RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 H7C0C1 242 aa17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 GIGYF1O75420 1035 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 DEXIO95424 95 aa17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 ATP5OP48047 213 aa17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 ACCSLQ4AC99 568 aa17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 GLT8D2Q9H1C3 349 aa17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 ATF5Q9Y2D1 282 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-258ENST00000638029 RLBP1P12271 317 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 PMS1P54277 932 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 KRT27Q7Z3Y8 459 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 LINS1Q8NG48 757 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 SNX25Q9H3E2 840 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 RAB20Q9NX57 234 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 SGK1O00141 431 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 EEF1GP26641 437 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 TRIM14Q14142 442 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 V9GY48 417 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 MAST3O60307 1309 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 UBE3AQ05086 875 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 PPP1R9AQ9ULJ8 1098 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 ALDH1B1P30837 517 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 EIF4A2Q14240 407 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 SUPT20HQ8NEM7 779 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 ATP6V0A1Q93050 837 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 TRIM55Q9BYV6 548 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 HESX1Q9UBX0 185 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 MYL5Q02045 173 aa17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 CAPRIN1Q14444 709 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 LSM14BQ9BX40 385 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-258ENST00000638029 N4BP1O75113 896 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 MYL3P08590 195 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 U2AF1L4Q8WU68 220 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 SLC12A6Q9UHW9 1150 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 K7ENM7 598 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 RAB44Q7Z6P3 723 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 RGS16O15492 202 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 RINT1Q6NUQ1 792 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 POLR3CQ9BUI4 534 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 ATG3Q9NT62 314 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 DPYSL4O14531 572 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 ATL3Q6DD88 541 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 SPICE1Q8N0Z3 855 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 RPGRIP1Q96KN7 1286 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 TTC1Q99614 292 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 DCAF4L1Q3SXM0 396 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 KRT71Q3SY84 523 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 SNX19Q92543 992 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 MYL10Q9BUA6 226 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 PPFIA4O75335 1185 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 TMEM191BP0C7N4 346 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 SLC38A10Q9HBR0 1119 aa17.8■□□□□ 0.44
CACNA1A-258ENST00000638029 HIP1RO75146 1068 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 PMLP29590 882 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 ADCY7P51828 1080 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 PABPC4Q13310 644 aaKnown RBP eCLIP17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 LRRC47Q8N1G4 583 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 CCDC127Q96BQ5 260 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 THAP12O43422 761 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 PALMDQ9NP74 551 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 TAB2Q9NYJ8 693 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 TUBBP07437 444 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 ANXA13P27216 316 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 EEF1DP29692 281 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 PHBP35232 272 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 POLA2Q14181 598 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 SLC9C1Q4G0N8 1177 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 NAA35Q5VZE5 725 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 CMTR1Q8N1G2 835 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 PI4K2BQ8TCG2 481 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 FAM207AQ9NSI2 230 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 PRXQ9BXM0 1461 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 SECISBP2LQ93073 1101 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 HAUS1Q96CS2 278 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 DCAF5Q96JK2 942 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 SUPT3HB4E1H0 165 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 OSBPP22059 807 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 HSP90AA5PQ58FG0 334 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 RAPGEF5Q92565 580 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 SPATS2Q86XZ4 545 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 DOLKQ9UPQ8 538 aa17.79■□□□□ 0.44
CACNA1A-258ENST00000638029 YWHAEP62258 255 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 UBXN2AP68543 259 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 NUP58Q9BVL2 599 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 DPH5Q9H2P9 285 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 UHRF1BP1LA0JNW5 1464 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 PDE6BP35913 854 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 RRAGAQ7L523 313 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 TIMM10P62072 90 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 DNAAF3Q8N9W5 541 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 PHKBQ93100 1093 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 SMAD5Q99717 465 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 PCDHB15Q9Y5E8 787 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 LRRD1A4D1F6 860 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 CPA1P15085 419 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 YWHAHQ04917 246 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 RWDD4Q6NW29 188 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 FAM149B1Q96BN6 582 aa17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 BRD2P25440 801 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-258ENST00000638029 PAK1Q13153 545 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms