP2O95551 362 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 ADCY5O95622 1261 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 BMP3P12645 472 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 TNNI2P48788 182 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 IQCB1Q15051 598 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
ATM-226ENST00000638443 NBPF12Q5TAG4 269 aaPredicted RBP11.23□□□□□ -0.61
ATM-226ENST00000638443 ANGEL2Q5VTE6 544 aaKnown RBP11.23□□□□□ -0.61
ATM-226ENST00000638443 GALNT17Q6IS24 598 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 GJA10Q969M2 543 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 GMCL1Q96IK5 515 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 UIMC1Q96RL1 719 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 P2RX7Q99572 595 aaKnown RBP11.23□□□□□ -0.61
ATM-226ENST00000638443 DEFB129Q9H1M3 183 aa11.23□□□□□ -0.61
ATM-226ENST00000638443 SLC37A4O43826 429 aa11.22□□□□□ -0.61
ATM-226ENST00000638443 YBX3P16989 372 aaKnown RBP eCLIP11.22□□□□□ -0.61
ATM-226ENST00000638443 EPS15P42566 896 aa11.22□□□□□ -0.61
ATM-226ENST00000638443 KRT25Q7Z3Z0 450 aa11.22□□□□□ -0.61
ATM-226ENST00000638443 APBB1IPQ7Z5R6 666 aaPredicted RBP11.22□□□□□ -0.61
ATM-226ENST00000638443 NEK8Q86SG6 692 aa11.22□□□□□ -0.61
ATM-226ENST00000638443 DHX40Q8IX18 779 aaKnown RBP11.22□□□□□ -0.61
ATM-226ENST00000638443 DPF2Q92785 391 aa11.22□□□□□ -0.61
ATM-226ENST00000638443 FERMT2Q96AC1 680 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms