RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 CRNKL1Q9BZJ0 848 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-236ENST00000637117 ARHGEF10LQ9HCE6 1279 aa11.09□□□□□ -0.63
CACNA1A-236ENST00000637117 TMX2Q9Y320 296 aa11.09□□□□□ -0.63
CACNA1A-236ENST00000637117 TTC28Q96AY4 2481 aa11.09□□□□□ -0.63
CACNA1A-236ENST00000637117 ZNF236Q9UL36 1845 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 A0A1W2PQ45 241 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 A0A1W2PQY0 241 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 DCDC2CA8MYV0 355 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 TNFRSF10AO00220 468 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 PGK2P07205 417 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 CYP2D6P10635 497 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 TAL1P17542 331 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 RFX1P22670 979 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 FAAP100Q0VG06 881 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 TTF1Q15361 905 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 LCE2DQ5TA82 110 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 SLC9C2Q5TAH2 1124 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 ZKSCAN2Q63HK3 967 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 USP38Q8NB14 1042 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 SLC44A5Q8NCS7 719 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 SDR42E1Q8WUS8 393 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 TOX2Q96NM4 488 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 TSEN34Q9BSV6 310 aaKnown RBP11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 PPP1R12CQ9BZL4 782 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 ZNF576Q9H609 170 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 VCPKMTQ9H867 229 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 SWAP70Q9UH65 585 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 ADAMTS5Q9UNA0 930 aa11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 DIS3Q9Y2L1 958 aaKnown RBP11.08□□□□□ -0.64
CACNA1A-236ENST00000637117 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 WDR46O15213 610 aaKnown RBP11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 ZNF865P0CJ78 1059 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 AKR1A1P14550 325 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 AKR1B1P15121 316 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 PDE6AP16499 860 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 STAT3P40763 770 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 KCTD2Q14681 263 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 ZNF792Q3KQV3 632 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 ANKRD33Q7Z3H0 272 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 AACSQ86V21 672 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 RIOX2Q8IUF8 465 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 SCUBE3Q8IX30 993 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 NUP133Q8WUM0 1156 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 TIFAQ96CG3 184 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 THAP11Q96EK4 314 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 DYNLL2Q96FJ2 89 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 SH2D4AQ9H788 454 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 DCP1AQ9NPI6 582 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 MYO9BQ13459 2157 aa11.07□□□□□ -0.64
CACNA1A-236ENST00000637117 ADAMTS4O75173 837 aa11.06□□□□□ -0.64
CACNA1A-236ENST00000637117 TIMP1P01033 207 aa11.06□□□□□ -0.64
CACNA1A-236ENST00000637117 JUNDP17535 347 aa11.06□□□□□ -0.64
CACNA1A-236ENST00000637117 ACLYP53396 1101 aa11.06□□□□□ -0.64
CACNA1A-236ENST00000637117 ICA1Q05084 483 aa11.06□□□□□ -0.64
CACNA1A-236ENST00000637117 SEMA3FQ13275 785 aa11.06□□□□□ -0.64
CACNA1A-236ENST00000637117 CLEC10AQ8IUN9 316 aa11.06□□□□□ -0.64
CACNA1A-236ENST00000637117 PPM1EQ8WY54 764 aa11.06□□□□□ -0.64
CACNA1A-236ENST00000637117 CCDC17Q96LX7 622 aa11.06□□□□□ -0.64
CACNA1A-236ENST00000637117 UCN2Q96RP3 112 aa11.06□□□□□ -0.64
CACNA1A-236ENST00000637117 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.06□□□□□ -0.64
CACNA1A-236ENST00000637117 STARD7Q9NQZ5 370 aa11.06□□□□□ -0.64
CACNA1A-236ENST00000637117 CNPY2Q9Y2B0 182 aa11.06□□□□□ -0.64
CACNA1A-236ENST00000637117 ZNF532Q9HCE3 1301 aa11.06□□□□□ -0.64
CACNA1A-236ENST00000637117 TCRBV5S4A2TA0A5A2 114 aa11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 PALM3A6NDB9 673 aaPredicted RBP11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 VWA5AO00534 786 aa11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 F12P00748 615 aaPredicted RBP11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 CDK8P49336 464 aa11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 KCNA10Q16322 511 aa11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 MFSD5Q6N075 450 aa11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 CCDC129Q6ZRS4 1044 aa11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 ERC1Q8IUD2 1116 aa11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 LCORLQ8N3X6 602 aa11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 KLHDC9Q8NEP7 349 aa11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 ATXN2LQ8WWM7 1075 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 LENG1Q96BZ8 264 aaPredicted RBP11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 GAS2L1Q99501 681 aaPredicted RBP11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 FBXO28Q9NVF7 368 aa11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 MAP10Q9P2G4 905 aa11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 FAM184BQ9ULE4 1060 aa11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 EXOC6BQ9Y2D4 811 aa11.05□□□□□ -0.64
CACNA1A-236ENST00000637117 A0A0G2JMZ2 1700 aa11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 GRXCR1A8MXD5 290 aa11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 PRKAB2O43741 272 aa11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 EEF2P13639 858 aaKnown RBP11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 COPB2P35606 906 aa11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 NR1H3Q13133 447 aa11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 PPIGQ13427 754 aaKnown RBP eCLIP11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 PTPRNQ16849 979 aa11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 TMEM240Q5SV17 173 aa11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 CCSAPQ6IQ19 270 aaPredicted RBP11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 CCDC174Q6PII3 467 aa11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 C16orf59Q7L2K0 433 aa11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 ITPRIPQ8IWB1 547 aa11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 MSL3Q8N5Y2 521 aaKnown RBP11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 KCTD17Q8N5Z5 321 aa11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 PBX4Q9BYU1 374 aa11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 ARMT1Q9H993 441 aa11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 KANSL2Q9H9L4 492 aa11.04□□□□□ -0.64
CACNA1A-236ENST00000637117 IL1RAPL2Q9NP60 686 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms