RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 GAS7O60861 476 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 SCARA5Q6ZMJ2 495 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 PI4K2BQ8TCG2 481 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 GBP5Q96PP8 586 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 CARD6Q9BX69 1037 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 SLC52A2Q9HAB3 445 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 ATF5Q9Y2D1 282 aaPredicted RBP18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 BCAMP50895 628 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 ADKP55263 362 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 LIG3P49916 1009 aa18.58■□□□□ 0.57
CACNA1A-253ENST00000637927 SDCCAG3Q96C92 435 aa18.58■□□□□ 0.57
CACNA1A-253ENST00000637927 THOC1Q96FV9 657 aaKnown RBP18.58■□□□□ 0.57
CACNA1A-253ENST00000637927 ZNF202O95125 648 aa18.58■□□□□ 0.57
CACNA1A-253ENST00000637927 POLGP54098 1239 aaPredicted RBP18.58■□□□□ 0.57
CACNA1A-253ENST00000637927 MFSD14BQ5SR56 506 aa18.58■□□□□ 0.57
CACNA1A-253ENST00000637927 ASXL2Q76L83 1435 aa18.58■□□□□ 0.57
CACNA1A-253ENST00000637927 TRPM2O94759 1503 aa18.58■□□□□ 0.57
CACNA1A-253ENST00000637927 STX2P32856 288 aa18.58■□□□□ 0.56
CACNA1A-253ENST00000637927 HIF1AQ16665 826 aa18.58■□□□□ 0.56
CACNA1A-253ENST00000637927 NONOQ15233 471 aaKnown RBP eCLIP18.58■□□□□ 0.56
CACNA1A-253ENST00000637927 SECISBP2LQ93073 1101 aaKnown RBP18.58■□□□□ 0.56
CACNA1A-253ENST00000637927 GTPBP6O43824 516 aaPredicted RBP18.58■□□□□ 0.56
CACNA1A-253ENST00000637927 DPY19L2Q6NUT2 758 aa18.58■□□□□ 0.56
CACNA1A-253ENST00000637927 NUDCD3Q8IVD9 361 aa18.58■□□□□ 0.56
CACNA1A-253ENST00000637927 HAUS1Q96CS2 278 aa18.58■□□□□ 0.56
CACNA1A-253ENST00000637927 CAPN15O75808 1086 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 MYL1P05976 194 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 C2CD5Q86YS7 1000 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 SARS2Q9NP81 518 aaKnown RBP18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 KLHL30Q0D2K2 578 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 POSTNQ15063 836 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 APPBP2Q92624 585 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 TAOK1Q7L7X3 1001 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 GPBP1Q86WP2 473 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 CFAP61Q8NHU2 1237 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 CARD14Q9BXL6 1004 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 TNNC2P02585 160 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 YWHAHQ04917 246 aaPredicted RBP18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 MARCH10Q8NA82 808 aaPredicted RBP18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 SYTL2Q9HCH5 934 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 HEXIM1O94992 359 aaKnown RBP18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 ACTN1P12814 892 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 P4HA1P13674 534 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 CC2D2BQ6DHV5 1058 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 NLRP7Q8WX94 980 aa18.57■□□□□ 0.56
CACNA1A-253ENST00000637927 KCNK3O14649 394 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 CBX8Q9HC52 389 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 EEF1GP26641 437 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 EPHB1P54762 984 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 ZNF507Q8TCN5 953 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 ARHGEF1Q92888 912 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 CFLARO15519 480 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 MYL3P08590 195 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 RAPGEF5Q92565 580 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 ATG3Q9NT62 314 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 TYW5A2RUC4 315 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 KCNQ3O43525 872 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 CACNB1Q02641 598 aaPredicted RBP18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 CDO1Q16878 200 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 LPIN2Q92539 896 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 TMEM87BQ96K49 555 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 SERTAD1Q9UHV2 236 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 CLCA2Q9UQC9 943 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 RAPGEF6Q8TEU7 1601 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 TRIP13Q15645 432 aaPredicted RBP18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 NEUROG2Q9H2A3 272 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 SLC13A4Q9UKG4 626 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 ERBB3P21860 1342 aa18.56■□□□□ 0.56
CACNA1A-253ENST00000637927 RPRD2Q5VT52 1461 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 A6NJR5 290 aa18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 SSTR3P32745 418 aaPredicted RBP18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 PPARAQ07869 468 aa18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 CAPRIN1Q14444 709 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 FAM149B1Q96BN6 582 aa18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 ZNF668Q96K58 619 aaPredicted RBP18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 RNF8O76064 485 aa18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 KRT10P13645 584 aa18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 YWHAGP61981 247 aaKnown RBP eCLIP18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 RWDD4Q6NW29 188 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 PCIF1Q9H4Z3 704 aa18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 CYP4A11Q02928 519 aa18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 PRPSAP1Q14558 356 aa18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 SFMBT2Q5VUG0 894 aa18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 ZBTB40Q9NUA8 1239 aa18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 ZKSCAN5Q9Y2L8 839 aa18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 A2MP01023 1474 aa18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 HOOK2Q96ED9 719 aa18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 PCDHB4Q9Y5E5 795 aa18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 TLR3O15455 904 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 CPSF3Q9UKF6 684 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-253ENST00000637927 RSBN1LQ6PCB5 846 aaPredicted RBP18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 SIX5Q8N196 739 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 CAPN10Q9HC96 672 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 BCRP11274 1271 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 PDE6BP35913 854 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 VWA3BQ502W6 1294 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 PARP10Q53GL7 1025 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 PPM1KQ8N3J5 372 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 FAF1Q9UNN5 650 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms