RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 STX10O60499 249 aa24.23■■□□□ 1.47
CLN6-224ENST00000638076 AEBP2Q6ZN18 517 aaPredicted RBP24.23■■□□□ 1.47
CLN6-224ENST00000638076 FAM198AQ9UFP1 575 aa24.23■■□□□ 1.47
CLN6-224ENST00000638076 PPP1R11O60927 126 aaPredicted RBP24.22■■□□□ 1.47
CLN6-224ENST00000638076 PBX1P40424 430 aa24.22■■□□□ 1.47
CLN6-224ENST00000638076 SYT10Q6XYQ8 523 aa24.22■■□□□ 1.47
CLN6-224ENST00000638076 IGSF22Q8N9C0 903 aa24.22■■□□□ 1.47
CLN6-224ENST00000638076 TXKP42681 527 aa24.22■■□□□ 1.47
CLN6-224ENST00000638076 HDLBPQ00341 1268 aaKnown RBP24.22■■□□□ 1.47
CLN6-224ENST00000638076 PPP1R18Q6NYC8 613 aa24.22■■□□□ 1.47
CLN6-224ENST00000638076 ADSSL1Q8N142 457 aa24.22■■□□□ 1.47
CLN6-224ENST00000638076 IDI2Q9BXS1 227 aa24.22■■□□□ 1.47
CLN6-224ENST00000638076 MAGEF1Q9HAY2 307 aa24.22■■□□□ 1.47
CLN6-224ENST00000638076 RIC8AQ9NPQ8 531 aa24.22■■□□□ 1.47
CLN6-224ENST00000638076 GREB1LQ9C091 1923 aaPredicted RBP24.22■■□□□ 1.47
CLN6-224ENST00000638076 SCN9AQ15858 1988 aa24.22■■□□□ 1.47
CLN6-224ENST00000638076 CCT6AP40227 531 aaKnown RBP24.21■■□□□ 1.47
CLN6-224ENST00000638076 KRT31Q15323 416 aa24.21■■□□□ 1.47
CLN6-224ENST00000638076 AOC3Q16853 763 aa24.21■■□□□ 1.47
CLN6-224ENST00000638076 PPP4R3BQ5MIZ7 849 aa24.21■■□□□ 1.47
CLN6-224ENST00000638076 ZSCAN29Q8IWY8 852 aaPredicted RBP24.21■■□□□ 1.47
CLN6-224ENST00000638076 MTMR9Q96QG7 549 aa24.21■■□□□ 1.47
CLN6-224ENST00000638076 PI4KBQ9UBF8 816 aa24.21■■□□□ 1.47
CLN6-224ENST00000638076 LIMA1Q9UHB6 759 aaKnown RBP24.21■■□□□ 1.47
CLN6-224ENST00000638076 GOLGB1Q14789 3259 aaKnown RBP24.21■■□□□ 1.47
CLN6-224ENST00000638076 USP17L10C9JJH3 530 aa24.21■■□□□ 1.47
CLN6-224ENST00000638076 AKR1B15C9JRZ8 316 aaPredicted RBP24.21■■□□□ 1.47
CLN6-224ENST00000638076 CALCRLQ16602 461 aa24.21■■□□□ 1.47
CLN6-224ENST00000638076 SHROOM1Q2M3G4 852 aaPredicted RBP24.21■■□□□ 1.47
CLN6-224ENST00000638076 REXO1L1PQ8IX06 675 aa24.21■■□□□ 1.47
CLN6-224ENST00000638076 CNKSR1Q969H4 720 aa24.21■■□□□ 1.47
CLN6-224ENST00000638076 ZBTB5O15062 677 aa24.2■■□□□ 1.46
CLN6-224ENST00000638076 EDIL3O43854 480 aa24.2■■□□□ 1.46
CLN6-224ENST00000638076 RHOBTB3O94955 611 aa24.2■■□□□ 1.46
CLN6-224ENST00000638076 RXRBP28702 533 aa24.2■■□□□ 1.46
CLN6-224ENST00000638076 CERKLQ49MI3 558 aaPredicted RBP24.2■■□□□ 1.46
CLN6-224ENST00000638076 MMTAG2Q9BU76 263 aaKnown RBP24.2■■□□□ 1.46
CLN6-224ENST00000638076 MYH4Q9Y623 1939 aa24.2■■□□□ 1.46
CLN6-224ENST00000638076 LRRC10BA6NIK2 292 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 ZSCAN12O43309 604 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 SLC37A4O43826 429 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 RAD21O60216 631 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 TDP2O95551 362 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 TUBB4AP04350 444 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 TNNI2P48788 182 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 SPAG1Q07617 926 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 RBL2Q08999 1139 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 UBE2SQ16763 222 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 TCP11X2Q5H9J9 407 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 SH3BP5LQ7L8J4 393 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 PPFIBP1Q86W92 1011 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 SERPINA10Q9UK55 444 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 TRIM49BA6NDI0 452 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 EEF2P13639 858 aaKnown RBP24.19■■□□□ 1.46
CLN6-224ENST00000638076 CREBRFQ8IUR6 639 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 PPP2R2CQ9Y2T4 447 aa24.19■■□□□ 1.46
CLN6-224ENST00000638076 KCNJ18B7U540 433 aa24.18■■□□□ 1.46
CLN6-224ENST00000638076 N4BP3O15049 544 aa24.18■■□□□ 1.46
CLN6-224ENST00000638076 KCNJ12Q14500 433 aa24.18■■□□□ 1.46
CLN6-224ENST00000638076 GIMAP8Q8ND71 665 aaPredicted RBP24.18■■□□□ 1.46
CLN6-224ENST00000638076 CPLX3Q8WVH0 158 aa24.18■■□□□ 1.46
CLN6-224ENST00000638076 MTMR8Q96EF0 704 aa24.18■■□□□ 1.46
CLN6-224ENST00000638076 TRIM34Q9BYJ4 488 aa24.18■■□□□ 1.46
CLN6-224ENST00000638076 SIPA1L1O43166 1804 aa24.18■■□□□ 1.46
CLN6-224ENST00000638076 ANKRD20A12PQ8NF67 263 aa24.18■■□□□ 1.46
CLN6-224ENST00000638076 ANKRD7Q92527 254 aa24.18■■□□□ 1.46
CLN6-224ENST00000638076 CUL5Q93034 780 aa24.18■■□□□ 1.46
CLN6-224ENST00000638076 CALML4Q96GE6 196 aa24.18■■□□□ 1.46
CLN6-224ENST00000638076 PANX2Q96RD6 677 aa24.18■■□□□ 1.46
CLN6-224ENST00000638076 TRIM9Q9C026 710 aa24.18■■□□□ 1.46
CLN6-224ENST00000638076 VPS16Q9H269 839 aa24.18■■□□□ 1.46
CLN6-224ENST00000638076 H7C1D1 291 aa24.17■■□□□ 1.46
CLN6-224ENST00000638076 CLK2P49760 499 aaKnown RBP24.17■■□□□ 1.46
CLN6-224ENST00000638076 COPB1P53618 953 aaKnown RBP24.17■■□□□ 1.46
CLN6-224ENST00000638076 NCBP1Q09161 790 aaKnown RBP24.17■■□□□ 1.46
CLN6-224ENST00000638076 SEMA3FQ13275 785 aa24.17■■□□□ 1.46
CLN6-224ENST00000638076 STIM1Q13586 685 aa24.17■■□□□ 1.46
CLN6-224ENST00000638076 SYCP1Q15431 976 aa24.17■■□□□ 1.46
CLN6-224ENST00000638076 C7orf43Q8WVR3 580 aa24.17■■□□□ 1.46
CLN6-224ENST00000638076 KANSL2Q9H9L4 492 aa24.17■■□□□ 1.46
CLN6-224ENST00000638076 TAB2Q9NYJ8 693 aa24.17■■□□□ 1.46
CLN6-224ENST00000638076 LRWD1Q9UFC0 647 aa24.17■■□□□ 1.46
CLN6-224ENST00000638076 PMS1P54277 932 aaKnown RBP24.17■■□□□ 1.46
CLN6-224ENST00000638076 ETF1P62495 437 aaKnown RBP24.17■■□□□ 1.46
CLN6-224ENST00000638076 TOGARAM2Q6ZUX3 1019 aa24.17■■□□□ 1.46
CLN6-224ENST00000638076 MKL1Q969V6 931 aa24.17■■□□□ 1.46
CLN6-224ENST00000638076 NYAP2Q9P242 653 aa24.17■■□□□ 1.46
CLN6-224ENST00000638076 TNS1Q9HBL0 1735 aaKnown RBP24.17■■□□□ 1.46
CLN6-224ENST00000638076 SLC1A4P43007 532 aa24.16■■□□□ 1.46
CLN6-224ENST00000638076 FXR2P51116 673 aaKnown RBP eCLIP24.16■■□□□ 1.46
CLN6-224ENST00000638076 MRPL12P52815 198 aaKnown RBP24.16■■□□□ 1.46
CLN6-224ENST00000638076 SLC15A2Q16348 729 aa24.16■■□□□ 1.46
CLN6-224ENST00000638076 TMEM266Q2M3C6 531 aa24.16■■□□□ 1.46
CLN6-224ENST00000638076 TRIM65Q6PJ69 517 aa24.16■■□□□ 1.46
CLN6-224ENST00000638076 C7orf25Q9BPX7 421 aa24.16■■□□□ 1.46
CLN6-224ENST00000638076 ITIH6Q6UXX5 1313 aa24.16■■□□□ 1.46
CLN6-224ENST00000638076 NPM3O75607 178 aaKnown RBP24.16■■□□□ 1.46
CLN6-224ENST00000638076 NAA30Q147X3 362 aaPredicted RBP24.16■■□□□ 1.46
CLN6-224ENST00000638076 TATDN1Q6P1N9 297 aa24.16■■□□□ 1.46
CLN6-224ENST00000638076 PSTPIP2Q9H939 334 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms