RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-223ENST00000637293 FSHRP23945 695 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 SMARCA1P28370 1054 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 ID4P47928 161 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 LSSP48449 732 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 PSEN2P49810 448 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 CACNB3P54284 484 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 SNX16P57768 344 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 ERVK-21P61565 698 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 BLMHQ13867 455 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 ZNF460Q14592 562 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 ARID5BQ14865 1188 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 PCBP2Q15366 365 aaKnown RBP eCLIP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 PLA2G4EQ3MJ16 856 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 RILPL1Q5EBL4 403 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 MFSD4BQ5TF39 518 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 PIK3R6Q5UE93 754 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 ISM2Q6H9L7 571 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 HIBCHQ6NVY1 386 aaPredicted RBP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 ZCCHC8Q6NZY4 707 aaKnown RBP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 PGBD2Q6P3X8 592 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 DARS2Q6PI48 645 aaKnown RBP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 CPLX2Q6PUV4 134 aaKnown RBP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 B3GNT9Q6UX72 402 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 DSTYKQ6XUX3 929 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 LRRC69Q6ZNQ3 347 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 BICDL1Q6ZP65 573 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 RFX8Q6ZV50 586 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 FKBP9P1Q75LS8 142 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 PDZD4Q76G19 769 aaPredicted RBP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 NLRC3Q7RTR2 1065 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 MAMDC2Q7Z304 686 aaPredicted RBP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 GALNT5Q7Z7M9 940 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 TBC1D1Q86TI0 1168 aaPredicted RBP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 ERC1Q8IUD2 1116 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 C7orf61Q8IZ16 206 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 MYCT1Q8N699 235 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 TEX9Q8N6V9 391 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 LSMEM1Q8N8F7 131 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 ARL10Q8N8L6 244 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 ANKK1Q8NFD2 765 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 SLC30A5Q8TAD4 765 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 SLC7A14Q8TBB6 771 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 NELL1Q92832 810 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 TBC1D20Q96BZ9 403 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 TBC1D31Q96DN5 1066 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 TRIM44Q96DX7 344 aaPredicted RBP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 TRIM11Q96F44 468 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 UBXN10Q96LJ8 280 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 ZSCAN31Q96LW9 406 aaPredicted RBP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 TIGD1Q96MW7 591 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 DCBLD2Q96PD2 775 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 CDK15Q96Q40 435 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 TAAR9Q96RI9 348 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 IWS1Q96ST2 819 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 RMDN3Q96TC7 470 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 TREX2Q9BQ50 279 aaPredicted RBP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 FHDC1Q9C0D6 1143 aaPredicted RBP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 NUP62CLQ9H1M0 184 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 SLC52A2Q9HAB3 445 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 CD248Q9HCU0 757 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 LATS2Q9NRM7 1088 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 EPS15L1Q9UBC2 864 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 CCDC39Q9UFE4 941 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 SLC13A4Q9UKG4 626 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 ZNF214Q9UL59 606 aaPredicted RBP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 PPP1R9AQ9ULJ8 1098 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 PCDHB10Q9UN67 800 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 HPS5Q9UPZ3 1129 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 DNM3Q9UQ16 869 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 VPS9D1Q9Y2B5 631 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 GPR52Q9Y2T5 361 aa3.03□□□□□ -1.92
GABRB3-223ENST00000637293 RRP7AQ9Y3A4 280 aaKnown RBP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 MAGED1Q9Y5V3 778 aaPredicted RBP3.03□□□□□ -1.92
GABRB3-223ENST00000637293 PRR36Q9H6K5 1346 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 LTBP3Q9NS15 1303 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.02□□□□□ -1.93
GABRB3-223ENST00000637293 RRN3P2A6NIE6 340 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 M0R2C6 588 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 FZD9O00144 591 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 NOP56O00567 594 aaKnown RBP3.02□□□□□ -1.93
GABRB3-223ENST00000637293 TNFRSF10CO14798 259 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 GRIN3BO60391 1043 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 PAGE1O75459 146 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 TIPRLO75663 272 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 GFPT2O94808 682 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 HTR3BO95264 441 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 CYP11A1P05108 521 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 MYCLP12524 364 aaPredicted RBP3.02□□□□□ -1.93
GABRB3-223ENST00000637293 RAC2P15153 192 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 NME1P15531 152 aaKnown RBP3.02□□□□□ -1.93
GABRB3-223ENST00000637293 MX2P20592 715 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 HOXC13P31276 330 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 KIF5BP33176 963 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 PPM1AP35813 382 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 GRIK1P39086 918 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 TXLNAP40222 546 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 PBX2P40425 430 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 ADCYAP1R1P41586 468 aa3.02□□□□□ -1.93
GABRB3-223ENST00000637293 ATXN1P54253 815 aaKnown RBP3.02□□□□□ -1.93
GABRB3-223ENST00000637293 NRLP54845 237 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms